RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 FXNQ16595 210 aa11.66□□□□□ -0.54
VPS18-203ENST00000558855 SWT1Q5T5J6 900 aaKnown RBP11.66□□□□□ -0.54
VPS18-203ENST00000558855 ZNF613Q6PF04 617 aa11.66□□□□□ -0.54
VPS18-203ENST00000558855 LRFN4Q6PJG9 635 aa11.66□□□□□ -0.54
VPS18-203ENST00000558855 PXKQ7Z7A4 578 aa11.66□□□□□ -0.54
VPS18-203ENST00000558855 NKAIN4Q8IVV8 208 aa11.66□□□□□ -0.54
VPS18-203ENST00000558855 OR6N1Q8NGY5 312 aa11.66□□□□□ -0.54
VPS18-203ENST00000558855 PFN4Q8NHR9 129 aa11.66□□□□□ -0.54
VPS18-203ENST00000558855 STON2Q8WXE9 905 aa11.66□□□□□ -0.54
VPS18-203ENST00000558855 MAGEB18Q96M61 343 aa11.66□□□□□ -0.54
VPS18-203ENST00000558855 EPYCQ99645 322 aa11.66□□□□□ -0.54
VPS18-203ENST00000558855 SH3GL3Q99963 347 aa11.66□□□□□ -0.54
VPS18-203ENST00000558855 CORO2BQ9UQ03 480 aa11.66□□□□□ -0.54
VPS18-203ENST00000558855 NDUFAF1Q9Y375 327 aa11.66□□□□□ -0.54
VPS18-203ENST00000558855 WNT9BO14905 357 aa11.65□□□□□ -0.54
VPS18-203ENST00000558855 AKAP8O43823 692 aaKnown RBP11.65□□□□□ -0.54
VPS18-203ENST00000558855 SERPINB7O75635 380 aa11.65□□□□□ -0.54
VPS18-203ENST00000558855 NCR1O76036 304 aa11.65□□□□□ -0.54
VPS18-203ENST00000558855 HPXP02790 462 aa11.65□□□□□ -0.54
VPS18-203ENST00000558855 TACSTD2P09758 323 aa11.65□□□□□ -0.54
VPS18-203ENST00000558855 PGA4P0DJD7 388 aa11.65□□□□□ -0.54
VPS18-203ENST00000558855 PGA3P0DJD8 388 aa11.65□□□□□ -0.54
VPS18-203ENST00000558855 CCL2P13500 99 aa11.65□□□□□ -0.54
VPS18-203ENST00000558855 FUT1P19526 365 aa11.65□□□□□ -0.54
VPS18-203ENST00000558855 TCN1P20061 433 aaPredicted RBP11.65□□□□□ -0.54
VPS18-203ENST00000558855 ALDH3B1P43353 468 aa11.65□□□□□ -0.54
VPS18-203ENST00000558855 CSNK1A1P48729 337 aa11.65□□□□□ -0.54
VPS18-203ENST00000558855 GZMKP49863 264 aa11.65□□□□□ -0.54
VPS18-203ENST00000558855 ERVS71-1P61550 626 aa11.65□□□□□ -0.54
VPS18-203ENST00000558855 MYBPC1Q00872 1141 aa11.65□□□□□ -0.54
VPS18-203ENST00000558855 RBBP4Q09028 425 aa11.65□□□□□ -0.54
VPS18-203ENST00000558855 HNRNPA0Q13151 305 aaKnown RBP11.65□□□□□ -0.54
VPS18-203ENST00000558855 RIN1Q13671 783 aa11.65□□□□□ -0.54
VPS18-203ENST00000558855 TMEM255AQ5JRV8 349 aa11.65□□□□□ -0.54
VPS18-203ENST00000558855 ELFN2Q5R3F8 820 aa11.65□□□□□ -0.54
VPS18-203ENST00000558855 SLC35D2Q76EJ3 337 aa11.65□□□□□ -0.54
VPS18-203ENST00000558855 CALHM3Q86XJ0 350 aa11.65□□□□□ -0.54
VPS18-203ENST00000558855 GTF3AQ92664 365 aaKnown RBP11.65□□□□□ -0.54
VPS18-203ENST00000558855 MRPL24Q96A35 216 aaKnown RBP11.65□□□□□ -0.54
VPS18-203ENST00000558855 TSPAN32Q96QS1 320 aa11.65□□□□□ -0.54
VPS18-203ENST00000558855 SNX18Q96RF0 628 aa11.65□□□□□ -0.54
VPS18-203ENST00000558855 BEX2Q9BXY8 128 aa11.65□□□□□ -0.54
VPS18-203ENST00000558855 PCDHAC1Q9H158 963 aa11.65□□□□□ -0.54
VPS18-203ENST00000558855 C20orf141Q9NUB4 165 aa11.65□□□□□ -0.54
VPS18-203ENST00000558855 SELENONQ9NZV5 590 aa11.65□□□□□ -0.54
VPS18-203ENST00000558855 POFUT2Q9Y2G5 429 aa11.65□□□□□ -0.54
VPS18-203ENST00000558855 TANC2Q9HCD6 1990 aa11.65□□□□□ -0.55
VPS18-203ENST00000558855 IGKV1D-43A0A0B4J1Z2 117 aa11.64□□□□□ -0.55
VPS18-203ENST00000558855 A0A0G2JND7 137 aa11.64□□□□□ -0.55
VPS18-203ENST00000558855 TRAPPC13A5PLN9 417 aa11.64□□□□□ -0.55
VPS18-203ENST00000558855 ANGPT2O15123 496 aa11.64□□□□□ -0.55
VPS18-203ENST00000558855 PIP5K1CO60331 668 aa11.64□□□□□ -0.55
VPS18-203ENST00000558855 MT-ATP6P00846 226 aa11.64□□□□□ -0.55
VPS18-203ENST00000558855 C8BP07358 591 aa11.64□□□□□ -0.55
VPS18-203ENST00000558855 ASAH2BP0C7U1 165 aa11.64□□□□□ -0.55
VPS18-203ENST00000558855 H2AFXP16104 143 aaPredicted RBP11.64□□□□□ -0.55
VPS18-203ENST00000558855 RAB1AP62820 205 aa11.64□□□□□ -0.55
VPS18-203ENST00000558855 ZP4Q12836 540 aa11.64□□□□□ -0.55
VPS18-203ENST00000558855 CCNIQ14094 377 aa11.64□□□□□ -0.55
VPS18-203ENST00000558855 VMACQ2NL98 169 aa11.64□□□□□ -0.55
VPS18-203ENST00000558855 IQCCQ4KMZ1 466 aa11.64□□□□□ -0.55
VPS18-203ENST00000558855 FAM166AQ6J272 317 aa11.64□□□□□ -0.55
VPS18-203ENST00000558855 NANOGP8Q6NSW7 305 aa11.64□□□□□ -0.55
VPS18-203ENST00000558855 ZNF786Q8N393 782 aa11.64□□□□□ -0.55
VPS18-203ENST00000558855 OR6X1Q8NH79 312 aa11.64□□□□□ -0.55
VPS18-203ENST00000558855 TMEM255BQ8WV15 326 aa11.64□□□□□ -0.55
VPS18-203ENST00000558855 YIPF5Q969M3 257 aa11.64□□□□□ -0.55
VPS18-203ENST00000558855 ZNF347Q96SE7 839 aa11.64□□□□□ -0.55
VPS18-203ENST00000558855 TMEM120AQ9BXJ8 343 aa11.64□□□□□ -0.55
VPS18-203ENST00000558855 SHARPINQ9H0F6 387 aa11.64□□□□□ -0.55
VPS18-203ENST00000558855 RAB1BQ9H0U4 201 aa11.64□□□□□ -0.55
VPS18-203ENST00000558855 NANOGQ9H9S0 305 aa11.64□□□□□ -0.55
VPS18-203ENST00000558855 DYNLRB1Q9NP97 96 aa11.64□□□□□ -0.55
VPS18-203ENST00000558855 TMEM38BQ9NVV0 291 aa11.64□□□□□ -0.55
VPS18-203ENST00000558855 GLTPQ9NZD2 209 aa11.64□□□□□ -0.55
VPS18-203ENST00000558855 SLC13A4Q9UKG4 626 aa11.64□□□□□ -0.55
VPS18-203ENST00000558855 ZNF726A6NNF4 738 aa11.63□□□□□ -0.55
VPS18-203ENST00000558855 HMGB1P1B2RPK0 211 aaPredicted RBP11.63□□□□□ -0.55
VPS18-203ENST00000558855 CLPTM1O96005 669 aa11.63□□□□□ -0.55
VPS18-203ENST00000558855 TGFAP01135 160 aa11.63□□□□□ -0.55
VPS18-203ENST00000558855 IFNA2P01563 188 aa11.63□□□□□ -0.55
VPS18-203ENST00000558855 F13BP05160 661 aa11.63□□□□□ -0.55
VPS18-203ENST00000558855 COL8A2P25067 703 aa11.63□□□□□ -0.55
VPS18-203ENST00000558855 RBMXP38159 391 aaKnown RBP11.63□□□□□ -0.55
VPS18-203ENST00000558855 CR1LQ2VPA4 569 aa11.63□□□□□ -0.55
VPS18-203ENST00000558855 ALKBH6Q3KRA9 238 aa11.63□□□□□ -0.55
VPS18-203ENST00000558855 TTC33Q6PID6 262 aaPredicted RBP11.63□□□□□ -0.55
VPS18-203ENST00000558855 CCDC80Q76M96 950 aa11.63□□□□□ -0.55
VPS18-203ENST00000558855 MEX3DQ86XN8 651 aaKnown RBP11.63□□□□□ -0.55
VPS18-203ENST00000558855 SLC22A24Q8N4F4 322 aa11.63□□□□□ -0.55
VPS18-203ENST00000558855 BHLHE22Q8NFJ8 381 aaPredicted RBP11.63□□□□□ -0.55
VPS18-203ENST00000558855 MOSPD2Q8NHP6 518 aa11.63□□□□□ -0.55
VPS18-203ENST00000558855 UBASH3BQ8TF42 649 aa11.63□□□□□ -0.55
VPS18-203ENST00000558855 C1orf159Q96HA4 380 aa11.63□□□□□ -0.55
VPS18-203ENST00000558855 OR51B6Q9H340 312 aa11.63□□□□□ -0.55
VPS18-203ENST00000558855 KCNS2Q9ULS6 477 aa11.63□□□□□ -0.55
VPS18-203ENST00000558855 CMAHPQ9Y471 501 aa11.63□□□□□ -0.55
VPS18-203ENST00000558855 DHHO43323 396 aa11.62□□□□□ -0.55
VPS18-203ENST00000558855 FAM157BP0CG42 384 aa11.62□□□□□ -0.55
VPS18-203ENST00000558855 PAX7P23759 505 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms