RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 NRIP3Q9NQ35 241 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 SLC39A9Q9NUM3 307 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 TP53TG5Q9Y2B4 290 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 SLC27A6Q9Y2P4 619 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 TIMM10BQ9Y5J6 103 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 TTRP02766 147 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 CD1AP06126 327 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 FABP4P15090 132 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 PITPNBP48739 271 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 SKP2Q13309 424 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 FAM110CQ1W6H9 321 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 NXPE4Q6UWF7 544 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 CAMKMTQ7Z624 323 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 ANKRD46Q86W74 232 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 GPSM1Q86YR5 675 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 ZNF354BQ96LW1 612 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 ACTRT3Q9BYD9 372 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 TKTL2Q9H0I9 626 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 SMG9Q9H0W8 520 aaKnown RBP2.69□□□□□ -1.98
CHD9-218ENST00000566029 ACSS1Q9NUB1 689 aaPredicted RBP2.69□□□□□ -1.98
CHD9-218ENST00000566029 FAM206AQ9NX38 181 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 PCDHB10Q9UN67 800 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 A6NIZ1 184 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 HSPB2A8KAH6 182 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 K7ERU9 68 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 AP4M1O00189 453 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 PHOX2AO14813 284 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 AGPAT2O15120 278 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 GASTP01350 101 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 EBLN1P0CF75 366 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 TNFRSF1BP20333 461 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 GALP22466 123 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 SHC1P29353 583 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 ARRB1P49407 418 aaPredicted RBP2.69□□□□□ -1.98
CHD9-218ENST00000566029 TAF6P49848 677 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 CDK6Q00534 326 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 HSPB2Q16082 182 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 XKR4Q5GH76 650 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 OR52W1Q6IF63 320 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 MBOAT1Q6ZNC8 495 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 SLC36A1Q7Z2H8 476 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 NDRG1Q92597 394 aaKnown RBP2.69□□□□□ -1.98
CHD9-218ENST00000566029 FAM122AQ96E09 287 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 TIMP4Q99727 224 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 SULT4A1Q9BR01 284 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 LMF2Q9BU23 707 aaKnown RBP2.69□□□□□ -1.98
CHD9-218ENST00000566029 TBC1D17Q9HA65 648 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 SMCO4Q9NRQ5 59 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 GNG13Q9P2W3 67 aa2.69□□□□□ -1.98
CHD9-218ENST00000566029 SIPA1L3O60292 1781 aaPredicted RBP2.68□□□□□ -1.98
CHD9-218ENST00000566029 SERTM2A0A1B0GWG4 89 aa2.68□□□□□ -1.98
CHD9-218ENST00000566029 ERAL1O75616 437 aaKnown RBP2.68□□□□□ -1.98
CHD9-218ENST00000566029 ITGB2P05107 769 aa2.68□□□□□ -1.98
CHD9-218ENST00000566029 HIST1H1BP16401 226 aaKnown RBP2.68□□□□□ -1.98
CHD9-218ENST00000566029 ZNF41P51814 821 aaPredicted RBP2.68□□□□□ -1.98
CHD9-218ENST00000566029 FBXW4P57775 412 aa2.68□□□□□ -1.98
CHD9-218ENST00000566029 ACTBP60709 375 aa2.68□□□□□ -1.98
CHD9-218ENST00000566029 ACTG1P63261 375 aa2.68□□□□□ -1.98
CHD9-218ENST00000566029 ENTPD8Q5MY95 495 aa2.68□□□□□ -1.98
CHD9-218ENST00000566029 CD300LDQ6UXZ3 194 aa2.68□□□□□ -1.98
CHD9-218ENST00000566029 LRRC69Q6ZNQ3 347 aa2.68□□□□□ -1.98
CHD9-218ENST00000566029 BHLHE23Q8NDY6 225 aa2.68□□□□□ -1.98
CHD9-218ENST00000566029 OR5M1Q8NGP8 315 aa2.68□□□□□ -1.98
CHD9-218ENST00000566029 FBXO32Q969P5 355 aa2.68□□□□□ -1.98
CHD9-218ENST00000566029 DHCR7Q9UBM7 475 aaKnown RBP2.68□□□□□ -1.98
CHD9-218ENST00000566029 DKKL1Q9UK85 242 aa2.68□□□□□ -1.98
CHD9-218ENST00000566029 HHLA1C9JL84 531 aa2.68□□□□□ -1.98
CHD9-218ENST00000566029 TAPBPO15533 448 aa2.68□□□□□ -1.98
CHD9-218ENST00000566029 TBX18O95935 607 aa2.68□□□□□ -1.98
CHD9-218ENST00000566029 FGF1P05230 155 aa2.68□□□□□ -1.98
CHD9-218ENST00000566029 RAB5AP20339 215 aa2.68□□□□□ -1.98
CHD9-218ENST00000566029 F2RP25116 425 aa2.68□□□□□ -1.98
CHD9-218ENST00000566029 SERPINA4P29622 427 aa2.68□□□□□ -1.98
CHD9-218ENST00000566029 RPS10P46783 165 aaKnown RBP2.68□□□□□ -1.98
CHD9-218ENST00000566029 GIPRP48546 466 aa2.68□□□□□ -1.98
CHD9-218ENST00000566029 GTF2H2Q13888 395 aa2.68□□□□□ -1.98
CHD9-218ENST00000566029 RGNQ15493 299 aa2.68□□□□□ -1.98
CHD9-218ENST00000566029 ZNF239Q16600 458 aaKnown RBP2.68□□□□□ -1.98
CHD9-218ENST00000566029 PRSS53Q2L4Q9 553 aa2.68□□□□□ -1.98
CHD9-218ENST00000566029 SLC35E4Q6ICL7 350 aa2.68□□□□□ -1.98
CHD9-218ENST00000566029 H3F3CQ6NXT2 135 aa2.68□□□□□ -1.98
CHD9-218ENST00000566029 JMJD6Q6NYC1 403 aaPredicted RBP2.68□□□□□ -1.98
CHD9-218ENST00000566029 GTF2H2CQ6P1K8 395 aa2.68□□□□□ -1.98
CHD9-218ENST00000566029 PAQR4Q8N4S7 273 aaPredicted RBP2.68□□□□□ -1.98
CHD9-218ENST00000566029 TCEANCQ8N8B7 351 aa2.68□□□□□ -1.98
CHD9-218ENST00000566029 SLC30A7Q8NEW0 376 aa2.68□□□□□ -1.98
CHD9-218ENST00000566029 OR10R2Q8NGX6 335 aa2.68□□□□□ -1.98
CHD9-218ENST00000566029 EXTL1Q92935 676 aa2.68□□□□□ -1.98
CHD9-218ENST00000566029 TMEM39BQ9GZU3 492 aa2.68□□□□□ -1.98
CHD9-218ENST00000566029 ELL3Q9HB65 397 aaPredicted RBP2.68□□□□□ -1.98
CHD9-218ENST00000566029 UQCC1Q9NVA1 299 aa2.68□□□□□ -1.98
CHD9-218ENST00000566029 YBX2Q9Y2T7 364 aaKnown RBP2.68□□□□□ -1.98
CHD9-218ENST00000566029 KCNIP3Q9Y2W7 256 aa2.68□□□□□ -1.98
CHD9-218ENST00000566029 ELOA3CA0A087WX78 387 aaPredicted RBP2.68□□□□□ -1.98
CHD9-218ENST00000566029 C2orf92A0A1B0GVN3 265 aa2.68□□□□□ -1.98
CHD9-218ENST00000566029 C1orf226A1L170 272 aa2.68□□□□□ -1.98
CHD9-218ENST00000566029 BLOC1S5-TXNDC5H3BN57 136 aa2.68□□□□□ -1.98
CHD9-218ENST00000566029 LEFTY2O00292 366 aa2.68□□□□□ -1.98
CHD9-218ENST00000566029 TLX3O43711 291 aaPredicted RBP2.68□□□□□ -1.98
CHD9-218ENST00000566029 ABLIM3O94929 683 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms