RNA–Protein interactions for RNA: ENST00000560208.1

CRNDE-209, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-209ENST00000560208 MS4A18Q3C1V0 323 aa20.29■□□□□ 0.84
CRNDE-209ENST00000560208 MTX3Q5HYI7 312 aa20.29■□□□□ 0.84
CRNDE-209ENST00000560208 FGD3Q5JSP0 725 aa20.29■□□□□ 0.84
CRNDE-209ENST00000560208 ZNF730Q6ZMV8 503 aa20.29■□□□□ 0.84
CRNDE-209ENST00000560208 SLC46A3Q7Z3Q1 461 aa20.29■□□□□ 0.84
CRNDE-209ENST00000560208 MEX3DQ86XN8 651 aaKnown RBP20.29■□□□□ 0.84
CRNDE-209ENST00000560208 UEVLDQ8IX04 471 aa20.29■□□□□ 0.84
CRNDE-209ENST00000560208 MUC15Q8N387 334 aa20.29■□□□□ 0.84
CRNDE-209ENST00000560208 ADPRHL1Q8NDY3 354 aa20.29■□□□□ 0.84
CRNDE-209ENST00000560208 PIK3C3Q8NEB9 887 aa20.29■□□□□ 0.84
CRNDE-209ENST00000560208 ALKBH3Q96Q83 286 aaPredicted RBP20.29■□□□□ 0.84
CRNDE-209ENST00000560208 REG4Q9BYZ8 158 aa20.29■□□□□ 0.84
CRNDE-209ENST00000560208 ZNF229Q9UJW7 825 aa20.29■□□□□ 0.84
CRNDE-209ENST00000560208 ATP23Q9Y6H3 246 aa20.29■□□□□ 0.84
CRNDE-209ENST00000560208 TCRBV5S2A0A599 114 aa20.28■□□□□ 0.84
CRNDE-209ENST00000560208 PLPP3O14495 311 aa20.28■□□□□ 0.84
CRNDE-209ENST00000560208 ATP5HO75947 161 aa20.28■□□□□ 0.84
CRNDE-209ENST00000560208 OR7A10O76100 309 aa20.28■□□□□ 0.84
CRNDE-209ENST00000560208 HLA-DOBP13765 273 aa20.28■□□□□ 0.84
CRNDE-209ENST00000560208 FUT1P19526 365 aa20.28■□□□□ 0.84
CRNDE-209ENST00000560208 RASSF2P50749 326 aa20.28■□□□□ 0.84
CRNDE-209ENST00000560208 SPIBQ01892 262 aa20.28■□□□□ 0.84
CRNDE-209ENST00000560208 PUDPQ08623 228 aa20.28■□□□□ 0.84
CRNDE-209ENST00000560208 C11orf71Q6IPW1 123 aa20.28■□□□□ 0.84
CRNDE-209ENST00000560208 TBPL2Q6SJ96 375 aa20.28■□□□□ 0.84
CRNDE-209ENST00000560208 LINGO2Q7L985 606 aa20.28■□□□□ 0.84
CRNDE-209ENST00000560208 NANOGNBQ7Z5D8 188 aa20.28■□□□□ 0.84
CRNDE-209ENST00000560208 ZDHHC21Q8IVQ6 265 aa20.28■□□□□ 0.84
CRNDE-209ENST00000560208 NRMQ8IXM6 262 aa20.28■□□□□ 0.84
CRNDE-209ENST00000560208 MAPK1IP1LQ8NDC0 245 aa20.28■□□□□ 0.84
CRNDE-209ENST00000560208 OR1K1Q8NGR3 316 aa20.28■□□□□ 0.84
CRNDE-209ENST00000560208 OR52J3Q8NH60 311 aa20.28■□□□□ 0.84
CRNDE-209ENST00000560208 ADAD1Q96M93 576 aaKnown RBP20.28■□□□□ 0.84
CRNDE-209ENST00000560208 CACNG6Q9BXT2 260 aa20.28■□□□□ 0.84
CRNDE-209ENST00000560208 CADM1Q9BY67 442 aaKnown RBP20.28■□□□□ 0.84
CRNDE-209ENST00000560208 TRIM15Q9C019 465 aa20.28■□□□□ 0.84
CRNDE-209ENST00000560208 GSC2O15499 205 aa20.27■□□□□ 0.84
CRNDE-209ENST00000560208 UPK3AO75631 287 aa20.27■□□□□ 0.84
CRNDE-209ENST00000560208 POU3F1Q03052 451 aaPredicted RBP20.27■□□□□ 0.84
CRNDE-209ENST00000560208 TBRG1Q3YBR2 411 aa20.27■□□□□ 0.84
CRNDE-209ENST00000560208 ZNF544Q6NX49 715 aa20.27■□□□□ 0.84
CRNDE-209ENST00000560208 DNM1P46Q6ZS02 220 aa20.27■□□□□ 0.84
CRNDE-209ENST00000560208 RRM2BQ7LG56 351 aa20.27■□□□□ 0.84
CRNDE-209ENST00000560208 ACOT11Q8WXI4 607 aaPredicted RBP20.27■□□□□ 0.84
CRNDE-209ENST00000560208 LINC00470Q9BZP3 86 aa20.27■□□□□ 0.84
CRNDE-209ENST00000560208 OBP2BQ9NPH6 170 aa20.27■□□□□ 0.84
CRNDE-209ENST00000560208 ARFGEF3Q5TH69 2177 aa20.27■□□□□ 0.83
CRNDE-209ENST00000560208 SONP18583 2426 aaKnown RBP20.26■□□□□ 0.83
CRNDE-209ENST00000560208 A0A087WUU8 490 aa20.26■□□□□ 0.83
CRNDE-209ENST00000560208 BLOC1S5-TXNDC5H3BN57 136 aa20.26■□□□□ 0.83
CRNDE-209ENST00000560208 ACOT8O14734 319 aa20.26■□□□□ 0.83
CRNDE-209ENST00000560208 SSX4O60224 188 aa20.26■□□□□ 0.83
CRNDE-209ENST00000560208 PPP2R2BQ00005 443 aa20.26■□□□□ 0.83
CRNDE-209ENST00000560208 TRAP1Q12931 704 aaKnown RBP20.26■□□□□ 0.83
CRNDE-209ENST00000560208 IQCCQ4KMZ1 466 aa20.26■□□□□ 0.83
CRNDE-209ENST00000560208 HMBOX1Q6NT76 420 aa20.26■□□□□ 0.83
CRNDE-209ENST00000560208 PGM2L1Q6PCE3 622 aa20.26■□□□□ 0.83
CRNDE-209ENST00000560208 PODNL1Q6PEZ8 512 aa20.26■□□□□ 0.83
CRNDE-209ENST00000560208 BCL2L2Q92843 193 aaPredicted RBP20.26■□□□□ 0.83
CRNDE-209ENST00000560208 BPIFA2Q96DR5 249 aa20.26■□□□□ 0.83
CRNDE-209ENST00000560208 MOKQ9UQ07 419 aa20.26■□□□□ 0.83
CRNDE-209ENST00000560208 RCE1Q9Y256 329 aa20.26■□□□□ 0.83
CRNDE-209ENST00000560208 TRBV4-1A0A0J9YWV2 114 aa20.25■□□□□ 0.83
CRNDE-209ENST00000560208 INAFM1C9JVW0 142 aa20.25■□□□□ 0.83
CRNDE-209ENST00000560208 ATP6V1G2-DDX39BF2Z307 99 aa20.25■□□□□ 0.83
CRNDE-209ENST00000560208 RNF13O43567 381 aa20.25■□□□□ 0.83
CRNDE-209ENST00000560208 TRAF3IP2O43734 574 aaPredicted RBP20.25■□□□□ 0.83
CRNDE-209ENST00000560208 ZNF432O94892 652 aa20.25■□□□□ 0.83
CRNDE-209ENST00000560208 ASAH2BP0C7U1 165 aa20.25■□□□□ 0.83
CRNDE-209ENST00000560208 UBE2NP61088 152 aaKnown RBP20.25■□□□□ 0.83
CRNDE-209ENST00000560208 ROR2Q01974 943 aaKnown RBP20.25■□□□□ 0.83
CRNDE-209ENST00000560208 CARD17Q5XLA6 110 aa20.25■□□□□ 0.83
CRNDE-209ENST00000560208 TXNDC15Q96J42 360 aa20.25■□□□□ 0.83
CRNDE-209ENST00000560208 EMC6Q9BV81 110 aa20.25■□□□□ 0.83
CRNDE-209ENST00000560208 ANKRD19PQ9H560 264 aa20.25■□□□□ 0.83
CRNDE-209ENST00000560208 IL1RAPQ9NPH3 570 aa20.25■□□□□ 0.83
CRNDE-209ENST00000560208 MED29Q9NX70 200 aa20.25■□□□□ 0.83
CRNDE-209ENST00000560208 TAS2R5Q9NYW4 299 aa20.25■□□□□ 0.83
CRNDE-209ENST00000560208 A0A1W2PRQ8 180 aa20.24■□□□□ 0.83
CRNDE-209ENST00000560208 SLC43A1O75387 559 aa20.24■□□□□ 0.83
CRNDE-209ENST00000560208 GADD45GO95257 159 aa20.24■□□□□ 0.83
CRNDE-209ENST00000560208 SAGP10523 405 aaPredicted RBP20.24■□□□□ 0.83
CRNDE-209ENST00000560208 MAKP20794 623 aa20.24■□□□□ 0.83
CRNDE-209ENST00000560208 RRM2P31350 389 aa20.24■□□□□ 0.83
CRNDE-209ENST00000560208 APOBEC3AP31941 199 aaPredicted RBP20.24■□□□□ 0.83
CRNDE-209ENST00000560208 GPR4P46093 362 aa20.24■□□□□ 0.83
CRNDE-209ENST00000560208 ERFP50548 548 aa20.24■□□□□ 0.83
CRNDE-209ENST00000560208 CHRNB3Q05901 458 aa20.24■□□□□ 0.83
CRNDE-209ENST00000560208 KRTAP1-1Q07627 177 aa20.24■□□□□ 0.83
CRNDE-209ENST00000560208 DGCR6Q14129 220 aa20.24■□□□□ 0.83
CRNDE-209ENST00000560208 FLOT2Q14254 428 aa20.24■□□□□ 0.83
CRNDE-209ENST00000560208 ANKRD16Q6P6B7 361 aa20.24■□□□□ 0.83
CRNDE-209ENST00000560208 CCDC121Q6ZUS5 278 aa20.24■□□□□ 0.83
CRNDE-209ENST00000560208 MBOAT2Q6ZWT7 520 aa20.24■□□□□ 0.83
CRNDE-209ENST00000560208 SPATA24Q86W54 205 aa20.24■□□□□ 0.83
CRNDE-209ENST00000560208 SLC7A13Q8TCU3 470 aa20.24■□□□□ 0.83
CRNDE-209ENST00000560208 MAGEE2Q8TD90 523 aaPredicted RBP20.24■□□□□ 0.83
CRNDE-209ENST00000560208 ZNF347Q96SE7 839 aa20.24■□□□□ 0.83
CRNDE-209ENST00000560208 AURKCQ9UQB9 309 aa20.24■□□□□ 0.83
CRNDE-209ENST00000560208 NOX1Q9Y5S8 564 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms