RNA–Protein interactions for RNA: ENST00000563255.1

CDH11-207, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 545 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-207ENST00000563255 TMEM45BQ96B21 275 aa13.11□□□□□ -0.31
CDH11-207ENST00000563255 RASD2Q96D21 266 aa13.11□□□□□ -0.31
CDH11-207ENST00000563255 TXNDC15Q96J42 360 aa13.11□□□□□ -0.31
CDH11-207ENST00000563255 CNBD2Q96M20 576 aa13.11□□□□□ -0.31
CDH11-207ENST00000563255 TRIB1Q96RU8 372 aa13.11□□□□□ -0.31
CDH11-207ENST00000563255 MED29Q9NX70 200 aa13.11□□□□□ -0.31
CDH11-207ENST00000563255 RIIAD1A6NNX1 92 aa13.1□□□□□ -0.31
CDH11-207ENST00000563255 TLX2O43763 284 aaPredicted RBP13.1□□□□□ -0.31
CDH11-207ENST00000563255 SLC2A10O95528 541 aa13.1□□□□□ -0.31
CDH11-207ENST00000563255 CLDN1O95832 211 aa13.1□□□□□ -0.31
CDH11-207ENST00000563255 TGM6O95932 706 aa13.1□□□□□ -0.31
CDH11-207ENST00000563255 ZNF3P17036 446 aa13.1□□□□□ -0.31
CDH11-207ENST00000563255 CDKN2AP42771 156 aaKnown RBP13.1□□□□□ -0.31
CDH11-207ENST00000563255 BIDP55957 195 aa13.1□□□□□ -0.31
CDH11-207ENST00000563255 CLDN17P56750 224 aa13.1□□□□□ -0.31
CDH11-207ENST00000563255 CD47Q08722 323 aa13.1□□□□□ -0.31
CDH11-207ENST00000563255 ITGADQ13349 1161 aa13.1□□□□□ -0.31
CDH11-207ENST00000563255 TOP3AQ13472 1001 aaPredicted RBP13.1□□□□□ -0.31
CDH11-207ENST00000563255 MELKQ14680 651 aa13.1□□□□□ -0.31
CDH11-207ENST00000563255 OCLNQ16625 522 aa13.1□□□□□ -0.31
CDH11-207ENST00000563255 MESTQ5EB52 335 aa13.1□□□□□ -0.31
CDH11-207ENST00000563255 EEF1A1P5Q5VTE0 462 aa13.1□□□□□ -0.31
CDH11-207ENST00000563255 MEDAGQ5VYS4 303 aa13.1□□□□□ -0.31
CDH11-207ENST00000563255 P4HA3Q7Z4N8 544 aa13.1□□□□□ -0.31
CDH11-207ENST00000563255 CD163Q86VB7 1156 aa13.1□□□□□ -0.31
CDH11-207ENST00000563255 JAZF1Q86VZ6 243 aa13.1□□□□□ -0.31
CDH11-207ENST00000563255 MCEMP1Q8IX19 187 aa13.1□□□□□ -0.31
CDH11-207ENST00000563255 SLC37A3Q8NCC5 494 aa13.1□□□□□ -0.31
CDH11-207ENST00000563255 NPEPL1Q8NDH3 523 aa13.1□□□□□ -0.31
CDH11-207ENST00000563255 OR4K13Q8NH42 304 aa13.1□□□□□ -0.31
CDH11-207ENST00000563255 UBE2FQ969M7 185 aa13.1□□□□□ -0.31
CDH11-207ENST00000563255 SLC25A44Q96H78 314 aaPredicted RBP13.1□□□□□ -0.31
CDH11-207ENST00000563255 ZNF385AQ96PM9 386 aaKnown RBP13.1□□□□□ -0.31
CDH11-207ENST00000563255 TP63Q9H3D4 680 aaPredicted RBP13.1□□□□□ -0.31
CDH11-207ENST00000563255 EMC3Q9P0I2 261 aa13.1□□□□□ -0.31
CDH11-207ENST00000563255 RCE1Q9Y256 329 aa13.1□□□□□ -0.31
CDH11-207ENST00000563255 SLC5A6Q9Y289 635 aa13.1□□□□□ -0.31
CDH11-207ENST00000563255 LRCH1Q9Y2L9 728 aa13.1□□□□□ -0.31
CDH11-207ENST00000563255 ALPK2Q86TB3 2170 aa13.1□□□□□ -0.31
CDH11-207ENST00000563255 SLC35F4A4IF30 521 aa13.09□□□□□ -0.31
CDH11-207ENST00000563255 MBD3L4A6NDZ8 208 aaPredicted RBP13.09□□□□□ -0.31
CDH11-207ENST00000563255 MBD3L3A6NE82 208 aaPredicted RBP13.09□□□□□ -0.31
CDH11-207ENST00000563255 WIPF3A6NGB9 483 aa13.09□□□□□ -0.31
CDH11-207ENST00000563255 MBD3L5A6NJ08 208 aaPredicted RBP13.09□□□□□ -0.31
CDH11-207ENST00000563255 ZNF726A6NNF4 738 aa13.09□□□□□ -0.31
CDH11-207ENST00000563255 PRR23D1E9PI22 279 aaPredicted RBP13.09□□□□□ -0.31
CDH11-207ENST00000563255 M0R3G1 203 aa13.09□□□□□ -0.31
CDH11-207ENST00000563255 XKRYO14609 159 aa13.09□□□□□ -0.31
CDH11-207ENST00000563255 ARHGEF9O43307 516 aa13.09□□□□□ -0.31
CDH11-207ENST00000563255 SLC19A2O60779 497 aa13.09□□□□□ -0.31
CDH11-207ENST00000563255 TRMUO75648 421 aaKnown RBP13.09□□□□□ -0.31
CDH11-207ENST00000563255 ZNF432O94892 652 aa13.09□□□□□ -0.31
CDH11-207ENST00000563255 YES1P07947 543 aa13.09□□□□□ -0.31
CDH11-207ENST00000563255 PRR23D2P0DMB1 279 aaPredicted RBP13.09□□□□□ -0.31
CDH11-207ENST00000563255 PAICSP22234 425 aaKnown RBP13.09□□□□□ -0.31
CDH11-207ENST00000563255 ACVR2AP27037 513 aa13.09□□□□□ -0.31
CDH11-207ENST00000563255 CDK5R2Q13319 367 aa13.09□□□□□ -0.31
CDH11-207ENST00000563255 FREM1Q5H8C1 2179 aa13.09□□□□□ -0.31
CDH11-207ENST00000563255 TMEM201Q5SNT2 666 aa13.09□□□□□ -0.31
CDH11-207ENST00000563255 C1orf185Q5T7R7 199 aa13.09□□□□□ -0.31
CDH11-207ENST00000563255 RTL6Q6ICC9 239 aa13.09□□□□□ -0.31
CDH11-207ENST00000563255 OR2A2Q6IF42 318 aa13.09□□□□□ -0.31
CDH11-207ENST00000563255 KRT80Q6KB66 452 aa13.09□□□□□ -0.31
CDH11-207ENST00000563255 LEG1Q6P5S2 330 aa13.09□□□□□ -0.31
CDH11-207ENST00000563255 PLXDC2Q6UX71 529 aa13.09□□□□□ -0.31
CDH11-207ENST00000563255 SDR9C7Q8NEX9 313 aa13.09□□□□□ -0.31
CDH11-207ENST00000563255 MBD3L2Q8NHZ7 208 aaPredicted RBP13.09□□□□□ -0.31
CDH11-207ENST00000563255 FNDC8Q8TC99 324 aa13.09□□□□□ -0.31
CDH11-207ENST00000563255 APH1BQ8WW43 257 aa13.09□□□□□ -0.31
CDH11-207ENST00000563255 HDAC2Q92769 488 aaKnown RBP13.09□□□□□ -0.31
CDH11-207ENST00000563255 INTS12Q96CB8 462 aaKnown RBP13.09□□□□□ -0.31
CDH11-207ENST00000563255 GMPPAQ96IJ6 420 aaPredicted RBP13.09□□□□□ -0.31
CDH11-207ENST00000563255 Q96MT0 163 aa13.09□□□□□ -0.31
CDH11-207ENST00000563255 IL4I1Q96RQ9 567 aa13.09□□□□□ -0.31
CDH11-207ENST00000563255 KCNK17Q96T54 332 aa13.09□□□□□ -0.31
CDH11-207ENST00000563255 NMNAT3Q96T66 252 aa13.09□□□□□ -0.31
CDH11-207ENST00000563255 TM9SF2Q99805 663 aa13.09□□□□□ -0.31
CDH11-207ENST00000563255 EMC6Q9BV81 110 aa13.09□□□□□ -0.31
CDH11-207ENST00000563255 MRPL13Q9BYD1 178 aaKnown RBP13.09□□□□□ -0.31
CDH11-207ENST00000563255 HINT3Q9NQE9 182 aaKnown RBP13.09□□□□□ -0.31
CDH11-207ENST00000563255 RASSF1Q9NS23 344 aa13.09□□□□□ -0.31
CDH11-207ENST00000563255 PARPBPQ9NWS1 579 aa13.09□□□□□ -0.31
CDH11-207ENST00000563255 VSX1Q9NZR4 365 aaPredicted RBP13.09□□□□□ -0.31
CDH11-207ENST00000563255 PRSS37A4D1T9 235 aa13.08□□□□□ -0.32
CDH11-207ENST00000563255 OR6C68A6NDL8 312 aa13.08□□□□□ -0.32
CDH11-207ENST00000563255 KDM4EB2RXH2 506 aaPredicted RBP13.08□□□□□ -0.32
CDH11-207ENST00000563255 SS18L1O75177 396 aaPredicted RBP13.08□□□□□ -0.32
CDH11-207ENST00000563255 WBP4O75554 376 aaKnown RBP13.08□□□□□ -0.32
CDH11-207ENST00000563255 RENP00797 406 aa13.08□□□□□ -0.32
CDH11-207ENST00000563255 IGHG1P01857 330 aa13.08□□□□□ -0.32
CDH11-207ENST00000563255 PGA4P0DJD7 388 aa13.08□□□□□ -0.32
CDH11-207ENST00000563255 PGA3P0DJD8 388 aa13.08□□□□□ -0.32
CDH11-207ENST00000563255 TIMP3P35625 211 aa13.08□□□□□ -0.32
CDH11-207ENST00000563255 SLC25A1P53007 311 aa13.08□□□□□ -0.32
CDH11-207ENST00000563255 CXCR4P61073 352 aa13.08□□□□□ -0.32
CDH11-207ENST00000563255 CRMP1Q14194 572 aa13.08□□□□□ -0.32
CDH11-207ENST00000563255 HIST3H3Q16695 136 aa13.08□□□□□ -0.32
CDH11-207ENST00000563255 AADACL4Q5VUY2 407 aa13.08□□□□□ -0.32
CDH11-207ENST00000563255 NXNL2Q5VZ03 156 aa13.08□□□□□ -0.32
CDH11-207ENST00000563255 RPTNQ6XPR3 784 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms