RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 KRT80Q6KB66 452 aa9.93□□□□□ -0.82
CASC4-205ENST00000558735 SLC35D2Q76EJ3 337 aa9.93□□□□□ -0.82
CASC4-205ENST00000558735 SKA3Q8IX90 412 aa9.93□□□□□ -0.82
CASC4-205ENST00000558735 CDK20Q8IZL9 346 aa9.93□□□□□ -0.82
CASC4-205ENST00000558735 ZNF540Q8NDQ6 660 aa9.93□□□□□ -0.82
CASC4-205ENST00000558735 OR10A6Q8NH74 314 aa9.93□□□□□ -0.82
CASC4-205ENST00000558735 VANGL1Q8TAA9 524 aaPredicted RBP9.93□□□□□ -0.82
CASC4-205ENST00000558735 TMEM54Q969K7 222 aa9.93□□□□□ -0.82
CASC4-205ENST00000558735 TAMM41Q96BW9 452 aa9.93□□□□□ -0.82
CASC4-205ENST00000558735 FOXB1Q99853 325 aa9.93□□□□□ -0.82
CASC4-205ENST00000558735 ULBP2Q9BZM5 246 aa9.93□□□□□ -0.82
CASC4-205ENST00000558735 B3GAT2Q9NPZ5 323 aa9.93□□□□□ -0.82
CASC4-205ENST00000558735 CMAHPQ9Y471 501 aa9.93□□□□□ -0.82
CASC4-205ENST00000558735 LRP5LA4QPB2 252 aa9.92□□□□□ -0.82
CASC4-205ENST00000558735 TRAPPC13A5PLN9 417 aa9.92□□□□□ -0.82
CASC4-205ENST00000558735 LYNX1G3V0Z9 82 aa9.92□□□□□ -0.82
CASC4-205ENST00000558735 TGFAP01135 160 aa9.92□□□□□ -0.82
CASC4-205ENST00000558735 LYNX1P0DP58 116 aa9.92□□□□□ -0.82
CASC4-205ENST00000558735 B4GALT1P15291 398 aa9.92□□□□□ -0.82
CASC4-205ENST00000558735 GLRXP35754 106 aa9.92□□□□□ -0.82
CASC4-205ENST00000558735 GIPRP48546 466 aa9.92□□□□□ -0.82
CASC4-205ENST00000558735 PTDSS1P48651 473 aaKnown RBP9.92□□□□□ -0.82
CASC4-205ENST00000558735 CSNK1A1P48729 337 aa9.92□□□□□ -0.82
CASC4-205ENST00000558735 EVX1P49640 407 aa9.92□□□□□ -0.82
CASC4-205ENST00000558735 FAM120AOSQ5T036 256 aa9.92□□□□□ -0.82
CASC4-205ENST00000558735 LIPNQ5VXI9 398 aa9.92□□□□□ -0.82
CASC4-205ENST00000558735 METTL21CQ5VZV1 264 aa9.92□□□□□ -0.82
CASC4-205ENST00000558735 FAM166AQ6J272 317 aa9.92□□□□□ -0.82
CASC4-205ENST00000558735 NANOGP8Q6NSW7 305 aa9.92□□□□□ -0.82
CASC4-205ENST00000558735 TTC33Q6PID6 262 aaPredicted RBP9.92□□□□□ -0.82
CASC4-205ENST00000558735 CCDC80Q76M96 950 aa9.92□□□□□ -0.82
CASC4-205ENST00000558735 HDXQ7Z353 690 aa9.92□□□□□ -0.82
CASC4-205ENST00000558735 PIWIL3Q7Z3Z3 882 aaKnown RBP9.92□□□□□ -0.82
CASC4-205ENST00000558735 PATL1Q86TB9 770 aaKnown RBP9.92□□□□□ -0.82
CASC4-205ENST00000558735 ZNF786Q8N393 782 aa9.92□□□□□ -0.82
CASC4-205ENST00000558735 OR6X1Q8NH79 312 aa9.92□□□□□ -0.82
CASC4-205ENST00000558735 UBASH3BQ8TF42 649 aa9.92□□□□□ -0.82
CASC4-205ENST00000558735 PRSS27Q9BQR3 290 aa9.92□□□□□ -0.82
CASC4-205ENST00000558735 ZNF426Q9BUY5 554 aa9.92□□□□□ -0.82
CASC4-205ENST00000558735 MRPL37Q9BZE1 423 aaKnown RBP9.92□□□□□ -0.82
CASC4-205ENST00000558735 PCDHAC1Q9H158 963 aa9.92□□□□□ -0.82
CASC4-205ENST00000558735 DENND2DQ9H6A0 471 aaPredicted RBP9.92□□□□□ -0.82
CASC4-205ENST00000558735 NANOGQ9H9S0 305 aa9.92□□□□□ -0.82
CASC4-205ENST00000558735 NPHS2Q9NP85 383 aa9.92□□□□□ -0.82
CASC4-205ENST00000558735 MEPEQ9NQ76 525 aaPredicted RBP9.92□□□□□ -0.82
CASC4-205ENST00000558735 NANSQ9NR45 359 aa9.92□□□□□ -0.82
CASC4-205ENST00000558735 GLTPQ9NZD2 209 aa9.92□□□□□ -0.82
CASC4-205ENST00000558735 SLC7A7Q9UM01 511 aa9.92□□□□□ -0.82
CASC4-205ENST00000558735 TRIM33Q9UPN9 1127 aa9.92□□□□□ -0.82
CASC4-205ENST00000558735 MGAM2Q2M2H8 2515 aa9.92□□□□□ -0.82
CASC4-205ENST00000558735 A0A0G2JND7 137 aa9.91□□□□□ -0.82
CASC4-205ENST00000558735 SYNGR3O43761 229 aa9.91□□□□□ -0.82
CASC4-205ENST00000558735 OR6A2O95222 327 aa9.91□□□□□ -0.82
CASC4-205ENST00000558735 TACSTD2P09758 323 aa9.91□□□□□ -0.82
CASC4-205ENST00000558735 ASAH2BP0C7U1 165 aa9.91□□□□□ -0.82
CASC4-205ENST00000558735 IL2RGP31785 369 aa9.91□□□□□ -0.82
CASC4-205ENST00000558735 PCGF2P35227 344 aa9.91□□□□□ -0.82
CASC4-205ENST00000558735 SEC24CP53992 1094 aa9.91□□□□□ -0.82
CASC4-205ENST00000558735 RIN1Q13671 783 aa9.91□□□□□ -0.82
CASC4-205ENST00000558735 RAB39AQ14964 217 aa9.91□□□□□ -0.82
CASC4-205ENST00000558735 FXNQ16595 210 aa9.91□□□□□ -0.82
CASC4-205ENST00000558735 VMACQ2NL98 169 aa9.91□□□□□ -0.82
CASC4-205ENST00000558735 TRMT5Q32P41 509 aaKnown RBP9.91□□□□□ -0.82
CASC4-205ENST00000558735 IL17RELQ6ZVW7 336 aa9.91□□□□□ -0.82
CASC4-205ENST00000558735 LRP11Q86VZ4 500 aa9.91□□□□□ -0.82
CASC4-205ENST00000558735 SNX32Q86XE0 403 aa9.91□□□□□ -0.82
CASC4-205ENST00000558735 CALHM3Q86XJ0 350 aa9.91□□□□□ -0.82
CASC4-205ENST00000558735 MEX3DQ86XN8 651 aaKnown RBP9.91□□□□□ -0.82
CASC4-205ENST00000558735 ZNF584Q8IVC4 421 aa9.91□□□□□ -0.82
CASC4-205ENST00000558735 SLC30A8Q8IWU4 369 aa9.91□□□□□ -0.82
CASC4-205ENST00000558735 SLC26A7Q8TE54 656 aa9.91□□□□□ -0.82
CASC4-205ENST00000558735 MRPL24Q96A35 216 aaKnown RBP9.91□□□□□ -0.82
CASC4-205ENST00000558735 SLC25A44Q96H78 314 aaPredicted RBP9.91□□□□□ -0.82
CASC4-205ENST00000558735 MPP4Q96JB8 637 aa9.91□□□□□ -0.82
CASC4-205ENST00000558735 CHODLQ9H9P2 273 aa9.91□□□□□ -0.82
CASC4-205ENST00000558735 REV1Q9UBZ9 1251 aa9.91□□□□□ -0.82
CASC4-205ENST00000558735 KCNS2Q9ULS6 477 aa9.91□□□□□ -0.82
CASC4-205ENST00000558735 PKD1L1Q8TDX9 2849 aa9.91□□□□□ -0.82
CASC4-205ENST00000558735 BLOC1S5-TXNDC5H3BN57 136 aa9.9□□□□□ -0.82
CASC4-205ENST00000558735 KPNA4O00629 521 aaPredicted RBP9.9□□□□□ -0.82
CASC4-205ENST00000558735 DHHO43323 396 aa9.9□□□□□ -0.82
CASC4-205ENST00000558735 RNF13O43567 381 aa9.9□□□□□ -0.82
CASC4-205ENST00000558735 SPRY1O43609 319 aaPredicted RBP9.9□□□□□ -0.82
CASC4-205ENST00000558735 HIST1H2ABP04908 130 aa9.9□□□□□ -0.82
CASC4-205ENST00000558735 SERPINA5P05154 406 aa9.9□□□□□ -0.82
CASC4-205ENST00000558735 QDPRP09417 244 aa9.9□□□□□ -0.82
CASC4-205ENST00000558735 PGA4P0DJD7 388 aa9.9□□□□□ -0.82
CASC4-205ENST00000558735 PGA3P0DJD8 388 aa9.9□□□□□ -0.82
CASC4-205ENST00000558735 OR8G3PP0DMU2 310 aa9.9□□□□□ -0.82
CASC4-205ENST00000558735 TCN1P20061 433 aaPredicted RBP9.9□□□□□ -0.82
CASC4-205ENST00000558735 HNF1AP20823 631 aa9.9□□□□□ -0.82
CASC4-205ENST00000558735 COL8A2P25067 703 aa9.9□□□□□ -0.82
CASC4-205ENST00000558735 SRSF2Q01130 221 aaKnown RBP9.9□□□□□ -0.82
CASC4-205ENST00000558735 CYLC2Q14093 348 aaPredicted RBP9.9□□□□□ -0.82
CASC4-205ENST00000558735 MELKQ14680 651 aa9.9□□□□□ -0.82
CASC4-205ENST00000558735 HIST3H3Q16695 136 aa9.9□□□□□ -0.82
CASC4-205ENST00000558735 RABL3Q5HYI8 236 aa9.9□□□□□ -0.82
CASC4-205ENST00000558735 INTS11Q5TA45 600 aaKnown RBP9.9□□□□□ -0.82
CASC4-205ENST00000558735 HIST3H2AQ7L7L0 130 aa9.9□□□□□ -0.82
CASC4-205ENST00000558735 NKAIN4Q8IVV8 208 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms