RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 SNX33Q8WV41 574 aa17.53■□□□□ 0.4
CLN6-205ENST00000564846 COQ7Q99807 217 aa17.53■□□□□ 0.4
CLN6-205ENST00000564846 RNF167Q9H6Y7 350 aa17.53■□□□□ 0.4
CLN6-205ENST00000564846 ZMIZ1Q9ULJ6 1067 aa17.53■□□□□ 0.4
CLN6-205ENST00000564846 LOC102725191A0A1B0GVB3 256 aa17.52■□□□□ 0.4
CLN6-205ENST00000564846 EIF1BO60739 113 aaKnown RBP17.52■□□□□ 0.4
CLN6-205ENST00000564846 RFPL3SP0C7P2 107 aa17.52■□□□□ 0.4
CLN6-205ENST00000564846 CD53P19397 219 aa17.52■□□□□ 0.4
CLN6-205ENST00000564846 OR12D2P58182 307 aa17.52■□□□□ 0.4
CLN6-205ENST00000564846 RPS25P62851 125 aaKnown RBP17.52■□□□□ 0.4
CLN6-205ENST00000564846 CSNK2A1P68400 391 aaPredicted RBP17.52■□□□□ 0.4
CLN6-205ENST00000564846 RUNX1T1Q06455 604 aa17.52■□□□□ 0.4
CLN6-205ENST00000564846 TMEM225Q6GV28 225 aa17.52■□□□□ 0.4
CLN6-205ENST00000564846 DNM1P34Q6PK57 102 aa17.52■□□□□ 0.4
CLN6-205ENST00000564846 CD200R1LQ6Q8B3 271 aa17.52■□□□□ 0.4
CLN6-205ENST00000564846 NHLRC1Q6VVB1 395 aa17.52■□□□□ 0.4
CLN6-205ENST00000564846 LINC00299Q6ZSB3 139 aa17.52■□□□□ 0.4
CLN6-205ENST00000564846 YRDCQ86U90 279 aaKnown RBP17.52■□□□□ 0.4
CLN6-205ENST00000564846 EGFL6Q8IUX8 553 aa17.52■□□□□ 0.4
CLN6-205ENST00000564846 TMEM203Q969S6 136 aa17.52■□□□□ 0.4
CLN6-205ENST00000564846 OXGR1Q96P68 337 aa17.52■□□□□ 0.4
CLN6-205ENST00000564846 OR2B2Q9GZK3 357 aa17.52■□□□□ 0.4
CLN6-205ENST00000564846 RERGLQ9H628 205 aa17.52■□□□□ 0.4
CLN6-205ENST00000564846 MARCH7Q9H992 704 aa17.52■□□□□ 0.4
CLN6-205ENST00000564846 PINLYPA6NC86 204 aa17.51■□□□□ 0.39
CLN6-205ENST00000564846 SLC16A7O60669 478 aa17.51■□□□□ 0.39
CLN6-205ENST00000564846 SLC34A2O95436 690 aa17.51■□□□□ 0.39
CLN6-205ENST00000564846 HDDC2Q7Z4H3 204 aa17.51■□□□□ 0.39
CLN6-205ENST00000564846 RFLNBQ8N5W9 214 aa17.51■□□□□ 0.39
CLN6-205ENST00000564846 FAM83FQ8NEG4 500 aaPredicted RBP17.51■□□□□ 0.39
CLN6-205ENST00000564846 KLHL15Q96M94 604 aa17.51■□□□□ 0.39
CLN6-205ENST00000564846 INTS14Q96SY0 518 aa17.51■□□□□ 0.39
CLN6-205ENST00000564846 KCNK17Q96T54 332 aa17.51■□□□□ 0.39
CLN6-205ENST00000564846 SLIRPQ9GZT3 109 aaKnown RBP17.51■□□□□ 0.39
CLN6-205ENST00000564846 SIAEQ9HAT2 523 aa17.51■□□□□ 0.39
CLN6-205ENST00000564846 TXNL4BQ9NX01 149 aaKnown RBP17.51■□□□□ 0.39
CLN6-205ENST00000564846 PLA2G3Q9NZ20 509 aa17.51■□□□□ 0.39
CLN6-205ENST00000564846 B4GALT7Q9UBV7 327 aa17.51■□□□□ 0.39
CLN6-205ENST00000564846 CDV3Q9UKY7 258 aaKnown RBP17.51■□□□□ 0.39
CLN6-205ENST00000564846 COPS3Q9UNS2 423 aa17.51■□□□□ 0.39
CLN6-205ENST00000564846 IGLV1-36A0A0B4J1U3 117 aa17.51■□□□□ 0.39
CLN6-205ENST00000564846 TRDV1A0A1B0GX56 115 aa17.51■□□□□ 0.39
CLN6-205ENST00000564846 OR5H15A6NDH6 313 aa17.51■□□□□ 0.39
CLN6-205ENST00000564846 NKX2-8O15522 239 aa17.51■□□□□ 0.39
CLN6-205ENST00000564846 HLA-DPB1P04440 258 aa17.51■□□□□ 0.39
CLN6-205ENST00000564846 GALP22466 123 aa17.51■□□□□ 0.39
CLN6-205ENST00000564846 GDF1P27539 372 aa17.51■□□□□ 0.39
CLN6-205ENST00000564846 H3F3AP84243 136 aa17.51■□□□□ 0.39
CLN6-205ENST00000564846 TRMT61AQ96FX7 289 aaKnown RBP17.51■□□□□ 0.39
CLN6-205ENST00000564846 TXNDC15Q96J42 360 aa17.51■□□□□ 0.39
CLN6-205ENST00000564846 DACH2Q96NX9 599 aa17.51■□□□□ 0.39
CLN6-205ENST00000564846 TM9SF2Q99805 663 aa17.51■□□□□ 0.39
CLN6-205ENST00000564846 NAA11Q9BSU3 229 aaPredicted RBP17.51■□□□□ 0.39
CLN6-205ENST00000564846 WDR76Q9H967 626 aa17.51■□□□□ 0.39
CLN6-205ENST00000564846 MED29Q9NX70 200 aa17.51■□□□□ 0.39
CLN6-205ENST00000564846 CCDC59Q9P031 241 aaKnown RBP17.51■□□□□ 0.39
CLN6-205ENST00000564846 RASD1Q9Y272 281 aa17.51■□□□□ 0.39
CLN6-205ENST00000564846 TMEM14AQ9Y6G1 99 aa17.51■□□□□ 0.39
CLN6-205ENST00000564846 TVP23AA6NH52 213 aa17.5■□□□□ 0.39
CLN6-205ENST00000564846 CENPBD1B2RD01 187 aa17.5■□□□□ 0.39
CLN6-205ENST00000564846 DNPH1O43598 174 aa17.5■□□□□ 0.39
CLN6-205ENST00000564846 PLPP2O43688 288 aa17.5■□□□□ 0.39
CLN6-205ENST00000564846 TRAPPC6AO75865 159 aa17.5■□□□□ 0.39
CLN6-205ENST00000564846 PRKAR1AP10644 381 aa17.5■□□□□ 0.39
CLN6-205ENST00000564846 CTLA4P16410 223 aa17.5■□□□□ 0.39
CLN6-205ENST00000564846 FGF9P31371 208 aaPredicted RBP17.5■□□□□ 0.39
CLN6-205ENST00000564846 BIDP55957 195 aa17.5■□□□□ 0.39
CLN6-205ENST00000564846 MFAP5Q13361 173 aa17.5■□□□□ 0.39
CLN6-205ENST00000564846 DYNC1I2Q13409 638 aaKnown RBP17.5■□□□□ 0.39
CLN6-205ENST00000564846 CRTC2Q53ET0 693 aaPredicted RBP17.5■□□□□ 0.39
CLN6-205ENST00000564846 GPAT4Q86UL3 456 aa17.5■□□□□ 0.39
CLN6-205ENST00000564846 CDC20BQ86Y33 519 aa17.5■□□□□ 0.39
CLN6-205ENST00000564846 SULF2Q8IWU5 870 aa17.5■□□□□ 0.39
CLN6-205ENST00000564846 SFXN2Q96NB2 322 aa17.5■□□□□ 0.39
CLN6-205ENST00000564846 RNF32Q9H0A6 362 aa17.5■□□□□ 0.39
CLN6-205ENST00000564846 TSPAN10Q9H1Z9 355 aaPredicted RBP17.5■□□□□ 0.39
CLN6-205ENST00000564846 GSTK1Q9Y2Q3 226 aa17.5■□□□□ 0.39
CLN6-205ENST00000564846 A6NL46 340 aa17.49■□□□□ 0.39
CLN6-205ENST00000564846 LINC01387J3KSC0 135 aa17.49■□□□□ 0.39
CLN6-205ENST00000564846 VAMP5O95183 116 aa17.49■□□□□ 0.39
CLN6-205ENST00000564846 ZNF43P17038 809 aa17.49■□□□□ 0.39
CLN6-205ENST00000564846 GBX2P52951 348 aaPredicted RBP17.49■□□□□ 0.39
CLN6-205ENST00000564846 GLO1Q04760 184 aa17.49■□□□□ 0.39
CLN6-205ENST00000564846 TRAM1Q15629 374 aa17.49■□□□□ 0.39
CLN6-205ENST00000564846 MOGQ16653 247 aa17.49■□□□□ 0.39
CLN6-205ENST00000564846 TP53I3Q53FA7 332 aa17.49■□□□□ 0.39
CLN6-205ENST00000564846 VASNQ6EMK4 673 aa17.49■□□□□ 0.39
CLN6-205ENST00000564846 SLC25A25Q6KCM7 469 aa17.49■□□□□ 0.39
CLN6-205ENST00000564846 KCTD20Q7Z5Y7 419 aa17.49■□□□□ 0.39
CLN6-205ENST00000564846 MDS2Q8NDY4 140 aa17.49■□□□□ 0.39
CLN6-205ENST00000564846 OR6N2Q8NGY6 317 aa17.49■□□□□ 0.39
CLN6-205ENST00000564846 KLF13Q9Y2Y9 288 aaPredicted RBP17.49■□□□□ 0.39
CLN6-205ENST00000564846 SIRT4Q9Y6E7 314 aaPredicted RBP17.49■□□□□ 0.39
CLN6-205ENST00000564846 A3GALT2U3KPV4 340 aa17.49■□□□□ 0.39
CLN6-205ENST00000564846 CNOT1A5YKK6 2376 aaKnown RBP17.49■□□□□ 0.39
CLN6-205ENST00000564846 GVINP1Q7Z2Y8 2422 aa17.49■□□□□ 0.39
CLN6-205ENST00000564846 ZNF814B7Z6K7 855 aa17.48■□□□□ 0.39
CLN6-205ENST00000564846 E9PI62 339 aa17.48■□□□□ 0.39
CLN6-205ENST00000564846 PHYHO14832 338 aa17.48■□□□□ 0.39
CLN6-205ENST00000564846 TRAF3IP2O43734 574 aaPredicted RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms