RNA–Protein interactions for RNA: ENST00000560297.5

USP8-209, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-209ENST00000560297 LNX2Q8N448 690 aa10.84□□□□□ -0.67
USP8-209ENST00000560297 CBR4Q8N4T8 237 aa10.84□□□□□ -0.67
USP8-209ENST00000560297 OR6N1Q8NGY5 312 aa10.84□□□□□ -0.67
USP8-209ENST00000560297 ZNF519Q8TB69 540 aa10.84□□□□□ -0.67
USP8-209ENST00000560297 MAGEE2Q8TD90 523 aaPredicted RBP10.84□□□□□ -0.67
USP8-209ENST00000560297 Q96M85 177 aa10.84□□□□□ -0.67
USP8-209ENST00000560297 ZNF570Q96NI8 536 aa10.84□□□□□ -0.67
USP8-209ENST00000560297 RBP7Q96R05 134 aa10.84□□□□□ -0.67
USP8-209ENST00000560297 RBM24Q9BX46 236 aaKnown RBP10.84□□□□□ -0.67
USP8-209ENST00000560297 MRPL13Q9BYD1 178 aaKnown RBP10.84□□□□□ -0.67
USP8-209ENST00000560297 SLC7A10Q9NS82 523 aa10.84□□□□□ -0.67
USP8-209ENST00000560297 MALT1Q9UDY8 824 aa10.84□□□□□ -0.67
USP8-209ENST00000560297 TMEFF2Q9UIK5 374 aaPredicted RBP10.84□□□□□ -0.67
USP8-209ENST00000560297 ADAM18Q9Y3Q7 739 aa10.84□□□□□ -0.67
USP8-209ENST00000560297 MED12LQ86YW9 2145 aa10.84□□□□□ -0.67
USP8-209ENST00000560297 DOCK7Q96N67 2140 aa10.84□□□□□ -0.67
USP8-209ENST00000560297 ARHGAP21Q5T5U3 1957 aa10.83□□□□□ -0.68
USP8-209ENST00000560297 KIAA1549Q9HCM3 1950 aa10.83□□□□□ -0.68
USP8-209ENST00000560297 DIDO1Q9BTC0 2240 aaKnown RBP10.83□□□□□ -0.68
USP8-209ENST00000560297 FAM90A27PA6NNH2 459 aa10.83□□□□□ -0.68
USP8-209ENST00000560297 ZNF587BE7ETH6 402 aa10.83□□□□□ -0.68
USP8-209ENST00000560297 RPL36A-HNRNPH2H7BZ11 118 aa10.83□□□□□ -0.68
USP8-209ENST00000560297 SOCS2O14508 198 aa10.83□□□□□ -0.68
USP8-209ENST00000560297 EI24O14681 340 aa10.83□□□□□ -0.68
USP8-209ENST00000560297 CASQ2O14958 399 aaPredicted RBP10.83□□□□□ -0.68
USP8-209ENST00000560297 PPP1R3DO95685 299 aa10.83□□□□□ -0.68
USP8-209ENST00000560297 HMGN1P05114 100 aa10.83□□□□□ -0.68
USP8-209ENST00000560297 PGA4P0DJD7 388 aa10.83□□□□□ -0.68
USP8-209ENST00000560297 PGA3P0DJD8 388 aa10.83□□□□□ -0.68
USP8-209ENST00000560297 CSNK1A1P48729 337 aa10.83□□□□□ -0.68
USP8-209ENST00000560297 CLRN1P58418 232 aa10.83□□□□□ -0.68
USP8-209ENST00000560297 CDK5Q00535 292 aa10.83□□□□□ -0.68
USP8-209ENST00000560297 MYBPC1Q00872 1141 aa10.83□□□□□ -0.68
USP8-209ENST00000560297 TGFBR3Q03167 851 aa10.83□□□□□ -0.68
USP8-209ENST00000560297 FAPQ12884 760 aa10.83□□□□□ -0.68
USP8-209ENST00000560297 ITGADQ13349 1161 aa10.83□□□□□ -0.68
USP8-209ENST00000560297 TRIP10Q15642 601 aa10.83□□□□□ -0.68
USP8-209ENST00000560297 STK11Q15831 433 aa10.83□□□□□ -0.68
USP8-209ENST00000560297 HIST3H3Q16695 136 aa10.83□□□□□ -0.68
USP8-209ENST00000560297 THEM4Q5T1C6 240 aa10.83□□□□□ -0.68
USP8-209ENST00000560297 CARD17Q5XLA6 110 aa10.83□□□□□ -0.68
USP8-209ENST00000560297 ANKRD34AQ69YU3 496 aa10.83□□□□□ -0.68
USP8-209ENST00000560297 GABRG1Q8N1C3 465 aa10.83□□□□□ -0.68
USP8-209ENST00000560297 PACRGLQ8N7B6 248 aa10.83□□□□□ -0.68
USP8-209ENST00000560297 RNASE6Q93091 150 aaKnown RBP10.83□□□□□ -0.68
USP8-209ENST00000560297 TMEM54Q969K7 222 aa10.83□□□□□ -0.68
USP8-209ENST00000560297 TSPAN32Q96QS1 320 aa10.83□□□□□ -0.68
USP8-209ENST00000560297 KCNK17Q96T54 332 aa10.83□□□□□ -0.68
USP8-209ENST00000560297 USB1Q9BQ65 265 aaKnown RBP10.83□□□□□ -0.68
USP8-209ENST00000560297 ALG12Q9BV10 488 aa10.83□□□□□ -0.68
USP8-209ENST00000560297 PLA2G12AQ9BZM1 189 aa10.83□□□□□ -0.68
USP8-209ENST00000560297 GLTPQ9NZD2 209 aa10.83□□□□□ -0.68
USP8-209ENST00000560297 PRSS50Q9UI38 385 aa10.83□□□□□ -0.68
USP8-209ENST00000560297 PCNX1Q96RV3 2341 aa10.83□□□□□ -0.68
USP8-209ENST00000560297 TEX13CA0A0J9YWL9 993 aa10.82□□□□□ -0.68
USP8-209ENST00000560297 PRSS37A4D1T9 235 aa10.82□□□□□ -0.68
USP8-209ENST00000560297 M0R3G1 203 aa10.82□□□□□ -0.68
USP8-209ENST00000560297 ARHGEF9O43307 516 aa10.82□□□□□ -0.68
USP8-209ENST00000560297 UPK3AO75631 287 aa10.82□□□□□ -0.68
USP8-209ENST00000560297 IGHV3-9P01782 118 aa10.82□□□□□ -0.68
USP8-209ENST00000560297 IGFBP1P08833 259 aaPredicted RBP10.82□□□□□ -0.68
USP8-209ENST00000560297 PSMB1P20618 241 aaKnown RBP10.82□□□□□ -0.68
USP8-209ENST00000560297 EDNRAP25101 427 aa10.82□□□□□ -0.68
USP8-209ENST00000560297 MPGP29372 298 aa10.82□□□□□ -0.68
USP8-209ENST00000560297 CD79BP40259 229 aa10.82□□□□□ -0.68
USP8-209ENST00000560297 PEX19P40855 299 aa10.82□□□□□ -0.68
USP8-209ENST00000560297 RUNX1T1Q06455 604 aa10.82□□□□□ -0.68
USP8-209ENST00000560297 NPRL3Q12980 569 aa10.82□□□□□ -0.68
USP8-209ENST00000560297 KRR1Q13601 381 aaKnown RBP10.82□□□□□ -0.68
USP8-209ENST00000560297 GINS1Q14691 196 aa10.82□□□□□ -0.68
USP8-209ENST00000560297 PTGES3Q15185 160 aaKnown RBP10.82□□□□□ -0.68
USP8-209ENST00000560297 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.82□□□□□ -0.68
USP8-209ENST00000560297 JAZF1Q86VZ6 243 aa10.82□□□□□ -0.68
USP8-209ENST00000560297 SYT14Q8NB59 555 aa10.82□□□□□ -0.68
USP8-209ENST00000560297 NOXO1Q8NFA2 376 aa10.82□□□□□ -0.68
USP8-209ENST00000560297 OR8D4Q8NGM9 314 aa10.82□□□□□ -0.68
USP8-209ENST00000560297 HDAC2Q92769 488 aaKnown RBP10.82□□□□□ -0.68
USP8-209ENST00000560297 SNX18Q96RF0 628 aa10.82□□□□□ -0.68
USP8-209ENST00000560297 SLC29A1Q99808 456 aa10.82□□□□□ -0.68
USP8-209ENST00000560297 ULBP2Q9BZM5 246 aa10.82□□□□□ -0.68
USP8-209ENST00000560297 TAS2R16Q9NYV7 291 aa10.82□□□□□ -0.68
USP8-209ENST00000560297 NKX1-2Q9UD57 310 aaPredicted RBP10.82□□□□□ -0.68
USP8-209ENST00000560297 KLHL21Q9UJP4 597 aa10.82□□□□□ -0.68
USP8-209ENST00000560297 GPR52Q9Y2T5 361 aa10.82□□□□□ -0.68
USP8-209ENST00000560297 KLF2Q9Y5W3 355 aaPredicted RBP10.82□□□□□ -0.68
USP8-209ENST00000560297 MYO18BQ8IUG5 2567 aa10.82□□□□□ -0.68
USP8-209ENST00000560297 SLC22A23A1A5C7 686 aa10.81□□□□□ -0.68
USP8-209ENST00000560297 NKX2-6A6NCS4 301 aa10.81□□□□□ -0.68
USP8-209ENST00000560297 C16orf97H3BN30 126 aa10.81□□□□□ -0.68
USP8-209ENST00000560297 MITFO75030 526 aaPredicted RBP10.81□□□□□ -0.68
USP8-209ENST00000560297 RENP00797 406 aa10.81□□□□□ -0.68
USP8-209ENST00000560297 IFNGP01579 166 aa10.81□□□□□ -0.68
USP8-209ENST00000560297 QDPRP09417 244 aa10.81□□□□□ -0.68
USP8-209ENST00000560297 HIST1H1CP16403 213 aaKnown RBP10.81□□□□□ -0.68
USP8-209ENST00000560297 GRK5P34947 590 aa10.81□□□□□ -0.68
USP8-209ENST00000560297 CDKN2AP42771 156 aaKnown RBP10.81□□□□□ -0.68
USP8-209ENST00000560297 ZNF133P52736 654 aaPredicted RBP10.81□□□□□ -0.68
USP8-209ENST00000560297 SH3BGRP55822 239 aaPredicted RBP10.81□□□□□ -0.68
USP8-209ENST00000560297 ROR2Q01974 943 aaKnown RBP10.81□□□□□ -0.68
USP8-209ENST00000560297 CD47Q08722 323 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms