RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 PTDSS1P48651 473 aaKnown RBP12.9□□□□□ -0.34
RNF40-209ENST00000566703 BIDP55957 195 aa12.9□□□□□ -0.34
RNF40-209ENST00000566703 TMEM33P57088 247 aa12.9□□□□□ -0.34
RNF40-209ENST00000566703 MRPS11P82912 194 aaKnown RBP12.9□□□□□ -0.34
RNF40-209ENST00000566703 GALK2Q01415 458 aa12.9□□□□□ -0.34
RNF40-209ENST00000566703 DUSP7Q16829 419 aa12.9□□□□□ -0.34
RNF40-209ENST00000566703 MSMPQ1L6U9 139 aa12.9□□□□□ -0.34
RNF40-209ENST00000566703 DPPA2Q7Z7J5 298 aa12.9□□□□□ -0.34
RNF40-209ENST00000566703 PTOV1Q86YD1 416 aa12.9□□□□□ -0.34
RNF40-209ENST00000566703 DPP10Q8N608 796 aa12.9□□□□□ -0.34
RNF40-209ENST00000566703 SMYD1Q8NB12 490 aa12.9□□□□□ -0.34
RNF40-209ENST00000566703 NDUFAF1Q9Y375 327 aa12.9□□□□□ -0.34
RNF40-209ENST00000566703 SLC22A23A1A5C7 686 aa12.89□□□□□ -0.35
RNF40-209ENST00000566703 B4DSR2 109 aa12.89□□□□□ -0.35
RNF40-209ENST00000566703 M0R3H8 397 aa12.89□□□□□ -0.35
RNF40-209ENST00000566703 VIMP08670 466 aaKnown RBP12.89□□□□□ -0.35
RNF40-209ENST00000566703 OR8G3PP0DMU2 310 aa12.89□□□□□ -0.35
RNF40-209ENST00000566703 ACHEP22303 614 aa12.89□□□□□ -0.35
RNF40-209ENST00000566703 IL2RGP31785 369 aa12.89□□□□□ -0.35
RNF40-209ENST00000566703 ZNF74Q16587 644 aa12.89□□□□□ -0.35
RNF40-209ENST00000566703 ELFN2Q5R3F8 820 aa12.89□□□□□ -0.35
RNF40-209ENST00000566703 GKAP1Q5VSY0 366 aaPredicted RBP12.89□□□□□ -0.35
RNF40-209ENST00000566703 TTC33Q6PID6 262 aaPredicted RBP12.89□□□□□ -0.35
RNF40-209ENST00000566703 SLC35D2Q76EJ3 337 aa12.89□□□□□ -0.35
RNF40-209ENST00000566703 PATL1Q86TB9 770 aaKnown RBP12.89□□□□□ -0.35
RNF40-209ENST00000566703 WDFY1Q8IWB7 410 aa12.89□□□□□ -0.35
RNF40-209ENST00000566703 SKA3Q8IX90 412 aa12.89□□□□□ -0.35
RNF40-209ENST00000566703 GPR32P1Q8NGA4 272 aa12.89□□□□□ -0.35
RNF40-209ENST00000566703 OR6T1Q8NGN1 323 aa12.89□□□□□ -0.35
RNF40-209ENST00000566703 RDH5Q92781 318 aa12.89□□□□□ -0.35
RNF40-209ENST00000566703 SLC25A44Q96H78 314 aaPredicted RBP12.89□□□□□ -0.35
RNF40-209ENST00000566703 MPP4Q96JB8 637 aa12.89□□□□□ -0.35
RNF40-209ENST00000566703 SNX18Q96RF0 628 aa12.89□□□□□ -0.35
RNF40-209ENST00000566703 CGREF1Q99674 301 aa12.89□□□□□ -0.35
RNF40-209ENST00000566703 SLC19A3Q9BZV2 496 aa12.89□□□□□ -0.35
RNF40-209ENST00000566703 TPK1Q9H3S4 243 aa12.89□□□□□ -0.35
RNF40-209ENST00000566703 ZNF385DQ9H6B1 395 aa12.89□□□□□ -0.35
RNF40-209ENST00000566703 NANSQ9NR45 359 aa12.89□□□□□ -0.35
RNF40-209ENST00000566703 TAS2R5Q9NYW4 299 aa12.89□□□□□ -0.35
RNF40-209ENST00000566703 SLC7A8Q9UHI5 535 aa12.89□□□□□ -0.35
RNF40-209ENST00000566703 ZNF346Q9UL40 294 aaKnown RBP12.89□□□□□ -0.35
RNF40-209ENST00000566703 TRAPPC13A5PLN9 417 aa12.88□□□□□ -0.35
RNF40-209ENST00000566703 C11orf98E9PRG8 122 aa12.88□□□□□ -0.35
RNF40-209ENST00000566703 LYNX1G3V0Z9 82 aa12.88□□□□□ -0.35
RNF40-209ENST00000566703 TCF21O43680 179 aa12.88□□□□□ -0.35
RNF40-209ENST00000566703 LYPD3O95274 346 aa12.88□□□□□ -0.35
RNF40-209ENST00000566703 HIST1H2ABP04908 130 aa12.88□□□□□ -0.35
RNF40-209ENST00000566703 LYNX1P0DP58 116 aa12.88□□□□□ -0.35
RNF40-209ENST00000566703 SRP14P37108 136 aaKnown RBP12.88□□□□□ -0.35
RNF40-209ENST00000566703 GPR6P46095 362 aaPredicted RBP12.88□□□□□ -0.35
RNF40-209ENST00000566703 SELENOVP59797 346 aa12.88□□□□□ -0.35
RNF40-209ENST00000566703 RAB39AQ14964 217 aa12.88□□□□□ -0.35
RNF40-209ENST00000566703 TRIP10Q15642 601 aa12.88□□□□□ -0.35
RNF40-209ENST00000566703 CYP51A1Q16850 503 aa12.88□□□□□ -0.35
RNF40-209ENST00000566703 MMEL1Q495T6 779 aa12.88□□□□□ -0.35
RNF40-209ENST00000566703 NRN1LQ496H8 165 aa12.88□□□□□ -0.35
RNF40-209ENST00000566703 ENTPD8Q5MY95 495 aa12.88□□□□□ -0.35
RNF40-209ENST00000566703 LRFN4Q6PJG9 635 aa12.88□□□□□ -0.35
RNF40-209ENST00000566703 WDR88Q6ZMY6 472 aa12.88□□□□□ -0.35
RNF40-209ENST00000566703 HIST3H2AQ7L7L0 130 aa12.88□□□□□ -0.35
RNF40-209ENST00000566703 SLC22A24Q8N4F4 322 aa12.88□□□□□ -0.35
RNF40-209ENST00000566703 ADAMTS16Q8TE57 1224 aa12.88□□□□□ -0.35
RNF40-209ENST00000566703 RASSF5Q8WWW0 418 aa12.88□□□□□ -0.35
RNF40-209ENST00000566703 HIST1H2ACQ93077 130 aa12.88□□□□□ -0.35
RNF40-209ENST00000566703 ZNF566Q969W8 418 aa12.88□□□□□ -0.35
RNF40-209ENST00000566703 ZNF426Q9BUY5 554 aa12.88□□□□□ -0.35
RNF40-209ENST00000566703 RACGAP1Q9H0H5 632 aa12.88□□□□□ -0.35
RNF40-209ENST00000566703 PCDHAC1Q9H158 963 aa12.88□□□□□ -0.35
RNF40-209ENST00000566703 C1orf198Q9H425 327 aa12.88□□□□□ -0.35
RNF40-209ENST00000566703 GPR160Q9UJ42 338 aa12.88□□□□□ -0.35
RNF40-209ENST00000566703 ZNF229Q9UJW7 825 aa12.88□□□□□ -0.35
RNF40-209ENST00000566703 A0A0A6YYJ9 748 aa12.87□□□□□ -0.35
RNF40-209ENST00000566703 CENPBD1B2RD01 187 aa12.87□□□□□ -0.35
RNF40-209ENST00000566703 DHHO43323 396 aa12.87□□□□□ -0.35
RNF40-209ENST00000566703 RNF13O43567 381 aa12.87□□□□□ -0.35
RNF40-209ENST00000566703 SERPINI2O75830 405 aa12.87□□□□□ -0.35
RNF40-209ENST00000566703 FARS2O95363 451 aaKnown RBP12.87□□□□□ -0.35
RNF40-209ENST00000566703 CH25HO95992 272 aa12.87□□□□□ -0.35
RNF40-209ENST00000566703 PTHP01270 115 aa12.87□□□□□ -0.35
RNF40-209ENST00000566703 TFP02787 698 aa12.87□□□□□ -0.35
RNF40-209ENST00000566703 HPXP02790 462 aa12.87□□□□□ -0.35
RNF40-209ENST00000566703 COL8A2P25067 703 aa12.87□□□□□ -0.35
RNF40-209ENST00000566703 NPTX1Q15818 432 aa12.87□□□□□ -0.35
RNF40-209ENST00000566703 INTS11Q5TA45 600 aaKnown RBP12.87□□□□□ -0.35
RNF40-209ENST00000566703 DEF8Q6ZN54 512 aa12.87□□□□□ -0.35
RNF40-209ENST00000566703 DHDDSQ86SQ9 333 aa12.87□□□□□ -0.35
RNF40-209ENST00000566703 DYDC1Q8WWB3 177 aa12.87□□□□□ -0.35
RNF40-209ENST00000566703 ATP6V1G3Q96LB4 118 aa12.87□□□□□ -0.35
RNF40-209ENST00000566703 SYT3Q9BQG1 590 aa12.87□□□□□ -0.35
RNF40-209ENST00000566703 KAT8Q9H7Z6 458 aaKnown RBP12.87□□□□□ -0.35
RNF40-209ENST00000566703 TMEM38BQ9NVV0 291 aa12.87□□□□□ -0.35
RNF40-209ENST00000566703 DUSP13Q9UII6 198 aa12.87□□□□□ -0.35
RNF40-209ENST00000566703 TRIM33Q9UPN9 1127 aa12.87□□□□□ -0.35
RNF40-209ENST00000566703 STAB1Q9NY15 2570 aa12.87□□□□□ -0.35
RNF40-209ENST00000566703 MXRA5Q9NR99 2828 aa12.86□□□□□ -0.35
RNF40-209ENST00000566703 CPSF4LA6NMK7 179 aaKnown RBP12.86□□□□□ -0.35
RNF40-209ENST00000566703 ANGPT2O15123 496 aa12.86□□□□□ -0.35
RNF40-209ENST00000566703 BCL10O95999 233 aa12.86□□□□□ -0.35
RNF40-209ENST00000566703 THY1P04216 161 aa12.86□□□□□ -0.35
RNF40-209ENST00000566703 ASAH2BP0C7U1 165 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms