RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 NATD1Q8N6N6 113 aa6.46□□□□□ -1.38
HERPUD1-206ENST00000563343 ZSCAN4Q8NAM6 433 aaPredicted RBP6.46□□□□□ -1.38
HERPUD1-206ENST00000563343 MGARPQ8TDB4 240 aa6.46□□□□□ -1.38
HERPUD1-206ENST00000563343 DYRK2Q92630 601 aa6.46□□□□□ -1.38
HERPUD1-206ENST00000563343 PPP1R14AQ96A00 147 aa6.46□□□□□ -1.38
HERPUD1-206ENST00000563343 LRR1Q96L50 414 aa6.46□□□□□ -1.38
HERPUD1-206ENST00000563343 OXGR1Q96P68 337 aa6.46□□□□□ -1.38
HERPUD1-206ENST00000563343 SIGLEC11Q96RL6 698 aa6.46□□□□□ -1.38
HERPUD1-206ENST00000563343 FOXB1Q99853 325 aa6.46□□□□□ -1.38
HERPUD1-206ENST00000563343 SLC30A2Q9BRI3 323 aa6.46□□□□□ -1.38
HERPUD1-206ENST00000563343 RASSF4Q9H2L5 321 aa6.46□□□□□ -1.38
HERPUD1-206ENST00000563343 KCNF1Q9H3M0 494 aa6.46□□□□□ -1.38
HERPUD1-206ENST00000563343 C16orf95Q9H693 158 aa6.46□□□□□ -1.38
HERPUD1-206ENST00000563343 NECAP2Q9NVZ3 263 aa6.46□□□□□ -1.38
HERPUD1-206ENST00000563343 GIMAP2Q9UG22 337 aa6.46□□□□□ -1.38
HERPUD1-206ENST00000563343 FBXL3Q9UKT7 428 aa6.46□□□□□ -1.38
HERPUD1-206ENST00000563343 DNAJC15Q9Y5T4 150 aa6.46□□□□□ -1.38
HERPUD1-206ENST00000563343 POMT1Q9Y6A1 747 aa6.46□□□□□ -1.38
HERPUD1-206ENST00000563343 SAR1BQ9Y6B6 198 aa6.46□□□□□ -1.38
HERPUD1-206ENST00000563343 IGHV2-70DA0A0C4DH43 119 aa6.45□□□□□ -1.38
HERPUD1-206ENST00000563343 POC1B-GALNT4F8VUJ3 575 aa6.45□□□□□ -1.38
HERPUD1-206ENST00000563343 CFLARO15519 480 aa6.45□□□□□ -1.38
HERPUD1-206ENST00000563343 SPRY3O43610 288 aa6.45□□□□□ -1.38
HERPUD1-206ENST00000563343 SNAP29O95721 258 aa6.45□□□□□ -1.38
HERPUD1-206ENST00000563343 CD55P08174 381 aa6.45□□□□□ -1.38
HERPUD1-206ENST00000563343 SNRPAP09012 282 aaKnown RBP6.45□□□□□ -1.38
HERPUD1-206ENST00000563343 WNT2P09544 360 aa6.45□□□□□ -1.38
HERPUD1-206ENST00000563343 SBK2P0C263 348 aa6.45□□□□□ -1.38
HERPUD1-206ENST00000563343 LINC00032P0C843 101 aa6.45□□□□□ -1.38
HERPUD1-206ENST00000563343 MYZAPP0CAP1 466 aa6.45□□□□□ -1.38
HERPUD1-206ENST00000563343 THRBP10828 461 aa6.45□□□□□ -1.38
HERPUD1-206ENST00000563343 HLA-DOBP13765 273 aa6.45□□□□□ -1.38
HERPUD1-206ENST00000563343 PHBP35232 272 aa6.45□□□□□ -1.38
HERPUD1-206ENST00000563343 PAFAH1B1P43034 410 aa6.45□□□□□ -1.38
HERPUD1-206ENST00000563343 UCP2P55851 309 aa6.45□□□□□ -1.38
HERPUD1-206ENST00000563343 SELENOVP59797 346 aa6.45□□□□□ -1.38
HERPUD1-206ENST00000563343 GLO1Q04760 184 aa6.45□□□□□ -1.38
HERPUD1-206ENST00000563343 RBBP4Q09028 425 aa6.45□□□□□ -1.38
HERPUD1-206ENST00000563343 ZMYND11Q15326 602 aa6.45□□□□□ -1.38
HERPUD1-206ENST00000563343 GALNTL6Q49A17 601 aa6.45□□□□□ -1.38
HERPUD1-206ENST00000563343 MRPL2Q5T653 305 aaKnown RBP6.45□□□□□ -1.38
HERPUD1-206ENST00000563343 TNFAIP8L2Q6P589 184 aaPredicted RBP6.45□□□□□ -1.38
HERPUD1-206ENST00000563343 ZYG11AQ6WRX3 759 aa6.45□□□□□ -1.38
HERPUD1-206ENST00000563343 SPICQ8N5J4 248 aa6.45□□□□□ -1.38
HERPUD1-206ENST00000563343 ZNF283Q8N7M2 679 aa6.45□□□□□ -1.38
HERPUD1-206ENST00000563343 PLPP7Q8NBV4 271 aa6.45□□□□□ -1.38
HERPUD1-206ENST00000563343 SLC30A7Q8NEW0 376 aa6.45□□□□□ -1.38
HERPUD1-206ENST00000563343 SPATA4Q8NEY3 305 aa6.45□□□□□ -1.38
HERPUD1-206ENST00000563343 STK35Q8TDR2 534 aa6.45□□□□□ -1.38
HERPUD1-206ENST00000563343 XAGE5Q8WWM1 108 aa6.45□□□□□ -1.38
HERPUD1-206ENST00000563343 GEMIN6Q8WXD5 167 aaKnown RBP6.45□□□□□ -1.38
HERPUD1-206ENST00000563343 C11orf40Q8WZ69 217 aa6.45□□□□□ -1.38
HERPUD1-206ENST00000563343 NEURL3Q96EH8 262 aa6.45□□□□□ -1.38
HERPUD1-206ENST00000563343 DUSP26Q9BV47 211 aa6.45□□□□□ -1.38
HERPUD1-206ENST00000563343 OR51B6Q9H340 312 aa6.45□□□□□ -1.38
HERPUD1-206ENST00000563343 IL20RAQ9UHF4 553 aa6.45□□□□□ -1.38
HERPUD1-206ENST00000563343 PRDM4Q9UKN5 801 aa6.45□□□□□ -1.38
HERPUD1-206ENST00000563343 SACSQ9NZJ4 4579 aa6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 MS4A18H0YCH9 400 aa6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 K7EIL1 84 aa6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 M0R082 166 aa6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 HMGN4O00479 90 aa6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 TNFRSF13BO14836 293 aaPredicted RBP6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 AZIN1O14977 448 aa6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 DHHO43323 396 aa6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 PIP5K1CO60331 668 aa6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 CRCPO75575 148 aa6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 AHSA1O95433 338 aa6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 AGR2O95994 175 aa6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 HPRP00739 348 aa6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 LCKP06239 509 aa6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 GSTA1P08263 222 aa6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 GKN3PP0CG01 181 aa6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 FUT4P22083 530 aa6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 VAMP1P23763 118 aa6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 MPV17P39210 176 aa6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 RPS5P46782 204 aaKnown RBP6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 DNAJB13P59910 316 aa6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 NAA20P61599 178 aa6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 PMS2P3Q13401 168 aa6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 CAMK2DQ13557 499 aa6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 MAPK11Q15759 364 aa6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 SYPL1Q16563 259 aa6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 MS4A18Q3C1V0 323 aa6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 UGT3A2Q3SY77 523 aa6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 GPAT3Q53EU6 434 aa6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 COX20Q5RI15 118 aa6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 ATAD3BQ5T9A4 648 aa6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 CARD17Q5XLA6 110 aa6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 KANK2Q63ZY3 851 aa6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 WBP2NLQ6ICG8 309 aa6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 C6orf89Q6UWU4 347 aa6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 LRRN1Q6UXK5 716 aa6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 WDR88Q6ZMY6 472 aa6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 KLHL36Q8N4N3 616 aa6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 ANKFN1Q8N957 763 aa6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 ZNF417Q8TAU3 575 aa6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 PNPT1Q8TCS8 783 aaKnown RBP6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 IPCEF1Q8WWN9 437 aaPredicted RBP6.44□□□□□ -1.38
HERPUD1-206ENST00000563343 SLC25A36Q96CQ1 311 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms