RNA–Protein interactions for RNA: ENST00000563283.1

CNOT1-205, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-205ENST00000563283 FAM83FQ8NEG4 500 aaPredicted RBP4.56□□□□□ -1.68
CNOT1-205ENST00000563283 ATP6V1C2Q8NEY4 427 aa4.56□□□□□ -1.68
CNOT1-205ENST00000563283 NEIL3Q8TAT5 605 aa4.56□□□□□ -1.68
CNOT1-205ENST00000563283 SSC4DQ8WTU2 575 aa4.56□□□□□ -1.68
CNOT1-205ENST00000563283 CANT1Q8WVQ1 401 aa4.56□□□□□ -1.68
CNOT1-205ENST00000563283 PYDC1Q8WXC3 89 aa4.56□□□□□ -1.68
CNOT1-205ENST00000563283 TMEM234Q8WY98 164 aa4.56□□□□□ -1.68
CNOT1-205ENST00000563283 ST8SIA1Q92185 356 aa4.56□□□□□ -1.68
CNOT1-205ENST00000563283 SMPDL3BQ92485 455 aa4.56□□□□□ -1.68
CNOT1-205ENST00000563283 STMN2Q93045 179 aa4.56□□□□□ -1.68
CNOT1-205ENST00000563283 POP5Q969H6 163 aaKnown RBP4.56□□□□□ -1.68
CNOT1-205ENST00000563283 SLC35B4Q969S0 331 aa4.56□□□□□ -1.68
CNOT1-205ENST00000563283 WDYHV1Q96HA8 205 aa4.56□□□□□ -1.68
CNOT1-205ENST00000563283 PRRC1Q96M27 445 aa4.56□□□□□ -1.68
CNOT1-205ENST00000563283 ZNF559Q9BR84 538 aa4.56□□□□□ -1.68
CNOT1-205ENST00000563283 CHID1Q9BWS9 393 aa4.56□□□□□ -1.68
CNOT1-205ENST00000563283 OR2B2Q9GZK3 357 aa4.56□□□□□ -1.68
CNOT1-205ENST00000563283 MAGIXQ9H6Y5 334 aa4.56□□□□□ -1.68
CNOT1-205ENST00000563283 TMEM185BQ9H7F4 350 aa4.56□□□□□ -1.68
CNOT1-205ENST00000563283 EVA1AQ9H8M9 152 aa4.56□□□□□ -1.68
CNOT1-205ENST00000563283 TMEM27Q9HBJ8 222 aa4.56□□□□□ -1.68
CNOT1-205ENST00000563283 ACER3Q9NUN7 267 aa4.56□□□□□ -1.68
CNOT1-205ENST00000563283 NDUFAF4Q9P032 175 aa4.56□□□□□ -1.68
CNOT1-205ENST00000563283 RHCGQ9UBD6 479 aa4.56□□□□□ -1.68
CNOT1-205ENST00000563283 SH3BGRL2Q9UJC5 107 aa4.56□□□□□ -1.68
CNOT1-205ENST00000563283 ENPP4Q9Y6X5 453 aa4.56□□□□□ -1.68
CNOT1-205ENST00000563283 CELSR1Q9NYQ6 3014 aa4.56□□□□□ -1.68
CNOT1-205ENST00000563283 ABCA12Q86UK0 2595 aa4.56□□□□□ -1.68
CNOT1-205ENST00000563283 SPTBN1Q01082 2364 aaKnown RBP4.55□□□□□ -1.68
CNOT1-205ENST00000563283 hCG_2014768A0A024R1R8 64 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 TMED7-TICAM2A0A0A6YYA0 188 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 A0A0B4J2E0 115 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 A0A1B0GUH1 482 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 A0A1B0GX12 115 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 OR2M5A3KFT3 312 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 TRAPPC13A5PLN9 417 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 H0YHG0 523 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 H7C1Q1 480 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 FAAHO00519 579 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 KPNA4O00629 521 aaPredicted RBP4.55□□□□□ -1.68
CNOT1-205ENST00000563283 FFAR1O14842 300 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 SEC14L5O43304 696 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 HCN1O60741 890 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 FMO6PO60774 539 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 FKBP6O75344 327 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 ENTPD5O75356 428 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 TIPRLO75663 272 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 OR5F1O95221 314 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 NTN1O95631 604 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 OPN1LWP04000 364 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 H1F0P07305 194 aaKnown RBP4.55□□□□□ -1.68
CNOT1-205ENST00000563283 TFPIP10646 304 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 PEPDP12955 493 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 CPN1P15169 458 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 ZNF17P17021 662 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 ITGA2P17301 1181 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 RHCEP18577 417 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 CXCR1P25024 350 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 SHC1P29353 583 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 MPGP29372 298 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 SLC7A1P30825 629 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 IFNA8P32881 189 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 SFTPDP35247 375 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 EIF1P41567 113 aaKnown RBP4.55□□□□□ -1.68
CNOT1-205ENST00000563283 MAGEA2P43356 314 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 HTR3AP46098 478 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 LHX2P50458 406 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 POLR2HP52434 150 aaKnown RBP4.55□□□□□ -1.68
CNOT1-205ENST00000563283 CDH12P55289 794 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 CLDN18P56856 261 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 CLDN20P56880 219 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 NUP107P57740 925 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 HOXA4Q00056 320 aaPredicted RBP4.55□□□□□ -1.68
CNOT1-205ENST00000563283 SPIBQ01892 262 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 TFF3Q07654 80 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 ZIK1Q3SY52 487 aaPredicted RBP4.55□□□□□ -1.68
CNOT1-205ENST00000563283 ALG10BQ5I7T1 473 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 FGD3Q5JSP0 725 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 MORN5Q5VZ52 161 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 C11orf87Q6NUJ2 197 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 ARHGAP11AQ6P4F7 1023 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 AAGABQ6PD74 315 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 ZNF613Q6PF04 617 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 ULK3Q6PHR2 472 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 GRINAQ7Z429 371 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 TSEN54Q7Z6J9 526 aaKnown RBP4.55□□□□□ -1.68
CNOT1-205ENST00000563283 CCDC71Q8IV32 467 aaPredicted RBP4.55□□□□□ -1.68
CNOT1-205ENST00000563283 P3H2Q8IVL5 708 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 UBQLNLQ8IYU4 475 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 OFCC1Q8IZS5 231 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 GTPBP8Q8N3Z3 284 aaPredicted RBP4.55□□□□□ -1.68
CNOT1-205ENST00000563283 ACBD4Q8NC06 268 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 ADAMTS16Q8TE57 1224 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 PHF10Q8WUB8 498 aaKnown RBP4.55□□□□□ -1.68
CNOT1-205ENST00000563283 DNAJA4Q8WW22 397 aaPredicted RBP4.55□□□□□ -1.68
CNOT1-205ENST00000563283 SLCO4A1Q96BD0 722 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 C3orf49Q96BT1 292 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 DNAJA3Q96EY1 480 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 SLC41A3Q96GZ6 507 aa4.55□□□□□ -1.68
CNOT1-205ENST00000563283 C7orf34Q96L11 122 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms