RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 PTDSS1P48651 473 aaKnown RBP7.13□□□□□ -1.27
SNX1-207ENST00000559401 ZNF84P51523 738 aa7.13□□□□□ -1.27
SNX1-207ENST00000559401 SNRPD2P62316 118 aaKnown RBP7.13□□□□□ -1.27
SNX1-207ENST00000559401 MYBPC1Q00872 1141 aa7.13□□□□□ -1.27
SNX1-207ENST00000559401 NAAAQ02083 359 aa7.13□□□□□ -1.27
SNX1-207ENST00000559401 RAB35Q15286 201 aa7.13□□□□□ -1.27
SNX1-207ENST00000559401 ETFDHQ16134 617 aa7.13□□□□□ -1.27
SNX1-207ENST00000559401 GSG1Q2KHT4 349 aa7.13□□□□□ -1.27
SNX1-207ENST00000559401 FGD3Q5JSP0 725 aa7.13□□□□□ -1.27
SNX1-207ENST00000559401 GLYATQ6IB77 296 aa7.13□□□□□ -1.27
SNX1-207ENST00000559401 C8orf82Q6P1X6 216 aaPredicted RBP7.13□□□□□ -1.27
SNX1-207ENST00000559401 ZNF730Q6ZMV8 503 aa7.13□□□□□ -1.27
SNX1-207ENST00000559401 CBLL1Q75N03 491 aa7.13□□□□□ -1.27
SNX1-207ENST00000559401 RRM2BQ7LG56 351 aa7.13□□□□□ -1.27
SNX1-207ENST00000559401 HDDC2Q7Z4H3 204 aa7.13□□□□□ -1.27
SNX1-207ENST00000559401 MEX3DQ86XN8 651 aaKnown RBP7.13□□□□□ -1.27
SNX1-207ENST00000559401 WDFY1Q8IWB7 410 aa7.13□□□□□ -1.27
SNX1-207ENST00000559401 CCDC36Q8IYA8 594 aa7.13□□□□□ -1.27
SNX1-207ENST00000559401 CDK20Q8IZL9 346 aa7.13□□□□□ -1.27
SNX1-207ENST00000559401 OFCC1Q8IZS5 231 aa7.13□□□□□ -1.27
SNX1-207ENST00000559401 SYT14Q8NB59 555 aa7.13□□□□□ -1.27
SNX1-207ENST00000559401 FAM156AQ8NDB6 213 aa7.13□□□□□ -1.27
SNX1-207ENST00000559401 RBM15BQ8NDT2 890 aaKnown RBP7.13□□□□□ -1.27
SNX1-207ENST00000559401 NOXO1Q8NFA2 376 aa7.13□□□□□ -1.27
SNX1-207ENST00000559401 OR6X1Q8NH79 312 aa7.13□□□□□ -1.27
SNX1-207ENST00000559401 MOSPD2Q8NHP6 518 aa7.13□□□□□ -1.27
SNX1-207ENST00000559401 HTRA1Q92743 480 aa7.13□□□□□ -1.27
SNX1-207ENST00000559401 BPIFA2Q96DR5 249 aa7.13□□□□□ -1.27
SNX1-207ENST00000559401 SLC25A44Q96H78 314 aaPredicted RBP7.13□□□□□ -1.27
SNX1-207ENST00000559401 BOD1Q96IK1 185 aa7.13□□□□□ -1.27
SNX1-207ENST00000559401 COX4I2Q96KJ9 171 aa7.13□□□□□ -1.27
SNX1-207ENST00000559401 LRRC37BQ96QE4 947 aa7.13□□□□□ -1.27
SNX1-207ENST00000559401 GLTPQ9NZD2 209 aa7.13□□□□□ -1.27
SNX1-207ENST00000559401 ABCD2Q9UBJ2 740 aa7.13□□□□□ -1.27
SNX1-207ENST00000559401 TAGLN3Q9UI15 199 aa7.13□□□□□ -1.27
SNX1-207ENST00000559401 FAM32AQ9Y421 112 aaKnown RBP7.13□□□□□ -1.27
SNX1-207ENST00000559401 PMF1-BGLAPU3KQ54 211 aa7.13□□□□□ -1.27
SNX1-207ENST00000559401 PLCE1Q9P212 2302 aa7.13□□□□□ -1.27
SNX1-207ENST00000559401 AKAP9Q99996 3911 aa7.12□□□□□ -1.27
SNX1-207ENST00000559401 ZNF503-AS2A6NEH8 195 aa7.12□□□□□ -1.27
SNX1-207ENST00000559401 FAM171A2A8MVW0 826 aa7.12□□□□□ -1.27
SNX1-207ENST00000559401 VSTM5A8MXK1 200 aa7.12□□□□□ -1.27
SNX1-207ENST00000559401 EFCAB9A8MZ26 197 aa7.12□□□□□ -1.27
SNX1-207ENST00000559401 RNF223E7ERA6 249 aa7.12□□□□□ -1.27
SNX1-207ENST00000559401 hCG_2039718K7EN88 272 aa7.12□□□□□ -1.27
SNX1-207ENST00000559401 DYNC1I1O14576 645 aa7.12□□□□□ -1.27
SNX1-207ENST00000559401 DHHO43323 396 aa7.12□□□□□ -1.27
SNX1-207ENST00000559401 ENTPD5O75356 428 aa7.12□□□□□ -1.27
SNX1-207ENST00000559401 IGKV3-15P01624 115 aa7.12□□□□□ -1.27
SNX1-207ENST00000559401 QDPRP09417 244 aa7.12□□□□□ -1.27
SNX1-207ENST00000559401 PGA4P0DJD7 388 aa7.12□□□□□ -1.27
SNX1-207ENST00000559401 PGA3P0DJD8 388 aa7.12□□□□□ -1.27
SNX1-207ENST00000559401 ACADSP16219 412 aa7.12□□□□□ -1.27
SNX1-207ENST00000559401 CALCRP30988 508 aa7.12□□□□□ -1.27
SNX1-207ENST00000559401 GPR4P46093 362 aa7.12□□□□□ -1.27
SNX1-207ENST00000559401 DAP3P51398 398 aaKnown RBP7.12□□□□□ -1.27
SNX1-207ENST00000559401 CD47Q08722 323 aa7.12□□□□□ -1.27
SNX1-207ENST00000559401 SNTB2Q13425 540 aaKnown RBP7.12□□□□□ -1.27
SNX1-207ENST00000559401 TNK1Q13470 666 aa7.12□□□□□ -1.27
SNX1-207ENST00000559401 KRT72Q14CN4 511 aa7.12□□□□□ -1.27
SNX1-207ENST00000559401 LAPTM4AQ15012 233 aa7.12□□□□□ -1.27
SNX1-207ENST00000559401 ALG10Q5BKT4 473 aa7.12□□□□□ -1.27
SNX1-207ENST00000559401 C11orf71Q6IPW1 123 aa7.12□□□□□ -1.27
SNX1-207ENST00000559401 KRT80Q6KB66 452 aa7.12□□□□□ -1.27
SNX1-207ENST00000559401 CLEC2AQ6UVW9 174 aa7.12□□□□□ -1.27
SNX1-207ENST00000559401 MYPOPQ86VE0 399 aaPredicted RBP7.12□□□□□ -1.27
SNX1-207ENST00000559401 IGFN1Q86VF2 1251 aa7.12□□□□□ -1.27
SNX1-207ENST00000559401 NRMQ8IXM6 262 aa7.12□□□□□ -1.27
SNX1-207ENST00000559401 OR4F15Q8NGB8 312 aa7.12□□□□□ -1.27
SNX1-207ENST00000559401 OR51A7Q8NH64 312 aa7.12□□□□□ -1.27
SNX1-207ENST00000559401 ASB10Q8WXI3 467 aa7.12□□□□□ -1.27
SNX1-207ENST00000559401 TMEM54Q969K7 222 aa7.12□□□□□ -1.27
SNX1-207ENST00000559401 ZNF347Q96SE7 839 aa7.12□□□□□ -1.27
SNX1-207ENST00000559401 VRK1Q99986 396 aaPredicted RBP7.12□□□□□ -1.27
SNX1-207ENST00000559401 RNF121Q9H920 327 aa7.12□□□□□ -1.27
SNX1-207ENST00000559401 NOX3Q9HBY0 568 aa7.12□□□□□ -1.27
SNX1-207ENST00000559401 CA10Q9NS85 328 aa7.12□□□□□ -1.27
SNX1-207ENST00000559401 ARL8BQ9NVJ2 186 aa7.12□□□□□ -1.27
SNX1-207ENST00000559401 STX18Q9P2W9 335 aaKnown RBP7.12□□□□□ -1.27
SNX1-207ENST00000559401 CRNNQ9UBG3 495 aaPredicted RBP7.12□□□□□ -1.27
SNX1-207ENST00000559401 SAMD4AQ9UPU9 718 aaKnown RBP7.12□□□□□ -1.27
SNX1-207ENST00000559401 C2CD3Q4AC94 2353 aa7.11□□□□□ -1.27
SNX1-207ENST00000559401 TRAV27A0A087WT01 109 aa7.11□□□□□ -1.27
SNX1-207ENST00000559401 IGHV2OR16-5A0A0B4J2B6 119 aa7.11□□□□□ -1.27
SNX1-207ENST00000559401 FFAR1O14842 300 aa7.11□□□□□ -1.27
SNX1-207ENST00000559401 TRMUO75648 421 aaKnown RBP7.11□□□□□ -1.27
SNX1-207ENST00000559401 UBL3O95164 117 aa7.11□□□□□ -1.27
SNX1-207ENST00000559401 SLC2A10O95528 541 aa7.11□□□□□ -1.27
SNX1-207ENST00000559401 LY6G6DO95868 133 aa7.11□□□□□ -1.27
SNX1-207ENST00000559401 IGF2P01344 180 aa7.11□□□□□ -1.27
SNX1-207ENST00000559401 IGLV1-44P01699 117 aa7.11□□□□□ -1.27
SNX1-207ENST00000559401 H1F0P07305 194 aaKnown RBP7.11□□□□□ -1.27
SNX1-207ENST00000559401 OR4A8P0C604 315 aa7.11□□□□□ -1.27
SNX1-207ENST00000559401 PATE4P0C8F1 98 aa7.11□□□□□ -1.27
SNX1-207ENST00000559401 OR8G3PP0DMU2 310 aa7.11□□□□□ -1.27
SNX1-207ENST00000559401 NR2C1P13056 603 aa7.11□□□□□ -1.27
SNX1-207ENST00000559401 MAKP20794 623 aa7.11□□□□□ -1.27
SNX1-207ENST00000559401 FUT4P22083 530 aa7.11□□□□□ -1.27
SNX1-207ENST00000559401 MSX2P35548 267 aaPredicted RBP7.11□□□□□ -1.27
SNX1-207ENST00000559401 RPL4P36578 427 aaKnown RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms