RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 FBXO42Q6P3S6 717 aa18.66■□□□□ 0.58
MAP1LC3B-206ENST00000564844 C12orf45Q8N5I9 185 aaPredicted RBP18.66■□□□□ 0.58
MAP1LC3B-206ENST00000564844 MFSD9Q8NBP5 474 aa18.66■□□□□ 0.58
MAP1LC3B-206ENST00000564844 OR52R1Q8NGF1 315 aa18.66■□□□□ 0.58
MAP1LC3B-206ENST00000564844 PAQR8Q8TEZ7 354 aa18.66■□□□□ 0.58
MAP1LC3B-206ENST00000564844 NSMAFQ92636 917 aa18.66■□□□□ 0.58
MAP1LC3B-206ENST00000564844 WDR76Q9H967 626 aa18.66■□□□□ 0.58
MAP1LC3B-206ENST00000564844 STEAP1Q9UHE8 339 aa18.66■□□□□ 0.58
MAP1LC3B-206ENST00000564844 TICRRQ7Z2Z1 1910 aa18.66■□□□□ 0.58
MAP1LC3B-206ENST00000564844 TMEM200CA6NKL6 621 aa18.65■□□□□ 0.58
MAP1LC3B-206ENST00000564844 KCNJ3P48549 501 aa18.65■□□□□ 0.58
MAP1LC3B-206ENST00000564844 STEAP1BQ6NZ63 245 aa18.65■□□□□ 0.58
MAP1LC3B-206ENST00000564844 KCTD9Q7L273 389 aa18.65■□□□□ 0.58
MAP1LC3B-206ENST00000564844 FAM220AQ7Z4H9 259 aa18.65■□□□□ 0.58
MAP1LC3B-206ENST00000564844 FRMD1Q8N878 549 aa18.65■□□□□ 0.58
MAP1LC3B-206ENST00000564844 OR6K3Q8NGY3 331 aa18.65■□□□□ 0.58
MAP1LC3B-206ENST00000564844 FITM1A5D6W6 292 aa18.65■□□□□ 0.58
MAP1LC3B-206ENST00000564844 GGT3PA6NGU5 568 aa18.65■□□□□ 0.58
MAP1LC3B-206ENST00000564844 EEF1E1-BLOC1S5C9J1V9 151 aa18.65■□□□□ 0.58
MAP1LC3B-206ENST00000564844 FADS1O60427 444 aa18.65■□□□□ 0.58
MAP1LC3B-206ENST00000564844 ITGA5P08648 1049 aa18.65■□□□□ 0.58
MAP1LC3B-206ENST00000564844 BDKRB2P30411 391 aa18.65■□□□□ 0.58
MAP1LC3B-206ENST00000564844 ATP1B3P54709 279 aa18.65■□□□□ 0.58
MAP1LC3B-206ENST00000564844 LY6G6FQ5SQ64 297 aa18.65■□□□□ 0.58
MAP1LC3B-206ENST00000564844 NKAIN2Q5VXU1 208 aa18.65■□□□□ 0.58
MAP1LC3B-206ENST00000564844 ZCCHC12Q6PEW1 402 aa18.65■□□□□ 0.58
MAP1LC3B-206ENST00000564844 ADAMTSL4Q6UY14 1074 aa18.65■□□□□ 0.58
MAP1LC3B-206ENST00000564844 LRRTM1Q86UE6 522 aa18.65■□□□□ 0.58
MAP1LC3B-206ENST00000564844 SLC35F3Q8IY50 421 aa18.65■□□□□ 0.58
MAP1LC3B-206ENST00000564844 MED9Q9NWA0 146 aa18.65■□□□□ 0.58
MAP1LC3B-206ENST00000564844 ICAM5Q9UMF0 924 aa18.65■□□□□ 0.58
MAP1LC3B-206ENST00000564844 DAPP1Q9UN19 280 aa18.65■□□□□ 0.58
MAP1LC3B-206ENST00000564844 B3GALT2O43825 422 aa18.65■□□□□ 0.58
MAP1LC3B-206ENST00000564844 CTAG2O75638 210 aa18.65■□□□□ 0.58
MAP1LC3B-206ENST00000564844 IGKV1D-16P01601 117 aa18.65■□□□□ 0.58
MAP1LC3B-206ENST00000564844 CNR1P21554 472 aa18.65■□□□□ 0.58
MAP1LC3B-206ENST00000564844 ACAA2P42765 397 aaKnown RBP18.65■□□□□ 0.58
MAP1LC3B-206ENST00000564844 CAPZA1P52907 286 aa18.65■□□□□ 0.58
MAP1LC3B-206ENST00000564844 ERV3-1Q14264 604 aa18.65■□□□□ 0.58
MAP1LC3B-206ENST00000564844 TMEM71Q6P5X7 295 aa18.65■□□□□ 0.58
MAP1LC3B-206ENST00000564844 KRT77Q7Z794 578 aa18.65■□□□□ 0.58
MAP1LC3B-206ENST00000564844 LDLRAD3Q86YD5 345 aa18.65■□□□□ 0.58
MAP1LC3B-206ENST00000564844 POMGNT2Q8NAT1 580 aa18.65■□□□□ 0.58
MAP1LC3B-206ENST00000564844 SLC2A12Q8TD20 617 aa18.65■□□□□ 0.58
MAP1LC3B-206ENST00000564844 VWCEQ96DN2 955 aa18.65■□□□□ 0.58
MAP1LC3B-206ENST00000564844 C19orf53Q9UNZ5 99 aaPredicted RBP18.65■□□□□ 0.58
MAP1LC3B-206ENST00000564844 SLC22A13Q9Y226 551 aa18.65■□□□□ 0.58
MAP1LC3B-206ENST00000564844 SIGLEC6O43699 453 aa18.64■□□□□ 0.57
MAP1LC3B-206ENST00000564844 AGR2O95994 175 aa18.64■□□□□ 0.57
MAP1LC3B-206ENST00000564844 AVPR2P30518 371 aa18.64■□□□□ 0.57
MAP1LC3B-206ENST00000564844 PRSS3P35030 304 aa18.64■□□□□ 0.57
MAP1LC3B-206ENST00000564844 CTNNB1P35222 781 aa18.64■□□□□ 0.57
MAP1LC3B-206ENST00000564844 NR0B2Q15466 257 aa18.64■□□□□ 0.57
MAP1LC3B-206ENST00000564844 LINC00469Q8N7U9 141 aa18.64■□□□□ 0.57
MAP1LC3B-206ENST00000564844 TMIEQ8NEW7 156 aa18.64■□□□□ 0.57
MAP1LC3B-206ENST00000564844 RNF166Q96A37 237 aaPredicted RBP18.64■□□□□ 0.57
MAP1LC3B-206ENST00000564844 MYADMQ96S97 322 aa18.64■□□□□ 0.57
MAP1LC3B-206ENST00000564844 AMELYQ99218 206 aa18.64■□□□□ 0.57
MAP1LC3B-206ENST00000564844 CGGBP1Q9UFW8 167 aaPredicted RBP18.64■□□□□ 0.57
MAP1LC3B-206ENST00000564844 DTX4Q9Y2E6 619 aa18.64■□□□□ 0.57
MAP1LC3B-206ENST00000564844 OR6C76A6NM76 312 aa18.64■□□□□ 0.57
MAP1LC3B-206ENST00000564844 AKR7A3O95154 331 aa18.64■□□□□ 0.57
MAP1LC3B-206ENST00000564844 HLA-DQA2P01906 255 aa18.64■□□□□ 0.57
MAP1LC3B-206ENST00000564844 AKAIN1P0CW23 69 aa18.64■□□□□ 0.57
MAP1LC3B-206ENST00000564844 PVALBP20472 110 aaPredicted RBP18.64■□□□□ 0.57
MAP1LC3B-206ENST00000564844 DRD3P35462 400 aa18.64■□□□□ 0.57
MAP1LC3B-206ENST00000564844 ALKBH1Q13686 389 aaKnown RBP18.64■□□□□ 0.57
MAP1LC3B-206ENST00000564844 C2orf76Q3KRA6 126 aa18.64■□□□□ 0.57
MAP1LC3B-206ENST00000564844 CNKSR3Q6P9H4 555 aa18.64■□□□□ 0.57
MAP1LC3B-206ENST00000564844 SFTPA2Q8IWL1 248 aa18.64■□□□□ 0.57
MAP1LC3B-206ENST00000564844 PITHD1Q9GZP4 211 aaPredicted RBP18.64■□□□□ 0.57
MAP1LC3B-206ENST00000564844 DNTTIP1Q9H147 329 aa18.64■□□□□ 0.57
MAP1LC3B-206ENST00000564844 TBC1D29Q9UFV1 150 aa18.64■□□□□ 0.57
MAP1LC3B-206ENST00000564844 ENTPD2Q9Y5L3 495 aa18.64■□□□□ 0.57
MAP1LC3B-206ENST00000564844 TMEM82A0PJX8 343 aa18.63■□□□□ 0.57
MAP1LC3B-206ENST00000564844 DCDC2BA2VCK2 349 aa18.63■□□□□ 0.57
MAP1LC3B-206ENST00000564844 GPRIN2O60269 458 aa18.63■□□□□ 0.57
MAP1LC3B-206ENST00000564844 WDPCPO95876 746 aa18.63■□□□□ 0.57
MAP1LC3B-206ENST00000564844 MNDAP41218 407 aa18.63■□□□□ 0.57
MAP1LC3B-206ENST00000564844 FGL1Q08830 312 aa18.63■□□□□ 0.57
MAP1LC3B-206ENST00000564844 ZNF227Q86WZ6 799 aa18.63■□□□□ 0.57
MAP1LC3B-206ENST00000564844 MKKSQ9NPJ1 570 aaPredicted RBP18.63■□□□□ 0.57
MAP1LC3B-206ENST00000564844 RASL12Q9NYN1 266 aa18.63■□□□□ 0.57
MAP1LC3B-206ENST00000564844 PURGQ9UJV8 347 aaKnown RBP18.63■□□□□ 0.57
MAP1LC3B-206ENST00000564844 XRCC3O43542 346 aa18.63■□□□□ 0.57
MAP1LC3B-206ENST00000564844 BRINP1O60477 761 aa18.63■□□□□ 0.57
MAP1LC3B-206ENST00000564844 RAB3DO95716 219 aa18.63■□□□□ 0.57
MAP1LC3B-206ENST00000564844 NFYBP25208 207 aa18.63■□□□□ 0.57
MAP1LC3B-206ENST00000564844 DLSTP36957 453 aa18.63■□□□□ 0.57
MAP1LC3B-206ENST00000564844 FLI1Q01543 452 aaPredicted RBP18.63■□□□□ 0.57
MAP1LC3B-206ENST00000564844 TMEM52BQ4KMG9 183 aa18.63■□□□□ 0.57
MAP1LC3B-206ENST00000564844 SCPEP1Q9HB40 452 aa18.63■□□□□ 0.57
MAP1LC3B-206ENST00000564844 LRIT1Q9P2V4 623 aa18.63■□□□□ 0.57
MAP1LC3B-206ENST00000564844 LAMP5Q9UJQ1 280 aa18.63■□□□□ 0.57
MAP1LC3B-206ENST00000564844 WDFY3Q8IZQ1 3526 aa18.63■□□□□ 0.57
MAP1LC3B-206ENST00000564844 C13orf42A0A1B0GVH6 325 aa18.63■□□□□ 0.57
MAP1LC3B-206ENST00000564844 RFPL4AA6NLU0 287 aa18.63■□□□□ 0.57
MAP1LC3B-206ENST00000564844 RFPL4AL1F8VTS6 287 aa18.63■□□□□ 0.57
MAP1LC3B-206ENST00000564844 ZNF749O43361 778 aa18.63■□□□□ 0.57
MAP1LC3B-206ENST00000564844 SULT1B1O43704 296 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms