RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 KRT36O76013 467 aa5.43□□□□□ -1.54
CNOT1-204ENST00000563130 GADD45GO95257 159 aa5.43□□□□□ -1.54
CNOT1-204ENST00000563130 F13BP05160 661 aa5.43□□□□□ -1.54
CNOT1-204ENST00000563130 ZNF26P17031 533 aaPredicted RBP5.43□□□□□ -1.54
CNOT1-204ENST00000563130 EPHA1P21709 976 aa5.43□□□□□ -1.54
CNOT1-204ENST00000563130 RRM2P31350 389 aa5.43□□□□□ -1.54
CNOT1-204ENST00000563130 GATA4P43694 442 aa5.43□□□□□ -1.54
CNOT1-204ENST00000563130 SMIM11AP58511 58 aa5.43□□□□□ -1.54
CNOT1-204ENST00000563130 TGFBR3Q03167 851 aa5.43□□□□□ -1.54
CNOT1-204ENST00000563130 HIST3H3Q16695 136 aa5.43□□□□□ -1.54
CNOT1-204ENST00000563130 ARMC4Q5T2S8 1044 aa5.43□□□□□ -1.54
CNOT1-204ENST00000563130 ASRGL1Q7L266 308 aa5.43□□□□□ -1.54
CNOT1-204ENST00000563130 ZNF627Q7L945 461 aa5.43□□□□□ -1.54
CNOT1-204ENST00000563130 ABHD12BQ7Z5M8 362 aaPredicted RBP5.43□□□□□ -1.54
CNOT1-204ENST00000563130 ZER1Q7Z7L7 766 aa5.43□□□□□ -1.54
CNOT1-204ENST00000563130 WDR31Q8NA23 367 aa5.43□□□□□ -1.54
CNOT1-204ENST00000563130 OR52J3Q8NH60 311 aa5.43□□□□□ -1.54
CNOT1-204ENST00000563130 MOSPD2Q8NHP6 518 aa5.43□□□□□ -1.54
CNOT1-204ENST00000563130 CANT1Q8WVQ1 401 aa5.43□□□□□ -1.54
CNOT1-204ENST00000563130 SLC25A44Q96H78 314 aaPredicted RBP5.43□□□□□ -1.54
CNOT1-204ENST00000563130 ZC3HAV1LQ96H79 300 aaKnown RBP5.43□□□□□ -1.54
CNOT1-204ENST00000563130 LURAP1Q96LR2 239 aa5.43□□□□□ -1.54
CNOT1-204ENST00000563130 ALPK1Q96QP1 1244 aa5.43□□□□□ -1.54
CNOT1-204ENST00000563130 GPA33Q99795 319 aa5.43□□□□□ -1.54
CNOT1-204ENST00000563130 MRPL13Q9BYD1 178 aaKnown RBP5.43□□□□□ -1.54
CNOT1-204ENST00000563130 CLEC4MQ9H2X3 399 aaPredicted RBP5.43□□□□□ -1.54
CNOT1-204ENST00000563130 NELFAQ9H3P2 528 aa5.43□□□□□ -1.54
CNOT1-204ENST00000563130 SIGLEC7Q9Y286 467 aa5.43□□□□□ -1.54
CNOT1-204ENST00000563130 TMEM5Q9Y2B1 443 aa5.43□□□□□ -1.54
CNOT1-204ENST00000563130 LYVE1Q9Y5Y7 322 aa5.43□□□□□ -1.54
CNOT1-204ENST00000563130 SLC25A15Q9Y619 301 aa5.43□□□□□ -1.54
CNOT1-204ENST00000563130 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.42□□□□□ -1.54
CNOT1-204ENST00000563130 TCRBV3S1A0A5B6 114 aa5.42□□□□□ -1.54
CNOT1-204ENST00000563130 CIB4A0PJX0 185 aa5.42□□□□□ -1.54
CNOT1-204ENST00000563130 EFCAB9A8MZ26 197 aa5.42□□□□□ -1.54
CNOT1-204ENST00000563130 CENPBD1B2RD01 187 aa5.42□□□□□ -1.54
CNOT1-204ENST00000563130 ZNF587BE7ETH6 402 aa5.42□□□□□ -1.54
CNOT1-204ENST00000563130 CLOCKO15516 846 aa5.42□□□□□ -1.54
CNOT1-204ENST00000563130 SERPINI2O75830 405 aa5.42□□□□□ -1.54
CNOT1-204ENST00000563130 BCL10O95999 233 aa5.42□□□□□ -1.54
CNOT1-204ENST00000563130 IGHMP01871 453 aa5.42□□□□□ -1.54
CNOT1-204ENST00000563130 PGA4P0DJD7 388 aa5.42□□□□□ -1.54
CNOT1-204ENST00000563130 PGA3P0DJD8 388 aa5.42□□□□□ -1.54
CNOT1-204ENST00000563130 RAP2AP10114 183 aa5.42□□□□□ -1.54
CNOT1-204ENST00000563130 SAGP10523 405 aaPredicted RBP5.42□□□□□ -1.54
CNOT1-204ENST00000563130 HOXB6P17509 224 aaKnown RBP5.42□□□□□ -1.54
CNOT1-204ENST00000563130 GPR4P46093 362 aa5.42□□□□□ -1.54
CNOT1-204ENST00000563130 BIDP55957 195 aa5.42□□□□□ -1.54
CNOT1-204ENST00000563130 FXYD6P3P58550 94 aa5.42□□□□□ -1.54
CNOT1-204ENST00000563130 PRPS1P60891 318 aa5.42□□□□□ -1.54
CNOT1-204ENST00000563130 IL1RL1Q01638 556 aa5.42□□□□□ -1.54
CNOT1-204ENST00000563130 SPIBQ01892 262 aa5.42□□□□□ -1.54
CNOT1-204ENST00000563130 ROR2Q01974 943 aaKnown RBP5.42□□□□□ -1.54
CNOT1-204ENST00000563130 CHRNB3Q05901 458 aa5.42□□□□□ -1.54
CNOT1-204ENST00000563130 RUNX1T1Q06455 604 aa5.42□□□□□ -1.54
CNOT1-204ENST00000563130 CAMK2DQ13557 499 aa5.42□□□□□ -1.54
CNOT1-204ENST00000563130 FLOT2Q14254 428 aa5.42□□□□□ -1.54
CNOT1-204ENST00000563130 STK11Q15831 433 aa5.42□□□□□ -1.54
CNOT1-204ENST00000563130 ACKR1Q16570 336 aa5.42□□□□□ -1.54
CNOT1-204ENST00000563130 FAM98BQ52LJ0 330 aaKnown RBP5.42□□□□□ -1.54
CNOT1-204ENST00000563130 ALG10Q5BKT4 473 aa5.42□□□□□ -1.54
CNOT1-204ENST00000563130 BEX5Q5H9J7 111 aa5.42□□□□□ -1.54
CNOT1-204ENST00000563130 FGD3Q5JSP0 725 aa5.42□□□□□ -1.54
CNOT1-204ENST00000563130 ZNF770Q6IQ21 691 aaPredicted RBP5.42□□□□□ -1.54
CNOT1-204ENST00000563130 C1orf94Q6P1W5 598 aa5.42□□□□□ -1.54
CNOT1-204ENST00000563130 SHISA2Q6UWI4 295 aa5.42□□□□□ -1.54
CNOT1-204ENST00000563130 RRM2BQ7LG56 351 aa5.42□□□□□ -1.54
CNOT1-204ENST00000563130 OAFQ86UD1 273 aa5.42□□□□□ -1.54
CNOT1-204ENST00000563130 MEX3DQ86XN8 651 aaKnown RBP5.42□□□□□ -1.54
CNOT1-204ENST00000563130 CDC20BQ86Y33 519 aa5.42□□□□□ -1.54
CNOT1-204ENST00000563130 CDK20Q8IZL9 346 aa5.42□□□□□ -1.54
CNOT1-204ENST00000563130 OR4C15Q8NGM1 316 aa5.42□□□□□ -1.54
CNOT1-204ENST00000563130 OR1K1Q8NGR3 316 aa5.42□□□□□ -1.54
CNOT1-204ENST00000563130 OR51A7Q8NH64 312 aa5.42□□□□□ -1.54
CNOT1-204ENST00000563130 MAGEE2Q8TD90 523 aaPredicted RBP5.42□□□□□ -1.54
CNOT1-204ENST00000563130 TMEM54Q969K7 222 aa5.42□□□□□ -1.54
CNOT1-204ENST00000563130 NMD3Q96D46 503 aaKnown RBP5.42□□□□□ -1.54
CNOT1-204ENST00000563130 FAM46AQ96IP4 442 aaKnown RBP5.42□□□□□ -1.54
CNOT1-204ENST00000563130 LRGUKQ96M69 825 aa5.42□□□□□ -1.54
CNOT1-204ENST00000563130 TNFRSF13CQ96RJ3 184 aa5.42□□□□□ -1.54
CNOT1-204ENST00000563130 TMEM204Q9BSN7 226 aa5.42□□□□□ -1.54
CNOT1-204ENST00000563130 POLDIP3Q9BY77 421 aaKnown RBP5.42□□□□□ -1.54
CNOT1-204ENST00000563130 TRIM15Q9C019 465 aa5.42□□□□□ -1.54
CNOT1-204ENST00000563130 PLEKHF2Q9H8W4 249 aa5.42□□□□□ -1.54
CNOT1-204ENST00000563130 LIN7BQ9HAP6 207 aa5.42□□□□□ -1.54
CNOT1-204ENST00000563130 CRLF2Q9HC73 371 aa5.42□□□□□ -1.54
CNOT1-204ENST00000563130 GPR35Q9HC97 309 aa5.42□□□□□ -1.54
CNOT1-204ENST00000563130 INIPQ9NRY2 104 aa5.42□□□□□ -1.54
CNOT1-204ENST00000563130 NPAP1Q9NZP6 1156 aa5.42□□□□□ -1.54
CNOT1-204ENST00000563130 TRAV27A0A087WT01 109 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 A0A1W2PRG6 482 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 DHRS12A0PJE2 317 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 ZNF726A6NNF4 738 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 ZNF99A8MXY4 864 aaPredicted RBP5.41□□□□□ -1.54
CNOT1-204ENST00000563130 ZNF133P52736 654 aaPredicted RBP5.41□□□□□ -1.54
CNOT1-204ENST00000563130 SH3BGRP55822 239 aaPredicted RBP5.41□□□□□ -1.54
CNOT1-204ENST00000563130 MELKQ14680 651 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 PPA1Q15181 289 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 TAF11Q15544 211 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 CEACAM16Q2WEN9 425 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms