RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 PLBD1Q6P4A8 553 aa9.87□□□□□ -0.83
SF3B3-205ENST00000564899 LEG1Q6P5S2 330 aa9.87□□□□□ -0.83
SF3B3-205ENST00000564899 FCRLAQ7L513 359 aa9.87□□□□□ -0.83
SF3B3-205ENST00000564899 BCDIN3DQ7Z5W3 292 aaKnown RBP9.87□□□□□ -0.83
SF3B3-205ENST00000564899 ADCK1Q86TW2 530 aa9.87□□□□□ -0.83
SF3B3-205ENST00000564899 PM20D2Q8IYS1 436 aa9.87□□□□□ -0.83
SF3B3-205ENST00000564899 ARIH2OSQ8N7S6 290 aa9.87□□□□□ -0.83
SF3B3-205ENST00000564899 CYB561A3Q8NBI2 242 aa9.87□□□□□ -0.83
SF3B3-205ENST00000564899 BPIFB6Q8NFQ5 453 aa9.87□□□□□ -0.83
SF3B3-205ENST00000564899 OR9K2Q8NGE7 335 aa9.87□□□□□ -0.83
SF3B3-205ENST00000564899 ASB10Q8WXI3 467 aa9.87□□□□□ -0.83
SF3B3-205ENST00000564899 HDAC2Q92769 488 aaKnown RBP9.87□□□□□ -0.83
SF3B3-205ENST00000564899 TXNDC15Q96J42 360 aa9.87□□□□□ -0.83
SF3B3-205ENST00000564899 NMNAT3Q96T66 252 aa9.87□□□□□ -0.83
SF3B3-205ENST00000564899 TUBA1CQ9BQE3 449 aa9.87□□□□□ -0.83
SF3B3-205ENST00000564899 SF3B5Q9BWJ5 86 aaKnown RBP9.87□□□□□ -0.83
SF3B3-205ENST00000564899 PRRG4Q9BZD6 226 aa9.87□□□□□ -0.83
SF3B3-205ENST00000564899 HINT3Q9NQE9 182 aaKnown RBP9.87□□□□□ -0.83
SF3B3-205ENST00000564899 MED29Q9NX70 200 aa9.87□□□□□ -0.83
SF3B3-205ENST00000564899 SLC5A6Q9Y289 635 aa9.87□□□□□ -0.83
SF3B3-205ENST00000564899 MYRFQ9Y2G1 1151 aa9.87□□□□□ -0.83
SF3B3-205ENST00000564899 PKDREJQ9NTG1 2253 aa9.86□□□□□ -0.83
SF3B3-205ENST00000564899 MED13LQ71F56 2210 aa9.86□□□□□ -0.83
SF3B3-205ENST00000564899 SH3D21A4FU49 640 aa9.86□□□□□ -0.83
SF3B3-205ENST00000564899 ZNF716A6NP11 495 aa9.86□□□□□ -0.83
SF3B3-205ENST00000564899 CLCA1A8K7I4 914 aa9.86□□□□□ -0.83
SF3B3-205ENST00000564899 KDM4EB2RXH2 506 aaPredicted RBP9.86□□□□□ -0.83
SF3B3-205ENST00000564899 H7C1C5 153 aa9.86□□□□□ -0.83
SF3B3-205ENST00000564899 M0R3G1 203 aa9.86□□□□□ -0.83
SF3B3-205ENST00000564899 SLC1A7O00341 560 aa9.86□□□□□ -0.83
SF3B3-205ENST00000564899 ZNHIT1O43257 154 aa9.86□□□□□ -0.83
SF3B3-205ENST00000564899 PRODHO43272 600 aa9.86□□□□□ -0.83
SF3B3-205ENST00000564899 ARHGEF9O43307 516 aa9.86□□□□□ -0.83
SF3B3-205ENST00000564899 FAM20BO75063 409 aa9.86□□□□□ -0.83
SF3B3-205ENST00000564899 TNFAIP8O95379 198 aa9.86□□□□□ -0.83
SF3B3-205ENST00000564899 RENP00797 406 aa9.86□□□□□ -0.83
SF3B3-205ENST00000564899 CDKN2AP42771 156 aaKnown RBP9.86□□□□□ -0.83
SF3B3-205ENST00000564899 NUDT6P53370 316 aa9.86□□□□□ -0.83
SF3B3-205ENST00000564899 BIDP55957 195 aa9.86□□□□□ -0.83
SF3B3-205ENST00000564899 CXCR4P61073 352 aa9.86□□□□□ -0.83
SF3B3-205ENST00000564899 LCN6P62502 163 aa9.86□□□□□ -0.83
SF3B3-205ENST00000564899 SLC17A1Q14916 467 aa9.86□□□□□ -0.83
SF3B3-205ENST00000564899 SMN1Q16637 294 aaKnown RBP9.86□□□□□ -0.83
SF3B3-205ENST00000564899 RBM48Q5RL73 367 aaKnown RBP9.86□□□□□ -0.83
SF3B3-205ENST00000564899 ZNF362Q5T0B9 420 aaPredicted RBP9.86□□□□□ -0.83
SF3B3-205ENST00000564899 AADACL4Q5VUY2 407 aa9.86□□□□□ -0.83
SF3B3-205ENST00000564899 NXNL2Q5VZ03 156 aa9.86□□□□□ -0.83
SF3B3-205ENST00000564899 CREB3L2Q70SY1 520 aa9.86□□□□□ -0.83
SF3B3-205ENST00000564899 HDDC2Q7Z4H3 204 aa9.86□□□□□ -0.83
SF3B3-205ENST00000564899 CPOQ8IVL8 374 aa9.86□□□□□ -0.83
SF3B3-205ENST00000564899 GID4Q8IVV7 300 aa9.86□□□□□ -0.83
SF3B3-205ENST00000564899 NPEPL1Q8NDH3 523 aa9.86□□□□□ -0.83
SF3B3-205ENST00000564899 BBS1Q8NFJ9 593 aa9.86□□□□□ -0.83
SF3B3-205ENST00000564899 OR5M9Q8NGP3 310 aa9.86□□□□□ -0.83
SF3B3-205ENST00000564899 OR9Q1Q8NGQ5 310 aa9.86□□□□□ -0.83
SF3B3-205ENST00000564899 FNDC9Q8TBE3 224 aa9.86□□□□□ -0.83
SF3B3-205ENST00000564899 ZPLD1Q8TCW7 415 aa9.86□□□□□ -0.83
SF3B3-205ENST00000564899 RNF128Q8TEB7 428 aa9.86□□□□□ -0.83
SF3B3-205ENST00000564899 ABHD3Q8WU67 409 aa9.86□□□□□ -0.83
SF3B3-205ENST00000564899 FAR1Q8WVX9 515 aa9.86□□□□□ -0.83
SF3B3-205ENST00000564899 ZNF566Q969W8 418 aa9.86□□□□□ -0.83
SF3B3-205ENST00000564899 ZNF582Q96NG8 517 aaPredicted RBP9.86□□□□□ -0.83
SF3B3-205ENST00000564899 YTHDF1Q9BYJ9 559 aaKnown RBP9.86□□□□□ -0.83
SF3B3-205ENST00000564899 MED20Q9H944 212 aa9.86□□□□□ -0.83
SF3B3-205ENST00000564899 SCN3BQ9NY72 215 aa9.86□□□□□ -0.83
SF3B3-205ENST00000564899 H2AFY2Q9P0M6 372 aaPredicted RBP9.86□□□□□ -0.83
SF3B3-205ENST00000564899 BLOC1S6Q9UL45 172 aa9.86□□□□□ -0.83
SF3B3-205ENST00000564899 ZNF175Q9Y473 711 aa9.86□□□□□ -0.83
SF3B3-205ENST00000564899 ZNF469Q96JG9 3925 aaPredicted RBP9.85□□□□□ -0.83
SF3B3-205ENST00000564899 PRSS37A4D1T9 235 aa9.85□□□□□ -0.83
SF3B3-205ENST00000564899 OR6C68A6NDL8 312 aa9.85□□□□□ -0.83
SF3B3-205ENST00000564899 SLC22A20A6NK97 555 aa9.85□□□□□ -0.83
SF3B3-205ENST00000564899 SNTNA6NMZ2 147 aa9.85□□□□□ -0.83
SF3B3-205ENST00000564899 ZNF726A6NNF4 738 aa9.85□□□□□ -0.83
SF3B3-205ENST00000564899 AKAP8O43823 692 aaKnown RBP9.85□□□□□ -0.83
SF3B3-205ENST00000564899 XPNPEP2O43895 674 aa9.85□□□□□ -0.83
SF3B3-205ENST00000564899 AQP8O94778 261 aa9.85□□□□□ -0.83
SF3B3-205ENST00000564899 LYNP07948 512 aa9.85□□□□□ -0.83
SF3B3-205ENST00000564899 CCDC159P0C7I6 412 aa9.85□□□□□ -0.83
SF3B3-205ENST00000564899 FCGR2AP12318 317 aa9.85□□□□□ -0.83
SF3B3-205ENST00000564899 CRHBPP24387 322 aa9.85□□□□□ -0.83
SF3B3-205ENST00000564899 PTGS2P35354 604 aa9.85□□□□□ -0.83
SF3B3-205ENST00000564899 TDGF1P3P51864 188 aa9.85□□□□□ -0.83
SF3B3-205ENST00000564899 SLC16A1P53985 500 aa9.85□□□□□ -0.83
SF3B3-205ENST00000564899 CDH11P55287 796 aa9.85□□□□□ -0.83
SF3B3-205ENST00000564899 CLDN17P56750 224 aa9.85□□□□□ -0.83
SF3B3-205ENST00000564899 CSNK2BP67870 215 aa9.85□□□□□ -0.83
SF3B3-205ENST00000564899 RUNX1T1Q06455 604 aa9.85□□□□□ -0.83
SF3B3-205ENST00000564899 RASGEF1BQ0VAM2 473 aa9.85□□□□□ -0.83
SF3B3-205ENST00000564899 KCTD21Q4G0X4 260 aa9.85□□□□□ -0.83
SF3B3-205ENST00000564899 KLHL12Q53G59 568 aa9.85□□□□□ -0.83
SF3B3-205ENST00000564899 NIPAL3Q6P499 406 aa9.85□□□□□ -0.83
SF3B3-205ENST00000564899 PLXDC2Q6UX71 529 aa9.85□□□□□ -0.83
SF3B3-205ENST00000564899 NHLRC1Q6VVB1 395 aa9.85□□□□□ -0.83
SF3B3-205ENST00000564899 P4HA3Q7Z4N8 544 aa9.85□□□□□ -0.83
SF3B3-205ENST00000564899 FGD2Q7Z6J4 655 aa9.85□□□□□ -0.83
SF3B3-205ENST00000564899 OR6X1Q8NH79 312 aa9.85□□□□□ -0.83
SF3B3-205ENST00000564899 RFKQ969G6 155 aa9.85□□□□□ -0.83
SF3B3-205ENST00000564899 ADAD1Q96M93 576 aaKnown RBP9.85□□□□□ -0.83
SF3B3-205ENST00000564899 ZNF385AQ96PM9 386 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms