RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 MYPOPQ86VE0 399 aaPredicted RBP16.35■□□□□ 0.21
CASC4-209ENST00000559222 P2RY8Q86VZ1 359 aa16.35■□□□□ 0.21
CASC4-209ENST00000559222 C17orf78Q8N4C9 275 aa16.35■□□□□ 0.21
CASC4-209ENST00000559222 NOXO1Q8NFA2 376 aa16.35■□□□□ 0.21
CASC4-209ENST00000559222 OR9Q2Q8NGE9 314 aa16.35■□□□□ 0.21
CASC4-209ENST00000559222 CANT1Q8WVQ1 401 aa16.35■□□□□ 0.21
CASC4-209ENST00000559222 ZNF566Q969W8 418 aa16.35■□□□□ 0.21
CASC4-209ENST00000559222 SLC25A44Q96H78 314 aaPredicted RBP16.35■□□□□ 0.21
CASC4-209ENST00000559222 RSRC1Q96IZ7 334 aaKnown RBP16.35■□□□□ 0.21
CASC4-209ENST00000559222 LRR1Q96L50 414 aa16.35■□□□□ 0.21
CASC4-209ENST00000559222 LRGUKQ96M69 825 aa16.35■□□□□ 0.21
CASC4-209ENST00000559222 ADAD1Q96M93 576 aaKnown RBP16.35■□□□□ 0.21
CASC4-209ENST00000559222 NOX3Q9HBY0 568 aa16.35■□□□□ 0.21
CASC4-209ENST00000559222 CCM2LQ9NUG4 571 aaPredicted RBP16.35■□□□□ 0.21
CASC4-209ENST00000559222 GLTPQ9NZD2 209 aa16.35■□□□□ 0.21
CASC4-209ENST00000559222 ST6GALNAC2Q9UJ37 374 aa16.35■□□□□ 0.21
CASC4-209ENST00000559222 ZNF346Q9UL40 294 aaKnown RBP16.35■□□□□ 0.21
CASC4-209ENST00000559222 SIGLEC7Q9Y286 467 aa16.35■□□□□ 0.21
CASC4-209ENST00000559222 ADAM18Q9Y3Q7 739 aa16.35■□□□□ 0.21
CASC4-209ENST00000559222 SPG11Q96JI7 2443 aa16.34■□□□□ 0.21
CASC4-209ENST00000559222 IGHMP01871 453 aa16.34■□□□□ 0.21
CASC4-209ENST00000559222 B4GALT1P15291 398 aa16.34■□□□□ 0.21
CASC4-209ENST00000559222 SLC9A3P48764 834 aa16.34■□□□□ 0.21
CASC4-209ENST00000559222 ERVK-25P63136 954 aa16.34■□□□□ 0.21
CASC4-209ENST00000559222 CBX1P83916 185 aa16.34■□□□□ 0.21
CASC4-209ENST00000559222 TGFBR3Q03167 851 aa16.34■□□□□ 0.21
CASC4-209ENST00000559222 FLOT2Q14254 428 aa16.34■□□□□ 0.21
CASC4-209ENST00000559222 ZBED5Q49AG3 693 aa16.34■□□□□ 0.21
CASC4-209ENST00000559222 ANKRD16Q6P6B7 361 aa16.34■□□□□ 0.21
CASC4-209ENST00000559222 RRM2BQ7LG56 351 aa16.34■□□□□ 0.21
CASC4-209ENST00000559222 ZNF519Q8TB69 540 aa16.34■□□□□ 0.21
CASC4-209ENST00000559222 NMD3Q96D46 503 aaKnown RBP16.34■□□□□ 0.21
CASC4-209ENST00000559222 BOD1Q96IK1 185 aa16.34■□□□□ 0.21
CASC4-209ENST00000559222 USB1Q9BQ65 265 aaKnown RBP16.34■□□□□ 0.21
CASC4-209ENST00000559222 KATNB1Q9BVA0 655 aa16.34■□□□□ 0.21
CASC4-209ENST00000559222 MRPL13Q9BYD1 178 aaKnown RBP16.34■□□□□ 0.21
CASC4-209ENST00000559222 TXNIPQ9H3M7 391 aa16.34■□□□□ 0.21
CASC4-209ENST00000559222 TMEM5Q9Y2B1 443 aa16.34■□□□□ 0.21
CASC4-209ENST00000559222 AMDHD2Q9Y303 409 aa16.34■□□□□ 0.21
CASC4-209ENST00000559222 HTR3EA5X5Y0 456 aa16.33■□□□□ 0.2
CASC4-209ENST00000559222 UNC119BA6NIH7 251 aa16.33■□□□□ 0.2
CASC4-209ENST00000559222 ZNF99A8MXY4 864 aaPredicted RBP16.33■□□□□ 0.2
CASC4-209ENST00000559222 H7C1C5 153 aa16.33■□□□□ 0.2
CASC4-209ENST00000559222 IMPA2O14732 288 aa16.33■□□□□ 0.2
CASC4-209ENST00000559222 PTP4A3O75365 173 aa16.33■□□□□ 0.2
CASC4-209ENST00000559222 ATE1O95260 518 aa16.33■□□□□ 0.2
CASC4-209ENST00000559222 SLC2A10O95528 541 aa16.33■□□□□ 0.2
CASC4-209ENST00000559222 CELA3BP08861 270 aa16.33■□□□□ 0.2
CASC4-209ENST00000559222 ACADSP16219 412 aa16.33■□□□□ 0.2
CASC4-209ENST00000559222 DAP3P51398 398 aaKnown RBP16.33■□□□□ 0.2
CASC4-209ENST00000559222 LCN6P62502 163 aa16.33■□□□□ 0.2
CASC4-209ENST00000559222 CHRNB3Q05901 458 aa16.33■□□□□ 0.2
CASC4-209ENST00000559222 HIST3H3Q16695 136 aa16.33■□□□□ 0.2
CASC4-209ENST00000559222 FAM98BQ52LJ0 330 aaKnown RBP16.33■□□□□ 0.2
CASC4-209ENST00000559222 PGBD2Q6P3X8 592 aa16.33■□□□□ 0.2
CASC4-209ENST00000559222 SPATA24Q86W54 205 aa16.33■□□□□ 0.2
CASC4-209ENST00000559222 CDK20Q8IZL9 346 aa16.33■□□□□ 0.2
CASC4-209ENST00000559222 ZNF224Q9NZL3 707 aa16.33■□□□□ 0.2
CASC4-209ENST00000559222 ITGB1BP2Q9UKP3 347 aa16.33■□□□□ 0.2
CASC4-209ENST00000559222 AURKCQ9UQB9 309 aa16.33■□□□□ 0.2
CASC4-209ENST00000559222 RNF115Q9Y4L5 304 aa16.33■□□□□ 0.2
CASC4-209ENST00000559222 ARPC4-TTLL3A0A0A6YYG9 625 aa16.32■□□□□ 0.2
CASC4-209ENST00000559222 DHRS12A0PJE2 317 aa16.32■□□□□ 0.2
CASC4-209ENST00000559222 AQP12BA6NM10 295 aa16.32■□□□□ 0.2
CASC4-209ENST00000559222 SHISA9B4DS77 424 aa16.32■□□□□ 0.2
CASC4-209ENST00000559222 TNFRSF11BO00300 401 aa16.32■□□□□ 0.2
CASC4-209ENST00000559222 ABCD4O14678 606 aa16.32■□□□□ 0.2
CASC4-209ENST00000559222 OR10H3O60404 316 aa16.32■□□□□ 0.2
CASC4-209ENST00000559222 DSCAMO60469 2012 aa16.32■□□□□ 0.2
CASC4-209ENST00000559222 IGHG1P01857 330 aa16.32■□□□□ 0.2
CASC4-209ENST00000559222 CD3EP07766 207 aa16.32■□□□□ 0.2
CASC4-209ENST00000559222 ROS1P08922 2347 aa16.32■□□□□ 0.2
CASC4-209ENST00000559222 QDPRP09417 244 aa16.32■□□□□ 0.2
CASC4-209ENST00000559222 ACVR1BP36896 505 aa16.32■□□□□ 0.2
CASC4-209ENST00000559222 IST1P53990 364 aa16.32■□□□□ 0.2
CASC4-209ENST00000559222 NR1H2P55055 460 aa16.32■□□□□ 0.2
CASC4-209ENST00000559222 SH3BGRP55822 239 aaPredicted RBP16.32■□□□□ 0.2
CASC4-209ENST00000559222 CLRN1P58418 232 aa16.32■□□□□ 0.2
CASC4-209ENST00000559222 SMIM11AP58511 58 aa16.32■□□□□ 0.2
CASC4-209ENST00000559222 PRPS1P60891 318 aa16.32■□□□□ 0.2
CASC4-209ENST00000559222 RPL27P61353 136 aaKnown RBP16.32■□□□□ 0.2
CASC4-209ENST00000559222 DBPQ10586 325 aaPredicted RBP16.32■□□□□ 0.2
CASC4-209ENST00000559222 B3GLCTQ6Y288 498 aa16.32■□□□□ 0.2
CASC4-209ENST00000559222 ZNF813Q6ZN06 617 aa16.32■□□□□ 0.2
CASC4-209ENST00000559222 FAM122BQ7Z309 247 aa16.32■□□□□ 0.2
CASC4-209ENST00000559222 AQP12AQ8IXF9 295 aa16.32■□□□□ 0.2
CASC4-209ENST00000559222 FGFBP3Q8TAT2 258 aa16.32■□□□□ 0.2
CASC4-209ENST00000559222 AKAP1Q92667 903 aaKnown RBP eCLIP16.32■□□□□ 0.2
CASC4-209ENST00000559222 MCHR2Q969V1 340 aa16.32■□□□□ 0.2
CASC4-209ENST00000559222 SLCO4A1Q96BD0 722 aa16.32■□□□□ 0.2
CASC4-209ENST00000559222 RASD2Q96D21 266 aa16.32■□□□□ 0.2
CASC4-209ENST00000559222 Q96M85 177 aa16.32■□□□□ 0.2
CASC4-209ENST00000559222 KCNK17Q96T54 332 aa16.32■□□□□ 0.2
CASC4-209ENST00000559222 FOXB1Q99853 325 aa16.32■□□□□ 0.2
CASC4-209ENST00000559222 CHID1Q9BWS9 393 aa16.32■□□□□ 0.2
CASC4-209ENST00000559222 TRIM15Q9C019 465 aa16.32■□□□□ 0.2
CASC4-209ENST00000559222 LRMDAQ9H2I8 198 aa16.32■□□□□ 0.2
CASC4-209ENST00000559222 ESRP2Q9H6T0 727 aaKnown RBP16.32■□□□□ 0.2
CASC4-209ENST00000559222 B3GAT2Q9NPZ5 323 aa16.32■□□□□ 0.2
CASC4-209ENST00000559222 U3KQV3 271 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms