RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 TMEM106AQ96A25 262 aa15.03■□□□□ -0
TPM1-228ENST00000560975 MRPL48Q96GC5 212 aaKnown RBP15.03■□□□□ -0
TPM1-228ENST00000560975 ADAD1Q96M93 576 aaKnown RBP15.03■□□□□ -0
TPM1-228ENST00000560975 LMF1Q96S06 567 aa15.03■□□□□ -0
TPM1-228ENST00000560975 SFXN1Q9H9B4 322 aa15.03■□□□□ -0
TPM1-228ENST00000560975 ZMAT3Q9HA38 289 aaKnown RBP15.03■□□□□ -0
TPM1-228ENST00000560975 DHCR7Q9UBM7 475 aaKnown RBP15.03■□□□□ -0
TPM1-228ENST00000560975 A0A0B4J2E0 115 aa15.02■□□□□ -0
TPM1-228ENST00000560975 A0A1B0GX12 115 aa15.02■□□□□ -0
TPM1-228ENST00000560975 MEX3AA1L020 520 aaKnown RBP15.02■□□□□ -0
TPM1-228ENST00000560975 MANSC4A6NHS7 340 aaPredicted RBP15.02■□□□□ -0
TPM1-228ENST00000560975 LRRC72A6NJI9 287 aa15.02■□□□□ -0
TPM1-228ENST00000560975 ZNF705EA8MWA4 302 aaPredicted RBP15.02■□□□□ -0
TPM1-228ENST00000560975 RAD1O60671 282 aa15.02■□□□□ -0
TPM1-228ENST00000560975 ALOX12BO75342 701 aa15.02■□□□□ -0
TPM1-228ENST00000560975 ITGB2P05107 769 aa15.02■□□□□ -0
TPM1-228ENST00000560975 CASRP41180 1078 aa15.02■□□□□ -0
TPM1-228ENST00000560975 DHRS2Q13268 280 aa15.02■□□□□ -0
TPM1-228ENST00000560975 ACOT7LQ6ZUV0 252 aa15.02■□□□□ -0
TPM1-228ENST00000560975 FAM220AQ7Z4H9 259 aa15.02■□□□□ -0
TPM1-228ENST00000560975 OR4K14Q8NGD5 310 aa15.02■□□□□ -0
TPM1-228ENST00000560975 ATG5Q9H1Y0 275 aa15.02■□□□□ -0
TPM1-228ENST00000560975 TMEM74BQ9NUR3 256 aa15.02■□□□□ -0
TPM1-228ENST00000560975 ZNF860A6NHJ4 632 aa15.02□□□□□ -0.01
TPM1-228ENST00000560975 CXCL14O95715 111 aa15.02□□□□□ -0.01
TPM1-228ENST00000560975 C8AP07357 584 aa15.02□□□□□ -0.01
TPM1-228ENST00000560975 CD96P40200 585 aa15.02□□□□□ -0.01
TPM1-228ENST00000560975 PNLIPRP2P54317 469 aa15.02□□□□□ -0.01
TPM1-228ENST00000560975 ALKBH1Q13686 389 aaKnown RBP15.02□□□□□ -0.01
TPM1-228ENST00000560975 ARHGAP40Q5TG30 622 aa15.02□□□□□ -0.01
TPM1-228ENST00000560975 ENPP7Q6UWV6 458 aa15.02□□□□□ -0.01
TPM1-228ENST00000560975 ZNF676Q8N7Q3 588 aa15.02□□□□□ -0.01
TPM1-228ENST00000560975 CLEC1AQ8NC01 280 aa15.02□□□□□ -0.01
TPM1-228ENST00000560975 MYADMQ96S97 322 aa15.02□□□□□ -0.01
TPM1-228ENST00000560975 RSPH9Q9H1X1 276 aaPredicted RBP15.02□□□□□ -0.01
TPM1-228ENST00000560975 FAM96BQ9Y3D0 163 aa15.02□□□□□ -0.01
TPM1-228ENST00000560975 OR1A2Q9Y585 309 aa15.02□□□□□ -0.01
TPM1-228ENST00000560975 CD8AP01732 235 aa15.01□□□□□ -0.01
TPM1-228ENST00000560975 HLA-AP01891 365 aaKnown RBP15.01□□□□□ -0.01
TPM1-228ENST00000560975 PRNPP04156 253 aa15.01□□□□□ -0.01
TPM1-228ENST00000560975 GABRA3P34903 492 aa15.01□□□□□ -0.01
TPM1-228ENST00000560975 EMDP50402 254 aa15.01□□□□□ -0.01
TPM1-228ENST00000560975 DPTQ07507 201 aa15.01□□□□□ -0.01
TPM1-228ENST00000560975 PRAMEF17Q5VTA0 474 aa15.01□□□□□ -0.01
TPM1-228ENST00000560975 OTPQ5XKR4 325 aa15.01□□□□□ -0.01
TPM1-228ENST00000560975 ZNF627Q7L945 461 aa15.01□□□□□ -0.01
TPM1-228ENST00000560975 GSN-AS1Q9NRJ2 163 aa15.01□□□□□ -0.01
TPM1-228ENST00000560975 RXFP3Q9NSD7 469 aa15.01□□□□□ -0.01
TPM1-228ENST00000560975 UPB1Q9UBR1 384 aa15.01□□□□□ -0.01
TPM1-228ENST00000560975 MRM2Q9UI43 246 aaKnown RBP15.01□□□□□ -0.01
TPM1-228ENST00000560975 A0A1B0GTQ1 180 aa15.01□□□□□ -0.01
TPM1-228ENST00000560975 LDB3O75112 727 aa15.01□□□□□ -0.01
TPM1-228ENST00000560975 WNT11O96014 354 aa15.01□□□□□ -0.01
TPM1-228ENST00000560975 IFNA4P05014 189 aa15.01□□□□□ -0.01
TPM1-228ENST00000560975 NKPD1Q17RQ9 610 aa15.01□□□□□ -0.01
TPM1-228ENST00000560975 ATPAF1Q5TC12 328 aaPredicted RBP15.01□□□□□ -0.01
TPM1-228ENST00000560975 LEG1Q6P5S2 330 aa15.01□□□□□ -0.01
TPM1-228ENST00000560975 ZNF765Q7L2R6 523 aa15.01□□□□□ -0.01
TPM1-228ENST00000560975 FAM122BQ7Z309 247 aa15.01□□□□□ -0.01
TPM1-228ENST00000560975 OR1J4Q8NGS1 313 aa15.01□□□□□ -0.01
TPM1-228ENST00000560975 CCDC74AQ96AQ1 378 aa15.01□□□□□ -0.01
TPM1-228ENST00000560975 FBXO17Q96EF6 278 aa15.01□□□□□ -0.01
TPM1-228ENST00000560975 ZNF558Q96NG5 402 aa15.01□□□□□ -0.01
TPM1-228ENST00000560975 CNTNAP3BQ96NU0 1288 aa15.01□□□□□ -0.01
TPM1-228ENST00000560975 ALG12Q9BV10 488 aa15.01□□□□□ -0.01
TPM1-228ENST00000560975 NIT2Q9NQR4 276 aa15.01□□□□□ -0.01
TPM1-228ENST00000560975 CPED1A4D0V7 1026 aa15□□□□□ -0.01
TPM1-228ENST00000560975 TVP23AA6NH52 213 aa15□□□□□ -0.01
TPM1-228ENST00000560975 SNAPINO95295 136 aa15□□□□□ -0.01
TPM1-228ENST00000560975 ZNF28P17035 718 aa15□□□□□ -0.01
TPM1-228ENST00000560975 RPS4Y1P22090 263 aaKnown RBP15□□□□□ -0.01
TPM1-228ENST00000560975 SCN5AQ14524 2016 aa15□□□□□ -0.01
TPM1-228ENST00000560975 DEFB134Q4QY38 66 aa15□□□□□ -0.01
TPM1-228ENST00000560975 RHOUQ7L0Q8 258 aa15□□□□□ -0.01
TPM1-228ENST00000560975 TMPRSS9Q7Z410 1059 aa15□□□□□ -0.01
TPM1-228ENST00000560975 OR2L3Q8NG85 312 aa15□□□□□ -0.01
TPM1-228ENST00000560975 C1orf198Q9H425 327 aa15□□□□□ -0.01
TPM1-228ENST00000560975 ENTPD2Q9Y5L3 495 aa15□□□□□ -0.01
TPM1-228ENST00000560975 TICRRQ7Z2Z1 1910 aa15□□□□□ -0.01
TPM1-228ENST00000560975 SULT2B1O00204 365 aa15□□□□□ -0.01
TPM1-228ENST00000560975 DDX6P26196 483 aaKnown RBP eCLIP15□□□□□ -0.01
TPM1-228ENST00000560975 CDK3Q00526 305 aa15□□□□□ -0.01
TPM1-228ENST00000560975 RBM39Q14498 530 aaKnown RBP15□□□□□ -0.01
TPM1-228ENST00000560975 ZNF345Q14585 488 aa15□□□□□ -0.01
TPM1-228ENST00000560975 C2orf76Q3KRA6 126 aa15□□□□□ -0.01
TPM1-228ENST00000560975 SLC39A11Q8N1S5 342 aa15□□□□□ -0.01
TPM1-228ENST00000560975 ZSCAN1Q8NBB4 408 aa15□□□□□ -0.01
TPM1-228ENST00000560975 INO80EQ8NBZ0 244 aaPredicted RBP15□□□□□ -0.01
TPM1-228ENST00000560975 OR52E1Q8NGJ3 308 aa15□□□□□ -0.01
TPM1-228ENST00000560975 PHYHIPLQ96FC7 376 aa15□□□□□ -0.01
TPM1-228ENST00000560975 MBD2Q9UBB5 411 aa15□□□□□ -0.01
TPM1-228ENST00000560975 DOCK9Q9BZ29 2069 aa15□□□□□ -0.01
TPM1-228ENST00000560975 EEF1E1-BLOC1S5C9J1V9 151 aa14.99□□□□□ -0.01
TPM1-228ENST00000560975 UPK3AO75631 287 aa14.99□□□□□ -0.01
TPM1-228ENST00000560975 AQP2P41181 271 aa14.99□□□□□ -0.01
TPM1-228ENST00000560975 NR0B1P51843 470 aaKnown RBP14.99□□□□□ -0.01
TPM1-228ENST00000560975 DCDP81605 110 aaKnown RBP14.99□□□□□ -0.01
TPM1-228ENST00000560975 RPS4Y2Q8TD47 263 aa14.99□□□□□ -0.01
TPM1-228ENST00000560975 ZBTB8AQ96BR9 441 aa14.99□□□□□ -0.01
TPM1-228ENST00000560975 POTEKPQ9BYX7 375 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms