RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 HRASLS5Q96KN8 279 aa4.73□□□□□ -1.65
SMG1-211ENST00000565324 PEBP4Q96S96 227 aa4.73□□□□□ -1.65
SMG1-211ENST00000565324 DNMT3BQ9UBC3 853 aaKnown RBP4.73□□□□□ -1.65
SMG1-211ENST00000565324 CSAG2Q9Y5P2 127 aa4.73□□□□□ -1.65
SMG1-211ENST00000565324 HEATR1Q9H583 2144 aaKnown RBP4.73□□□□□ -1.65
SMG1-211ENST00000565324 HSBP1O75506 76 aa4.73□□□□□ -1.65
SMG1-211ENST00000565324 KLF8O95600 359 aaPredicted RBP4.73□□□□□ -1.65
SMG1-211ENST00000565324 GM2AP17900 193 aa4.73□□□□□ -1.65
SMG1-211ENST00000565324 TNFRSF1BP20333 461 aa4.73□□□□□ -1.65
SMG1-211ENST00000565324 OR7A5Q15622 319 aa4.73□□□□□ -1.65
SMG1-211ENST00000565324 CDC20BQ86Y33 519 aa4.73□□□□□ -1.65
SMG1-211ENST00000565324 MMP21Q8N119 569 aa4.73□□□□□ -1.65
SMG1-211ENST00000565324 FOXJ1Q92949 421 aa4.73□□□□□ -1.65
SMG1-211ENST00000565324 PEX11GQ96HA9 241 aa4.73□□□□□ -1.65
SMG1-211ENST00000565324 SLC35E1Q96K37 410 aa4.73□□□□□ -1.65
SMG1-211ENST00000565324 GLIS2Q9BZE0 524 aaPredicted RBP4.73□□□□□ -1.65
SMG1-211ENST00000565324 UBQLN3Q9H347 655 aa4.73□□□□□ -1.65
SMG1-211ENST00000565324 DCAF16Q9NXF7 216 aa4.73□□□□□ -1.65
SMG1-211ENST00000565324 KIAA0100Q14667 2235 aaKnown RBP4.73□□□□□ -1.65
SMG1-211ENST00000565324 TRABD2BA6NFA1 517 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 G3V2L1 256 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 SYT5O00445 386 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 WNT7AO00755 349 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 GCAP28676 217 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 SIM1P81133 766 aaPredicted RBP4.72□□□□□ -1.65
SMG1-211ENST00000565324 MS4A2Q01362 244 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 SEMG2Q02383 582 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 ANKRD16Q6P6B7 361 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 CBLL1Q75N03 491 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 ZNF534Q76KX8 674 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 NAXDQ8IW45 347 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 CPEB3Q8NE35 698 aaKnown RBP4.72□□□□□ -1.65
SMG1-211ENST00000565324 C2CD4CQ8TF44 421 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 GHSRQ92847 366 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 C20orf24Q9BUV8 137 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 K7ERQ8 282 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 GPR171O14626 319 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 DDNO94850 711 aaPredicted RBP4.72□□□□□ -1.65
SMG1-211ENST00000565324 NTF3P20783 257 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 SHC2P98077 582 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 IL22RA1Q8N6P7 574 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 AKR1E2Q96JD6 320 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 BARHL1Q9BZE3 327 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 ELOVL3Q9HB03 270 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 ATXN7L1Q9ULK2 861 aaPredicted RBP4.72□□□□□ -1.65
SMG1-211ENST00000565324 A0A0J9YY10 115 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 A8MU76 341 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 TPOP07202 933 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 GSTP1P09211 210 aaKnown RBP4.72□□□□□ -1.65
SMG1-211ENST00000565324 PSMB10P40306 273 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 WNT7BP56706 349 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 GPR17Q13304 367 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 SLC36A2Q495M3 483 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 SMIM12Q96EX1 92 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 JAM3Q9BX67 310 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 C11orf54Q9H0W9 315 aaPredicted RBP4.72□□□□□ -1.65
SMG1-211ENST00000565324 PARD6AQ9NPB6 346 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 ATP13A2Q9NQ11 1180 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 IGSF5Q9NSI5 407 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 GPR55Q9Y2T6 319 aaPredicted RBP4.72□□□□□ -1.65
SMG1-211ENST00000565324 GPR45Q9Y5Y3 372 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 SCN10AQ9Y5Y9 1956 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 A0A1B0GUH1 482 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 A6NCN8 305 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 C17orf105B2RV13 164 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 MTHFD2P13995 350 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 NKX2-1P43699 371 aaPredicted RBP4.72□□□□□ -1.65
SMG1-211ENST00000565324 XCR1P46094 333 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 MAP2K6P52564 334 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 SPCS3P61009 180 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 GPM6BQ13491 265 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 MBTPS1Q14703 1052 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 NKX2-4Q9H2Z4 354 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 FZD1Q9UP38 647 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 SPTBP11277 2137 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 NKX6-3A6NJ46 265 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 GALR3O60755 368 aaPredicted RBP4.72□□□□□ -1.65
SMG1-211ENST00000565324 TXNDC12O95881 172 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 CYC1P08574 325 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 OR13C7P0DN81 318 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 POU3F2P20265 443 aaPredicted RBP4.72□□□□□ -1.65
SMG1-211ENST00000565324 SDHBP21912 280 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 HTR5AP47898 357 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 FCN2Q15485 313 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 MRPL38Q96DV4 380 aaKnown RBP4.72□□□□□ -1.65
SMG1-211ENST00000565324 WDR61Q9GZS3 305 aaKnown RBP4.72□□□□□ -1.65
SMG1-211ENST00000565324 GALNT9Q9HCQ5 603 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 SCN1AP35498 2009 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 TBX18O95935 607 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 BLVRBP30043 206 aaPredicted RBP4.72□□□□□ -1.65
SMG1-211ENST00000565324 ACVRL1P37023 503 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 LETMD1Q6P1Q0 360 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 PIGCQ92535 297 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 MUCL1Q96DR8 90 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 SHARPINQ9H0F6 387 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 GSX1Q9H4S2 264 aaPredicted RBP4.72□□□□□ -1.65
SMG1-211ENST00000565324 OBP2BQ9NPH6 170 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 AK3Q9UIJ7 227 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 PIKFYVEQ9Y2I7 2098 aa4.72□□□□□ -1.65
SMG1-211ENST00000565324 FAM183AA6NL82 134 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms