RNA–Protein interactions for RNA: ENST00000559551.5

RABGGTA-209, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-209ENST00000559551 LINC01590Q5TEZ4 76 aa12.77□□□□□ -0.36
RABGGTA-209ENST00000559551 STX19Q8N4C7 294 aa12.77□□□□□ -0.36
RABGGTA-209ENST00000559551 TMEM178AQ8NBL3 297 aa12.77□□□□□ -0.36
RABGGTA-209ENST00000559551 SMAP2Q8WU79 429 aaPredicted RBP12.77□□□□□ -0.36
RABGGTA-209ENST00000559551 ASB10Q8WXI3 467 aa12.77□□□□□ -0.36
RABGGTA-209ENST00000559551 SLX1AQ9BQ83 275 aa12.77□□□□□ -0.36
RABGGTA-209ENST00000559551 CDCA4Q9BXL8 241 aa12.77□□□□□ -0.36
RABGGTA-209ENST00000559551 FGF20Q9NP95 211 aaPredicted RBP12.77□□□□□ -0.36
RABGGTA-209ENST00000559551 GRHPRQ9UBQ7 328 aa12.77□□□□□ -0.36
RABGGTA-209ENST00000559551 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.77□□□□□ -0.36
RABGGTA-209ENST00000559551 EXOGQ9Y2C4 368 aaKnown RBP12.77□□□□□ -0.36
RABGGTA-209ENST00000559551 K7ENP7 123 aa12.77□□□□□ -0.37
RABGGTA-209ENST00000559551 SEC14L5O43304 696 aa12.77□□□□□ -0.37
RABGGTA-209ENST00000559551 TRAF3IP2O43734 574 aaPredicted RBP12.77□□□□□ -0.37
RABGGTA-209ENST00000559551 OR6A2O95222 327 aa12.77□□□□□ -0.37
RABGGTA-209ENST00000559551 IFNGR1P15260 489 aa12.77□□□□□ -0.37
RABGGTA-209ENST00000559551 SPI1P17947 270 aa12.77□□□□□ -0.37
RABGGTA-209ENST00000559551 ACVR1BP36896 505 aa12.77□□□□□ -0.37
RABGGTA-209ENST00000559551 LHX2P50458 406 aa12.77□□□□□ -0.37
RABGGTA-209ENST00000559551 HSF1Q00613 529 aa12.77□□□□□ -0.37
RABGGTA-209ENST00000559551 POU3F1Q03052 451 aaPredicted RBP12.77□□□□□ -0.37
RABGGTA-209ENST00000559551 EMC4Q5J8M3 183 aa12.77□□□□□ -0.37
RABGGTA-209ENST00000559551 GPR139Q6DWJ6 353 aa12.77□□□□□ -0.37
RABGGTA-209ENST00000559551 INO80CQ6PI98 192 aaPredicted RBP12.77□□□□□ -0.37
RABGGTA-209ENST00000559551 IGFL3Q6UXB1 125 aa12.77□□□□□ -0.37
RABGGTA-209ENST00000559551 UBQLNLQ8IYU4 475 aa12.77□□□□□ -0.37
RABGGTA-209ENST00000559551 TMEM80Q96HE8 168 aa12.77□□□□□ -0.37
RABGGTA-209ENST00000559551 RPRD1BQ9NQG5 326 aaKnown RBP12.77□□□□□ -0.37
RABGGTA-209ENST00000559551 B4GALT7Q9UBV7 327 aa12.77□□□□□ -0.37
RABGGTA-209ENST00000559551 RAXQ9Y2V3 346 aa12.77□□□□□ -0.37
RABGGTA-209ENST00000559551 SNX5Q9Y5X3 404 aa12.77□□□□□ -0.37
RABGGTA-209ENST00000559551 GTF3C1Q12789 2109 aa12.77□□□□□ -0.37
RABGGTA-209ENST00000559551 TAF4O00268 1085 aa12.76□□□□□ -0.37
RABGGTA-209ENST00000559551 EIF1AYO14602 144 aaKnown RBP12.76□□□□□ -0.37
RABGGTA-209ENST00000559551 ARHGEF9O43307 516 aa12.76□□□□□ -0.37
RABGGTA-209ENST00000559551 ENPP1P22413 925 aa12.76□□□□□ -0.37
RABGGTA-209ENST00000559551 GTF2E2P29084 291 aaKnown RBP12.76□□□□□ -0.37
RABGGTA-209ENST00000559551 ETV1P50549 477 aa12.76□□□□□ -0.37
RABGGTA-209ENST00000559551 CLDN18P56856 261 aa12.76□□□□□ -0.37
RABGGTA-209ENST00000559551 SLC35A1P78382 337 aa12.76□□□□□ -0.37
RABGGTA-209ENST00000559551 RAB40BQ12829 278 aa12.76□□□□□ -0.37
RABGGTA-209ENST00000559551 TBCEQ15813 527 aaPredicted RBP12.76□□□□□ -0.37
RABGGTA-209ENST00000559551 SLC35D2Q76EJ3 337 aa12.76□□□□□ -0.37
RABGGTA-209ENST00000559551 PXKQ7Z7A4 578 aa12.76□□□□□ -0.37
RABGGTA-209ENST00000559551 GID4Q8IVV7 300 aa12.76□□□□□ -0.37
RABGGTA-209ENST00000559551 OR6V1Q8N148 313 aa12.76□□□□□ -0.37
RABGGTA-209ENST00000559551 RFKQ969G6 155 aa12.76□□□□□ -0.37
RABGGTA-209ENST00000559551 OR5M11Q96RB7 305 aa12.76□□□□□ -0.37
RABGGTA-209ENST00000559551 SYT4Q9H2B2 425 aa12.76□□□□□ -0.37
RABGGTA-209ENST00000559551 ZDHHC11Q9H8X9 412 aa12.76□□□□□ -0.37
RABGGTA-209ENST00000559551 ADGRL4Q9HBW9 690 aa12.76□□□□□ -0.37
RABGGTA-209ENST00000559551 TNFRSF10DQ9UBN6 386 aa12.76□□□□□ -0.37
RABGGTA-209ENST00000559551 DIMT1Q9UNQ2 313 aaKnown RBP12.76□□□□□ -0.37
RABGGTA-209ENST00000559551 LSM2Q9Y333 95 aaKnown RBP12.76□□□□□ -0.37
RABGGTA-209ENST00000559551 PCDHGA9Q9Y5G4 932 aaKnown RBP12.76□□□□□ -0.37
RABGGTA-209ENST00000559551 DSPP15924 2871 aaKnown RBP12.76□□□□□ -0.37
RABGGTA-209ENST00000559551 NCOA6Q14686 2063 aaPredicted RBP12.76□□□□□ -0.37
RABGGTA-209ENST00000559551 FAM171A2A8MVW0 826 aa12.76□□□□□ -0.37
RABGGTA-209ENST00000559551 SMAD9O15198 467 aaKnown RBP12.76□□□□□ -0.37
RABGGTA-209ENST00000559551 LIMS3P0CW19 117 aa12.76□□□□□ -0.37
RABGGTA-209ENST00000559551 LIMS4P0CW20 117 aa12.76□□□□□ -0.37
RABGGTA-209ENST00000559551 PYCR1P32322 319 aa12.76□□□□□ -0.37
RABGGTA-209ENST00000559551 OPRL1P41146 370 aa12.76□□□□□ -0.37
RABGGTA-209ENST00000559551 MED12LQ86YW9 2145 aa12.76□□□□□ -0.37
RABGGTA-209ENST00000559551 PM20D2Q8IYS1 436 aa12.76□□□□□ -0.37
RABGGTA-209ENST00000559551 OR51G2Q8NGK0 314 aa12.76□□□□□ -0.37
RABGGTA-209ENST00000559551 ZMYND19Q96E35 227 aaPredicted RBP12.76□□□□□ -0.37
RABGGTA-209ENST00000559551 ZNF845Q96IR2 970 aaPredicted RBP12.76□□□□□ -0.37
RABGGTA-209ENST00000559551 TIMP4Q99727 224 aa12.76□□□□□ -0.37
RABGGTA-209ENST00000559551 EMC6Q9BV81 110 aa12.76□□□□□ -0.37
RABGGTA-209ENST00000559551 DEFB127Q9H1M4 99 aa12.76□□□□□ -0.37
RABGGTA-209ENST00000559551 H2AFY2Q9P0M6 372 aaPredicted RBP12.76□□□□□ -0.37
RABGGTA-209ENST00000559551 KLHL13Q9P2N7 655 aa12.76□□□□□ -0.37
RABGGTA-209ENST00000559551 TRAV17A0A0B4J275 112 aa12.75□□□□□ -0.37
RABGGTA-209ENST00000559551 NPIPB13A6NJU9 1138 aa12.75□□□□□ -0.37
RABGGTA-209ENST00000559551 NPIPB4C9JG80 1138 aa12.75□□□□□ -0.37
RABGGTA-209ENST00000559551 CXCL13O43927 109 aa12.75□□□□□ -0.37
RABGGTA-209ENST00000559551 IGHA1P01876 353 aa12.75□□□□□ -0.37
RABGGTA-209ENST00000559551 TFP02787 698 aa12.75□□□□□ -0.37
RABGGTA-209ENST00000559551 MRPL3P09001 348 aaKnown RBP12.75□□□□□ -0.37
RABGGTA-209ENST00000559551 POU3F2P20265 443 aaPredicted RBP12.75□□□□□ -0.37
RABGGTA-209ENST00000559551 AGFG1P52594 562 aaKnown RBP12.75□□□□□ -0.37
RABGGTA-209ENST00000559551 SLC25A1P53007 311 aa12.75□□□□□ -0.37
RABGGTA-209ENST00000559551 UBE2UQ5VVX9 321 aa12.75□□□□□ -0.37
RABGGTA-209ENST00000559551 PLXDC2Q6UX71 529 aa12.75□□□□□ -0.37
RABGGTA-209ENST00000559551 JAZF1Q86VZ6 243 aa12.75□□□□□ -0.37
RABGGTA-209ENST00000559551 FAM109AQ8N4B1 249 aa12.75□□□□□ -0.37
RABGGTA-209ENST00000559551 RFLNBQ8N5W9 214 aa12.75□□□□□ -0.37
RABGGTA-209ENST00000559551 NUAK2Q9H093 628 aa12.75□□□□□ -0.37
RABGGTA-209ENST00000559551 ACKR4Q9NPB9 350 aa12.75□□□□□ -0.37
RABGGTA-209ENST00000559551 QPCTLQ9NXS2 382 aa12.75□□□□□ -0.37
RABGGTA-209ENST00000559551 HAO2Q9NYQ3 351 aa12.75□□□□□ -0.37
RABGGTA-209ENST00000559551 WARS2Q9UGM6 360 aaKnown RBP12.75□□□□□ -0.37
RABGGTA-209ENST00000559551 ENPP5Q9UJA9 477 aa12.75□□□□□ -0.37
RABGGTA-209ENST00000559551 IGKV1D-43A0A0B4J1Z2 117 aa12.74□□□□□ -0.37
RABGGTA-209ENST00000559551 LOC102725191A0A1B0GVB3 256 aa12.74□□□□□ -0.37
RABGGTA-209ENST00000559551 A0A1W2PRG6 482 aa12.74□□□□□ -0.37
RABGGTA-209ENST00000559551 SLC22A23A1A5C7 686 aa12.74□□□□□ -0.37
RABGGTA-209ENST00000559551 PRSS37A4D1T9 235 aa12.74□□□□□ -0.37
RABGGTA-209ENST00000559551 RAB36O95755 333 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms