RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 GTF3AQ92664 365 aaKnown RBP16.77■□□□□ 0.28
RABGGTA-214ENST00000560163 TAF15Q92804 592 aaKnown RBP eCLIP16.77■□□□□ 0.28
RABGGTA-214ENST00000560163 RAB1CQ92928 201 aa16.77■□□□□ 0.28
RABGGTA-214ENST00000560163 POP5Q969H6 163 aaKnown RBP16.77■□□□□ 0.28
RABGGTA-214ENST00000560163 SLC38A4Q969I6 547 aa16.77■□□□□ 0.28
RABGGTA-214ENST00000560163 OR52E6Q96RD3 313 aa16.77■□□□□ 0.28
RABGGTA-214ENST00000560163 GPA33Q99795 319 aa16.77■□□□□ 0.28
RABGGTA-214ENST00000560163 C20orf27Q9GZN8 174 aa16.77■□□□□ 0.28
RABGGTA-214ENST00000560163 SLCO1C1Q9NYB5 712 aa16.77■□□□□ 0.28
RABGGTA-214ENST00000560163 KLHL14Q9P2G3 628 aa16.77■□□□□ 0.28
RABGGTA-214ENST00000560163 LEF1Q9UJU2 399 aaPredicted RBP16.77■□□□□ 0.28
RABGGTA-214ENST00000560163 NUP50Q9UKX7 468 aa16.77■□□□□ 0.28
RABGGTA-214ENST00000560163 A0A087WUJ7 227 aa16.76■□□□□ 0.27
RABGGTA-214ENST00000560163 A0A0G2JPF8 293 aa16.76■□□□□ 0.27
RABGGTA-214ENST00000560163 HNRNPCL2B2RXH8 293 aa16.76■□□□□ 0.27
RABGGTA-214ENST00000560163 HNRNPCL3B7ZW38 293 aa16.76■□□□□ 0.27
RABGGTA-214ENST00000560163 CLDN34H7C241 214 aa16.76■□□□□ 0.27
RABGGTA-214ENST00000560163 HNRNPCL1O60812 293 aaKnown RBP16.76■□□□□ 0.27
RABGGTA-214ENST00000560163 KRT75O95678 551 aa16.76■□□□□ 0.27
RABGGTA-214ENST00000560163 HNRNPCL4P0DMR1 293 aa16.76■□□□□ 0.27
RABGGTA-214ENST00000560163 CBLP22681 906 aa16.76■□□□□ 0.27
RABGGTA-214ENST00000560163 LSP1P33241 339 aa16.76■□□□□ 0.27
RABGGTA-214ENST00000560163 ETV4P43268 484 aa16.76■□□□□ 0.27
RABGGTA-214ENST00000560163 ERVS71-1P61550 626 aa16.76■□□□□ 0.27
RABGGTA-214ENST00000560163 LRRC74AQ0VAA2 488 aa16.76■□□□□ 0.27
RABGGTA-214ENST00000560163 CAMK2DQ13557 499 aa16.76■□□□□ 0.27
RABGGTA-214ENST00000560163 HFEQ30201 348 aa16.76■□□□□ 0.27
RABGGTA-214ENST00000560163 SNX32Q86XE0 403 aa16.76■□□□□ 0.27
RABGGTA-214ENST00000560163 TREML1Q86YW5 311 aa16.76■□□□□ 0.27
RABGGTA-214ENST00000560163 LSMEM1Q8N8F7 131 aa16.76■□□□□ 0.27
RABGGTA-214ENST00000560163 OR6S1Q8NH40 331 aa16.76■□□□□ 0.27
RABGGTA-214ENST00000560163 ZNF519Q8TB69 540 aa16.76■□□□□ 0.27
RABGGTA-214ENST00000560163 ULBP2Q9BZM5 246 aa16.76■□□□□ 0.27
RABGGTA-214ENST00000560163 ARMC7Q9H6L4 198 aa16.76■□□□□ 0.27
RABGGTA-214ENST00000560163 PLEK2Q9NYT0 353 aa16.76■□□□□ 0.27
RABGGTA-214ENST00000560163 IFT52Q9Y366 437 aa16.76■□□□□ 0.27
RABGGTA-214ENST00000560163 ALDOCP09972 364 aaKnown RBP16.75■□□□□ 0.27
RABGGTA-214ENST00000560163 LBPP18428 481 aa16.75■□□□□ 0.27
RABGGTA-214ENST00000560163 NME5P56597 212 aa16.75■□□□□ 0.27
RABGGTA-214ENST00000560163 BAMBIQ13145 260 aa16.75■□□□□ 0.27
RABGGTA-214ENST00000560163 OGFOD2Q6N063 350 aa16.75■□□□□ 0.27
RABGGTA-214ENST00000560163 WDR88Q6ZMY6 472 aa16.75■□□□□ 0.27
RABGGTA-214ENST00000560163 MREGQ8N565 214 aa16.75■□□□□ 0.27
RABGGTA-214ENST00000560163 SLC30A7Q8NEW0 376 aa16.75■□□□□ 0.27
RABGGTA-214ENST00000560163 SNX33Q8WV41 574 aa16.75■□□□□ 0.27
RABGGTA-214ENST00000560163 TIMD4Q96H15 378 aa16.75■□□□□ 0.27
RABGGTA-214ENST00000560163 TMEM19Q96HH6 336 aa16.75■□□□□ 0.27
RABGGTA-214ENST00000560163 TCF7L2Q9NQB0 619 aa16.75■□□□□ 0.27
RABGGTA-214ENST00000560163 MMP26Q9NRE1 261 aa16.75■□□□□ 0.27
RABGGTA-214ENST00000560163 DECR2Q9NUI1 292 aa16.75■□□□□ 0.27
RABGGTA-214ENST00000560163 TLDC2A0PJX2 215 aa16.74■□□□□ 0.27
RABGGTA-214ENST00000560163 SNAP29O95721 258 aa16.74■□□□□ 0.27
RABGGTA-214ENST00000560163 BGLAPP02818 100 aa16.74■□□□□ 0.27
RABGGTA-214ENST00000560163 MYZAPP0CAP1 466 aa16.74■□□□□ 0.27
RABGGTA-214ENST00000560163 CCL2P13500 99 aa16.74■□□□□ 0.27
RABGGTA-214ENST00000560163 HTR2AP28223 471 aa16.74■□□□□ 0.27
RABGGTA-214ENST00000560163 GCH1P30793 250 aa16.74■□□□□ 0.27
RABGGTA-214ENST00000560163 BEND6Q5SZJ8 279 aaPredicted RBP16.74■□□□□ 0.27
RABGGTA-214ENST00000560163 SLC22A24Q8N4F4 322 aa16.74■□□□□ 0.27
RABGGTA-214ENST00000560163 SCAIQ8N9R8 606 aa16.74■□□□□ 0.27
RABGGTA-214ENST00000560163 OR6N1Q8NGY5 312 aa16.74■□□□□ 0.27
RABGGTA-214ENST00000560163 C11orf40Q8WZ69 217 aa16.74■□□□□ 0.27
RABGGTA-214ENST00000560163 GAL3ST1Q99999 423 aa16.74■□□□□ 0.27
RABGGTA-214ENST00000560163 SAP30LQ9HAJ7 183 aa16.74■□□□□ 0.27
RABGGTA-214ENST00000560163 POLR3KQ9Y2Y1 108 aaPredicted RBP16.74■□□□□ 0.27
RABGGTA-214ENST00000560163 A0A1B0GWA3 101 aa16.73■□□□□ 0.27
RABGGTA-214ENST00000560163 UBOX5O94941 541 aa16.73■□□□□ 0.27
RABGGTA-214ENST00000560163 IGHV3-13P01766 116 aa16.73■□□□□ 0.27
RABGGTA-214ENST00000560163 NQO1P15559 274 aaKnown RBP16.73■□□□□ 0.27
RABGGTA-214ENST00000560163 MAKP20794 623 aa16.73■□□□□ 0.27
RABGGTA-214ENST00000560163 MDKP21741 143 aaPredicted RBP16.73■□□□□ 0.27
RABGGTA-214ENST00000560163 CRATP43155 626 aa16.73■□□□□ 0.27
RABGGTA-214ENST00000560163 ATP4BP51164 291 aa16.73■□□□□ 0.27
RABGGTA-214ENST00000560163 UCP2P55851 309 aa16.73■□□□□ 0.27
RABGGTA-214ENST00000560163 DSTNP60981 165 aa16.73■□□□□ 0.27
RABGGTA-214ENST00000560163 RBBP4Q09028 425 aa16.73■□□□□ 0.27
RABGGTA-214ENST00000560163 SLC9A3R2Q15599 337 aa16.73■□□□□ 0.27
RABGGTA-214ENST00000560163 TSTQ16762 297 aaKnown RBP16.73■□□□□ 0.27
RABGGTA-214ENST00000560163 PXKQ7Z7A4 578 aa16.73■□□□□ 0.27
RABGGTA-214ENST00000560163 TMEM54Q969K7 222 aa16.73■□□□□ 0.27
RABGGTA-214ENST00000560163 SLC25A28Q96A46 364 aa16.73■□□□□ 0.27
RABGGTA-214ENST00000560163 SORT1Q99523 831 aa16.73■□□□□ 0.27
RABGGTA-214ENST00000560163 OR51B6Q9H340 312 aa16.73■□□□□ 0.27
RABGGTA-214ENST00000560163 BCL2L10Q9HD36 194 aa16.73■□□□□ 0.27
RABGGTA-214ENST00000560163 AIG1Q9NVV5 245 aa16.73■□□□□ 0.27
RABGGTA-214ENST00000560163 PURGQ9UJV8 347 aaKnown RBP16.73■□□□□ 0.27
RABGGTA-214ENST00000560163 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.73■□□□□ 0.27
RABGGTA-214ENST00000560163 ZNF281Q9Y2X9 895 aa16.73■□□□□ 0.27
RABGGTA-214ENST00000560163 RAP2CQ9Y3L5 183 aa16.73■□□□□ 0.27
RABGGTA-214ENST00000560163 MMP24Q9Y5R2 645 aa16.73■□□□□ 0.27
RABGGTA-214ENST00000560163 WNK1Q9H4A3 2382 aa16.72■□□□□ 0.27
RABGGTA-214ENST00000560163 ZNF726A6NNF4 738 aa16.72■□□□□ 0.27
RABGGTA-214ENST00000560163 TRAPPC2LH3BP13 241 aa16.72■□□□□ 0.27
RABGGTA-214ENST00000560163 RFXANKO14593 260 aa16.72■□□□□ 0.27
RABGGTA-214ENST00000560163 TYROBPO43914 113 aa16.72■□□□□ 0.27
RABGGTA-214ENST00000560163 MFN2O95140 757 aa16.72■□□□□ 0.27
RABGGTA-214ENST00000560163 LCKP06239 509 aa16.72■□□□□ 0.27
RABGGTA-214ENST00000560163 OR8G3PP0DMU2 310 aa16.72■□□□□ 0.27
RABGGTA-214ENST00000560163 RPL14P50914 215 aaKnown RBP16.72■□□□□ 0.27
RABGGTA-214ENST00000560163 ABCE1P61221 599 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms