RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 LINC01356Q8N9X3 169 aa10.3□□□□□ -0.76
UBR1-206ENST00000566493 OR5J2Q8NH18 312 aa10.3□□□□□ -0.76
UBR1-206ENST00000566493 MRPL24Q96A35 216 aaKnown RBP10.3□□□□□ -0.76
UBR1-206ENST00000566493 SNX18Q96RF0 628 aa10.3□□□□□ -0.76
UBR1-206ENST00000566493 FOXB1Q99853 325 aa10.3□□□□□ -0.76
UBR1-206ENST00000566493 CPPED1Q9BRF8 314 aaPredicted RBP10.3□□□□□ -0.76
UBR1-206ENST00000566493 C19orf24Q9BVV8 132 aa10.3□□□□□ -0.76
UBR1-206ENST00000566493 TPK1Q9H3S4 243 aa10.3□□□□□ -0.76
UBR1-206ENST00000566493 SLC52A3Q9NQ40 469 aa10.3□□□□□ -0.76
UBR1-206ENST00000566493 LEF1Q9UJU2 399 aaPredicted RBP10.3□□□□□ -0.76
UBR1-206ENST00000566493 NDUFAF1Q9Y375 327 aa10.3□□□□□ -0.76
UBR1-206ENST00000566493 CPSF4LA6NMK7 179 aaKnown RBP10.29□□□□□ -0.76
UBR1-206ENST00000566493 LRRN3E7EW58 273 aa10.29□□□□□ -0.76
UBR1-206ENST00000566493 M0QX08 132 aa10.29□□□□□ -0.76
UBR1-206ENST00000566493 M0R3H8 397 aa10.29□□□□□ -0.76
UBR1-206ENST00000566493 ANGPT2O15123 496 aa10.29□□□□□ -0.76
UBR1-206ENST00000566493 CHP2O43745 196 aa10.29□□□□□ -0.76
UBR1-206ENST00000566493 LILRA1O75019 489 aa10.29□□□□□ -0.76
UBR1-206ENST00000566493 HIST1H2ABP04908 130 aa10.29□□□□□ -0.76
UBR1-206ENST00000566493 ZNF35P13682 527 aa10.29□□□□□ -0.76
UBR1-206ENST00000566493 ZNF14P17017 642 aaPredicted RBP10.29□□□□□ -0.76
UBR1-206ENST00000566493 SRP14P37108 136 aaKnown RBP10.29□□□□□ -0.76
UBR1-206ENST00000566493 GIPRP48546 466 aa10.29□□□□□ -0.76
UBR1-206ENST00000566493 ENTPD8Q5MY95 495 aa10.29□□□□□ -0.76
UBR1-206ENST00000566493 DLEU7Q6UYE1 221 aa10.29□□□□□ -0.76
UBR1-206ENST00000566493 LINC00114Q6XXX2 140 aa10.29□□□□□ -0.76
UBR1-206ENST00000566493 HIST3H2AQ7L7L0 130 aa10.29□□□□□ -0.76
UBR1-206ENST00000566493 PIWIL3Q7Z3Z3 882 aaKnown RBP10.29□□□□□ -0.76
UBR1-206ENST00000566493 DHDDSQ86SQ9 333 aa10.29□□□□□ -0.76
UBR1-206ENST00000566493 SLC30A8Q8IWU4 369 aa10.29□□□□□ -0.76
UBR1-206ENST00000566493 SLC26A7Q8TE54 656 aa10.29□□□□□ -0.76
UBR1-206ENST00000566493 HIST1H2ACQ93077 130 aa10.29□□□□□ -0.76
UBR1-206ENST00000566493 ARHGDIGQ99819 225 aa10.29□□□□□ -0.76
UBR1-206ENST00000566493 WFDC6Q9BQY6 131 aa10.29□□□□□ -0.76
UBR1-206ENST00000566493 SOX7Q9BT81 388 aa10.29□□□□□ -0.76
UBR1-206ENST00000566493 MRPL37Q9BZE1 423 aaKnown RBP10.29□□□□□ -0.76
UBR1-206ENST00000566493 NANSQ9NR45 359 aa10.29□□□□□ -0.76
UBR1-206ENST00000566493 TMEFF2Q9UIK5 374 aaPredicted RBP10.29□□□□□ -0.76
UBR1-206ENST00000566493 TRIM33Q9UPN9 1127 aa10.29□□□□□ -0.76
UBR1-206ENST00000566493 LYNX1G3V0Z9 82 aa10.28□□□□□ -0.76
UBR1-206ENST00000566493 RNF13O43567 381 aa10.28□□□□□ -0.76
UBR1-206ENST00000566493 FARS2O95363 451 aaKnown RBP10.28□□□□□ -0.76
UBR1-206ENST00000566493 CH25HO95992 272 aa10.28□□□□□ -0.76
UBR1-206ENST00000566493 LYNX1P0DP58 116 aa10.28□□□□□ -0.76
UBR1-206ENST00000566493 UMPSP11172 480 aa10.28□□□□□ -0.76
UBR1-206ENST00000566493 PCMT1P22061 227 aa10.28□□□□□ -0.76
UBR1-206ENST00000566493 PCBP3P57721 371 aaKnown RBP10.28□□□□□ -0.76
UBR1-206ENST00000566493 RIN1Q13671 783 aa10.28□□□□□ -0.76
UBR1-206ENST00000566493 RAB39AQ14964 217 aa10.28□□□□□ -0.76
UBR1-206ENST00000566493 DUSP7Q16829 419 aa10.28□□□□□ -0.76
UBR1-206ENST00000566493 TUSC1Q2TAM9 212 aa10.28□□□□□ -0.76
UBR1-206ENST00000566493 NHLRC1Q6VVB1 395 aa10.28□□□□□ -0.76
UBR1-206ENST00000566493 SLC35D2Q76EJ3 337 aa10.28□□□□□ -0.76
UBR1-206ENST00000566493 PATL1Q86TB9 770 aaKnown RBP10.28□□□□□ -0.76
UBR1-206ENST00000566493 PTOV1Q86YD1 416 aa10.28□□□□□ -0.76
UBR1-206ENST00000566493 OR6T1Q8NGN1 323 aa10.28□□□□□ -0.76
UBR1-206ENST00000566493 OR6X1Q8NH79 312 aa10.28□□□□□ -0.76
UBR1-206ENST00000566493 VANGL1Q8TAA9 524 aaPredicted RBP10.28□□□□□ -0.76
UBR1-206ENST00000566493 TMEM54Q969K7 222 aa10.28□□□□□ -0.76
UBR1-206ENST00000566493 ZNF566Q969W8 418 aa10.28□□□□□ -0.76
UBR1-206ENST00000566493 ATP6V1G3Q96LB4 118 aa10.28□□□□□ -0.76
UBR1-206ENST00000566493 SYT3Q9BQG1 590 aa10.28□□□□□ -0.76
UBR1-206ENST00000566493 GLTPQ9NZD2 209 aa10.28□□□□□ -0.76
UBR1-206ENST00000566493 SLC7A8Q9UHI5 535 aa10.28□□□□□ -0.76
UBR1-206ENST00000566493 ZNF346Q9UL40 294 aaKnown RBP10.28□□□□□ -0.76
UBR1-206ENST00000566493 A0A1W2PPW3 197 aa10.27□□□□□ -0.77
UBR1-206ENST00000566493 SLC22A23A1A5C7 686 aa10.27□□□□□ -0.77
UBR1-206ENST00000566493 TRAPPC13A5PLN9 417 aa10.27□□□□□ -0.77
UBR1-206ENST00000566493 KPNA4O00629 521 aaPredicted RBP10.27□□□□□ -0.77
UBR1-206ENST00000566493 OPN1SWP03999 348 aa10.27□□□□□ -0.77
UBR1-206ENST00000566493 SERPINA5P05154 406 aa10.27□□□□□ -0.77
UBR1-206ENST00000566493 IGFBP1P08833 259 aaPredicted RBP10.27□□□□□ -0.77
UBR1-206ENST00000566493 OR8G3PP0DMU2 310 aa10.27□□□□□ -0.77
UBR1-206ENST00000566493 TCN1P20061 433 aaPredicted RBP10.27□□□□□ -0.77
UBR1-206ENST00000566493 CD247P20963 164 aa10.27□□□□□ -0.77
UBR1-206ENST00000566493 IL2RGP31785 369 aa10.27□□□□□ -0.77
UBR1-206ENST00000566493 ALDH3B1P43353 468 aa10.27□□□□□ -0.77
UBR1-206ENST00000566493 GPR6P46095 362 aaPredicted RBP10.27□□□□□ -0.77
UBR1-206ENST00000566493 CDH15P55291 814 aa10.27□□□□□ -0.77
UBR1-206ENST00000566493 MTPNP58546 118 aa10.27□□□□□ -0.77
UBR1-206ENST00000566493 SELENOVP59797 346 aa10.27□□□□□ -0.77
UBR1-206ENST00000566493 SRSF2Q01130 221 aaKnown RBP10.27□□□□□ -0.77
UBR1-206ENST00000566493 ZP4Q12836 540 aa10.27□□□□□ -0.77
UBR1-206ENST00000566493 NFYCQ13952 458 aa10.27□□□□□ -0.77
UBR1-206ENST00000566493 CCNIQ14094 377 aa10.27□□□□□ -0.77
UBR1-206ENST00000566493 TRIP10Q15642 601 aa10.27□□□□□ -0.77
UBR1-206ENST00000566493 ZNF74Q16587 644 aa10.27□□□□□ -0.77
UBR1-206ENST00000566493 INTS11Q5TA45 600 aaKnown RBP10.27□□□□□ -0.77
UBR1-206ENST00000566493 TMEM53Q6P2H8 277 aa10.27□□□□□ -0.77
UBR1-206ENST00000566493 WDFY1Q8IWB7 410 aa10.27□□□□□ -0.77
UBR1-206ENST00000566493 SKA3Q8IX90 412 aa10.27□□□□□ -0.77
UBR1-206ENST00000566493 SLC22A24Q8N4F4 322 aa10.27□□□□□ -0.77
UBR1-206ENST00000566493 DPP10Q8N608 796 aa10.27□□□□□ -0.77
UBR1-206ENST00000566493 ADAMTS16Q8TE57 1224 aa10.27□□□□□ -0.77
UBR1-206ENST00000566493 RASSF5Q8WWW0 418 aa10.27□□□□□ -0.77
UBR1-206ENST00000566493 RDH5Q92781 318 aa10.27□□□□□ -0.77
UBR1-206ENST00000566493 SLC25A44Q96H78 314 aaPredicted RBP10.27□□□□□ -0.77
UBR1-206ENST00000566493 MPP4Q96JB8 637 aa10.27□□□□□ -0.77
UBR1-206ENST00000566493 ZNF75AQ96N20 296 aa10.27□□□□□ -0.77
UBR1-206ENST00000566493 CGREF1Q99674 301 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms