RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 ELK1P19419 428 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 CCR7P32248 378 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 ADRA1AP35348 466 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 SRP9P49458 86 aaKnown RBP6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 UBE2IP63279 158 aaKnown RBP6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 ADAM8P78325 824 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 ELAVL2Q12926 359 aaKnown RBP6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 PEA15Q15121 130 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 ZBTB6Q15916 424 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 RPE65Q16518 533 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 FAM174BQ3ZCQ3 159 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 LYPD4Q6UWN0 246 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 LCLAT1Q6UWP7 414 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 CASP12Q6UXS9 341 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 ZAR1Q86SH2 424 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 TBC1D26Q86UD7 250 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 TAC4Q86UU9 113 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 UNC93AQ86WB7 457 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 STHQ8IWL8 128 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 TMEM217Q8N7C4 229 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 BCORP1Q8N888 145 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 RELL2Q8NC24 303 aaPredicted RBP6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 OR10G2Q8NGC3 310 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 GRHL3Q8TE85 626 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 XAGE5Q8WWM1 108 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 ATOH8Q96SQ7 321 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 ALG12Q9BV10 488 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 HINT2Q9BX68 163 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 SLC38A1Q9H2H9 487 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 RERGLQ9H628 205 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 RASL12Q9NYN1 266 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 ZNF225Q9UK10 706 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 UBQLN1Q9UMX0 589 aaKnown RBP6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 IRAK3Q9Y616 596 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 TRIP12Q14669 1992 aaPredicted RBP6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 OR2M5A3KFT3 312 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 PRSS46E5RG02 174 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 RFXAPO00287 272 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 VCYO14598 125 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 ARPC5O15511 151 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 EEF1E1O43324 174 aaKnown RBP6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 PPIHO43447 177 aaKnown RBP6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 OR2A4O95047 310 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 ZFPL1O95159 310 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 HIST1H2ABP04908 130 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 OR8U8P0C7N1 319 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 ZNF10P21506 573 aaPredicted RBP6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 HOXD9P28356 352 aaPredicted RBP6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 MTCP1P56278 107 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 RPS25P62851 125 aaKnown RBP6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 SKP1P63208 163 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 MAD2L1Q13257 205 aaPredicted RBP6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 TBR1Q16650 682 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 TTLL9Q3SXZ7 439 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 THEM4Q5T1C6 240 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 TMIGD1Q6UXZ0 262 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 CBLL1Q75N03 491 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 HIST3H2AQ7L7L0 130 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 KLHDC8BQ8IXV7 354 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 SELENOHQ8IZQ5 122 aaKnown RBP6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 ZNF561Q8N587 486 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 LRRC52Q8N7C0 313 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 OR6K3Q8NGY3 331 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 HIST1H2ACQ93077 130 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 CTHRC1Q96CG8 243 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 C7orf34Q96L11 122 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 OR2A7Q96R45 310 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 OR4K3Q96R72 315 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 MFFQ9GZY8 342 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 ISYNA1Q9NPH2 558 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 DUSP22Q9NRW4 184 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 CYSLTR2Q9NS75 346 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 NEU3Q9UQ49 428 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 POLR3HQ9Y535 204 aaPredicted RBP6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 SNX11Q9Y5W9 270 aa6.11□□□□□ -1.43
TSPAN3-209ENST00000560715 FAM90A10PA6NDY2 464 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 RFPL4AA6NLU0 287 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 GABRR3A8MPY1 467 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 F5H697 171 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 RFPL4AL1F8VTS6 287 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 XRCC3O43542 346 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 ENTPD6O75354 484 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 SOD1P00441 154 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 STAG3L2P0CL84 134 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 NR2C1P13056 603 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 CD22P20273 847 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 RBMS1P29558 406 aaKnown RBP6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 PDHA2P29803 388 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 CDKN2CP42773 168 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 RFX3P48380 749 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 PPT1P50897 306 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 CCR6P51684 374 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 PTGES3Q15185 160 aaKnown RBP6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 C2orf68Q2NKX9 166 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 AKIRIN2Q53H80 203 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 ZNF311Q5JNZ3 666 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 CST9Q5W186 159 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 Q6ZTK2 550 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 C22orf34Q6ZV56 151 aa6.1□□□□□ -1.43
TSPAN3-209ENST00000560715 PIM3Q86V86 326 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms