RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 NPIPB7O75200 414 aa11.87□□□□□ -0.51
CLK3-218ENST00000566926 TNFAIP8O95379 198 aa11.87□□□□□ -0.51
CLK3-218ENST00000566926 MT-ATP6P00846 226 aa11.87□□□□□ -0.51
CLK3-218ENST00000566926 KLK2P20151 261 aa11.87□□□□□ -0.51
CLK3-218ENST00000566926 GGT2P36268 569 aa11.87□□□□□ -0.51
CLK3-218ENST00000566926 CSNK2BP67870 215 aa11.87□□□□□ -0.51
CLK3-218ENST00000566926 FOXD4Q12950 439 aaPredicted RBP11.87□□□□□ -0.51
CLK3-218ENST00000566926 SLC17A1Q14916 467 aa11.87□□□□□ -0.51
CLK3-218ENST00000566926 PTGES3Q15185 160 aaKnown RBP11.87□□□□□ -0.51
CLK3-218ENST00000566926 BEX5Q5H9J7 111 aa11.87□□□□□ -0.51
CLK3-218ENST00000566926 FBXW9Q5XUX1 488 aa11.87□□□□□ -0.51
CLK3-218ENST00000566926 SLC27A4Q6P1M0 643 aa11.87□□□□□ -0.51
CLK3-218ENST00000566926 CASP12Q6UXS9 341 aa11.87□□□□□ -0.51
CLK3-218ENST00000566926 ZNF620Q6ZNG0 422 aa11.87□□□□□ -0.51
CLK3-218ENST00000566926 UBE2J2Q8N2K1 259 aa11.87□□□□□ -0.51
CLK3-218ENST00000566926 HSD17B8Q92506 261 aa11.87□□□□□ -0.51
CLK3-218ENST00000566926 ZC3HAV1LQ96H79 300 aaKnown RBP11.87□□□□□ -0.51
CLK3-218ENST00000566926 MUS81Q96NY9 551 aa11.87□□□□□ -0.51
CLK3-218ENST00000566926 SLC25A19Q9HC21 320 aa11.87□□□□□ -0.51
CLK3-218ENST00000566926 MEPEQ9NQ76 525 aaPredicted RBP11.87□□□□□ -0.51
CLK3-218ENST00000566926 IMPAD1Q9NX62 359 aa11.87□□□□□ -0.51
CLK3-218ENST00000566926 ITGB1BP2Q9UKP3 347 aa11.87□□□□□ -0.51
CLK3-218ENST00000566926 BLOC1S6Q9UL45 172 aa11.87□□□□□ -0.51
CLK3-218ENST00000566926 BAIAP2Q9UQB8 552 aa11.87□□□□□ -0.51
CLK3-218ENST00000566926 RASD1Q9Y272 281 aa11.87□□□□□ -0.51
CLK3-218ENST00000566926 ROS1P08922 2347 aa11.86□□□□□ -0.51
CLK3-218ENST00000566926 MAGEA13PA6NCF6 341 aa11.86□□□□□ -0.51
CLK3-218ENST00000566926 ZNF814B7Z6K7 855 aa11.86□□□□□ -0.51
CLK3-218ENST00000566926 M0R3G1 203 aa11.86□□□□□ -0.51
CLK3-218ENST00000566926 AKR7A3O95154 331 aa11.86□□□□□ -0.51
CLK3-218ENST00000566926 GNAO1P09471 354 aa11.86□□□□□ -0.51
CLK3-218ENST00000566926 DNASE1P24855 282 aa11.86□□□□□ -0.51
CLK3-218ENST00000566926 GPR4P46093 362 aa11.86□□□□□ -0.51
CLK3-218ENST00000566926 NR1H2P55055 460 aa11.86□□□□□ -0.51
CLK3-218ENST00000566926 PRPS1P60891 318 aa11.86□□□□□ -0.51
CLK3-218ENST00000566926 CXCR4P61073 352 aa11.86□□□□□ -0.51
CLK3-218ENST00000566926 TOP3AQ13472 1001 aaPredicted RBP11.86□□□□□ -0.51
CLK3-218ENST00000566926 FAM69AQ5T7M9 428 aa11.86□□□□□ -0.51
CLK3-218ENST00000566926 SLX4IPQ5VYV7 408 aa11.86□□□□□ -0.51
CLK3-218ENST00000566926 UGT2A3Q6UWM9 527 aa11.86□□□□□ -0.51
CLK3-218ENST00000566926 BHLHA15Q7RTS1 189 aaPredicted RBP11.86□□□□□ -0.51
CLK3-218ENST00000566926 OAFQ86UD1 273 aa11.86□□□□□ -0.51
CLK3-218ENST00000566926 TMEM99Q8N816 258 aa11.86□□□□□ -0.51
CLK3-218ENST00000566926 OR2T33Q8NG76 320 aa11.86□□□□□ -0.51
CLK3-218ENST00000566926 PFN4Q8NHR9 129 aa11.86□□□□□ -0.51
CLK3-218ENST00000566926 FANK1Q8TC84 345 aa11.86□□□□□ -0.51
CLK3-218ENST00000566926 SLC38A2Q96QD8 506 aa11.86□□□□□ -0.51
CLK3-218ENST00000566926 FKRPQ9H9S5 495 aa11.86□□□□□ -0.51
CLK3-218ENST00000566926 PRSS50Q9UI38 385 aa11.86□□□□□ -0.51
CLK3-218ENST00000566926 ST6GALNAC2Q9UJ37 374 aa11.86□□□□□ -0.51
CLK3-218ENST00000566926 ZNF229Q9UJW7 825 aa11.86□□□□□ -0.51
CLK3-218ENST00000566926 FLVCR1Q9Y5Y0 555 aa11.86□□□□□ -0.51
CLK3-218ENST00000566926 IGKV1D-42A0A075B6H8 117 aa11.85□□□□□ -0.51
CLK3-218ENST00000566926 KPNA4O00629 521 aaPredicted RBP11.85□□□□□ -0.51
CLK3-218ENST00000566926 PIP5K1CO60331 668 aa11.85□□□□□ -0.51
CLK3-218ENST00000566926 OR7A10O76100 309 aa11.85□□□□□ -0.51
CLK3-218ENST00000566926 HMGN1P05114 100 aa11.85□□□□□ -0.51
CLK3-218ENST00000566926 POU1F1P28069 291 aa11.85□□□□□ -0.51
CLK3-218ENST00000566926 POLR2IP36954 125 aaKnown RBP11.85□□□□□ -0.51
CLK3-218ENST00000566926 RPS5P46782 204 aaKnown RBP11.85□□□□□ -0.51
CLK3-218ENST00000566926 GIPRP48546 466 aa11.85□□□□□ -0.51
CLK3-218ENST00000566926 ISL1P61371 349 aa11.85□□□□□ -0.51
CLK3-218ENST00000566926 IL5RAQ01344 420 aa11.85□□□□□ -0.51
CLK3-218ENST00000566926 POU4F3Q15319 338 aa11.85□□□□□ -0.51
CLK3-218ENST00000566926 ZNF74Q16587 644 aa11.85□□□□□ -0.51
CLK3-218ENST00000566926 KCTD21Q4G0X4 260 aa11.85□□□□□ -0.51
CLK3-218ENST00000566926 SMARCD3Q6STE5 483 aa11.85□□□□□ -0.51
CLK3-218ENST00000566926 ABHD12BQ7Z5M8 362 aaPredicted RBP11.85□□□□□ -0.51
CLK3-218ENST00000566926 GPAT4Q86UL3 456 aa11.85□□□□□ -0.51
CLK3-218ENST00000566926 P2RY8Q86VZ1 359 aa11.85□□□□□ -0.51
CLK3-218ENST00000566926 OR9K2Q8NGE7 335 aa11.85□□□□□ -0.51
CLK3-218ENST00000566926 FBLIM1Q8WUP2 373 aa11.85□□□□□ -0.51
CLK3-218ENST00000566926 HDAC2Q92769 488 aaKnown RBP11.85□□□□□ -0.51
CLK3-218ENST00000566926 TMEM45BQ96B21 275 aa11.85□□□□□ -0.51
CLK3-218ENST00000566926 S100PBPQ96BU1 408 aa11.85□□□□□ -0.51
CLK3-218ENST00000566926 SLC25A36Q96CQ1 311 aa11.85□□□□□ -0.51
CLK3-218ENST00000566926 PIK3IP1Q96FE7 263 aa11.85□□□□□ -0.51
CLK3-218ENST00000566926 Q96MT0 163 aa11.85□□□□□ -0.51
CLK3-218ENST00000566926 GPA33Q99795 319 aa11.85□□□□□ -0.51
CLK3-218ENST00000566926 PLEKHF2Q9H8W4 249 aa11.85□□□□□ -0.51
CLK3-218ENST00000566926 NANSQ9NR45 359 aa11.85□□□□□ -0.51
CLK3-218ENST00000566926 C20orf141Q9NUB4 165 aa11.85□□□□□ -0.51
CLK3-218ENST00000566926 TBC1D23Q9NUY8 699 aa11.85□□□□□ -0.51
CLK3-218ENST00000566926 ASB6Q9NWX5 421 aa11.85□□□□□ -0.51
CLK3-218ENST00000566926 UBAP1Q9NZ09 502 aa11.85□□□□□ -0.51
CLK3-218ENST00000566926 UPB1Q9UBR1 384 aa11.85□□□□□ -0.51
CLK3-218ENST00000566926 MYRFQ9Y2G1 1151 aa11.85□□□□□ -0.51
CLK3-218ENST00000566926 CORINQ9Y5Q5 1042 aa11.85□□□□□ -0.51
CLK3-218ENST00000566926 HRNRQ86YZ3 2850 aaPredicted RBP11.85□□□□□ -0.51
CLK3-218ENST00000566926 CADP27708 2225 aa11.84□□□□□ -0.51
CLK3-218ENST00000566926 CIB4A0PJX0 185 aa11.84□□□□□ -0.51
CLK3-218ENST00000566926 OR6C65A6NJZ3 312 aa11.84□□□□□ -0.51
CLK3-218ENST00000566926 SNTNA6NMZ2 147 aa11.84□□□□□ -0.51
CLK3-218ENST00000566926 DEFB108AA8MXU0 73 aa11.84□□□□□ -0.51
CLK3-218ENST00000566926 CDC42EP2O14613 210 aa11.84□□□□□ -0.51
CLK3-218ENST00000566926 RAMP1O60894 148 aa11.84□□□□□ -0.51
CLK3-218ENST00000566926 NDUFB2O95178 105 aa11.84□□□□□ -0.51
CLK3-218ENST00000566926 SOX14O95416 240 aa11.84□□□□□ -0.51
CLK3-218ENST00000566926 RAF1P04049 648 aa11.84□□□□□ -0.51
CLK3-218ENST00000566926 HIST1H2ABP04908 130 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms