RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 NUP37Q8NFH4 326 aa10.32□□□□□ -0.76
HERC1-202ENST00000558324 OR6X1Q8NH79 312 aa10.32□□□□□ -0.76
HERC1-202ENST00000558324 ZNF566Q969W8 418 aa10.32□□□□□ -0.76
HERC1-202ENST00000558324 TNFRSF13CQ96RJ3 184 aa10.32□□□□□ -0.76
HERC1-202ENST00000558324 SLC19A3Q9BZV2 496 aa10.32□□□□□ -0.76
HERC1-202ENST00000558324 ZNF442Q9H7R0 627 aa10.32□□□□□ -0.76
HERC1-202ENST00000558324 DYNLRB1Q9NP97 96 aa10.32□□□□□ -0.76
HERC1-202ENST00000558324 B3GNT2Q9NY97 397 aa10.32□□□□□ -0.76
HERC1-202ENST00000558324 GLTPQ9NZD2 209 aa10.32□□□□□ -0.76
HERC1-202ENST00000558324 RIMS3Q9UJD0 308 aa10.32□□□□□ -0.76
HERC1-202ENST00000558324 ZANQ9Y493 2812 aa10.32□□□□□ -0.76
HERC1-202ENST00000558324 HIVEP2P31629 2446 aa10.32□□□□□ -0.76
HERC1-202ENST00000558324 CSPG4Q6UVK1 2322 aa10.32□□□□□ -0.76
HERC1-202ENST00000558324 PLCE1Q9P212 2302 aa10.32□□□□□ -0.76
HERC1-202ENST00000558324 MCIDASD6RGH6 385 aa10.31□□□□□ -0.76
HERC1-202ENST00000558324 PIP5K1CO60331 668 aa10.31□□□□□ -0.76
HERC1-202ENST00000558324 OR5F1O95221 314 aa10.31□□□□□ -0.76
HERC1-202ENST00000558324 RAB36O95755 333 aa10.31□□□□□ -0.76
HERC1-202ENST00000558324 BCL10O95999 233 aa10.31□□□□□ -0.76
HERC1-202ENST00000558324 MT-ND1P03886 318 aa10.31□□□□□ -0.76
HERC1-202ENST00000558324 ZNF16P17020 682 aaPredicted RBP10.31□□□□□ -0.76
HERC1-202ENST00000558324 PDLIM4P50479 330 aa10.31□□□□□ -0.76
HERC1-202ENST00000558324 RAB1AP62820 205 aa10.31□□□□□ -0.76
HERC1-202ENST00000558324 RPL18Q07020 188 aaKnown RBP10.31□□□□□ -0.76
HERC1-202ENST00000558324 LOXL1Q08397 574 aaPredicted RBP10.31□□□□□ -0.76
HERC1-202ENST00000558324 ZP4Q12836 540 aa10.31□□□□□ -0.76
HERC1-202ENST00000558324 MICU2Q8IYU8 434 aa10.31□□□□□ -0.76
HERC1-202ENST00000558324 TMEM239Q8WW34 195 aa10.31□□□□□ -0.76
HERC1-202ENST00000558324 TMEM54Q969K7 222 aa10.31□□□□□ -0.76
HERC1-202ENST00000558324 SGTBQ96EQ0 304 aa10.31□□□□□ -0.76
HERC1-202ENST00000558324 SLC25A44Q96H78 314 aaPredicted RBP10.31□□□□□ -0.76
HERC1-202ENST00000558324 PIMREGQ9BSJ6 248 aa10.31□□□□□ -0.76
HERC1-202ENST00000558324 PLK3Q9H4B4 646 aa10.31□□□□□ -0.76
HERC1-202ENST00000558324 CCDC134Q9H6E4 229 aa10.31□□□□□ -0.76
HERC1-202ENST00000558324 C20orf141Q9NUB4 165 aa10.31□□□□□ -0.76
HERC1-202ENST00000558324 ZNF224Q9NZL3 707 aa10.31□□□□□ -0.76
HERC1-202ENST00000558324 TLN2Q9Y4G6 2542 aa10.3□□□□□ -0.76
HERC1-202ENST00000558324 A0A1W2PRG6 482 aa10.3□□□□□ -0.76
HERC1-202ENST00000558324 ELOVL7A1L3X0 281 aa10.3□□□□□ -0.76
HERC1-202ENST00000558324 A8MV72 311 aaPredicted RBP10.3□□□□□ -0.76
HERC1-202ENST00000558324 VSTM5A8MXK1 200 aa10.3□□□□□ -0.76
HERC1-202ENST00000558324 OR7A10O76100 309 aa10.3□□□□□ -0.76
HERC1-202ENST00000558324 UBL3O95164 117 aa10.3□□□□□ -0.76
HERC1-202ENST00000558324 QDPRP09417 244 aa10.3□□□□□ -0.76
HERC1-202ENST00000558324 PGA4P0DJD7 388 aa10.3□□□□□ -0.76
HERC1-202ENST00000558324 PGA3P0DJD8 388 aa10.3□□□□□ -0.76
HERC1-202ENST00000558324 ZNF14P17017 642 aaPredicted RBP10.3□□□□□ -0.76
HERC1-202ENST00000558324 FUT1P19526 365 aa10.3□□□□□ -0.76
HERC1-202ENST00000558324 USF1P22415 310 aaPredicted RBP10.3□□□□□ -0.76
HERC1-202ENST00000558324 KDELR2P33947 212 aa10.3□□□□□ -0.76
HERC1-202ENST00000558324 MDH1P40925 334 aaKnown RBP10.3□□□□□ -0.76
HERC1-202ENST00000558324 AQP2P41181 271 aa10.3□□□□□ -0.76
HERC1-202ENST00000558324 YAP1P46937 504 aaKnown RBP10.3□□□□□ -0.76
HERC1-202ENST00000558324 PPOXP50336 477 aa10.3□□□□□ -0.76
HERC1-202ENST00000558324 CLRN1P58418 232 aa10.3□□□□□ -0.76
HERC1-202ENST00000558324 MYBPC1Q00872 1141 aa10.3□□□□□ -0.76
HERC1-202ENST00000558324 RUNX1T1Q06455 604 aa10.3□□□□□ -0.76
HERC1-202ENST00000558324 RAB39AQ14964 217 aa10.3□□□□□ -0.76
HERC1-202ENST00000558324 C6orf52Q5T4I8 152 aa10.3□□□□□ -0.76
HERC1-202ENST00000558324 GKAP1Q5VSY0 366 aaPredicted RBP10.3□□□□□ -0.76
HERC1-202ENST00000558324 ZNF627Q7L945 461 aa10.3□□□□□ -0.76
HERC1-202ENST00000558324 MEX3DQ86XN8 651 aaKnown RBP10.3□□□□□ -0.76
HERC1-202ENST00000558324 SKA3Q8IX90 412 aa10.3□□□□□ -0.76
HERC1-202ENST00000558324 CDK20Q8IZL9 346 aa10.3□□□□□ -0.76
HERC1-202ENST00000558324 SLC22A24Q8N4F4 322 aa10.3□□□□□ -0.76
HERC1-202ENST00000558324 SYT14Q8NB59 555 aa10.3□□□□□ -0.76
HERC1-202ENST00000558324 NOXO1Q8NFA2 376 aa10.3□□□□□ -0.76
HERC1-202ENST00000558324 IL17RDQ8NFM7 739 aa10.3□□□□□ -0.76
HERC1-202ENST00000558324 MOSPD2Q8NHP6 518 aa10.3□□□□□ -0.76
HERC1-202ENST00000558324 FGFBP3Q8TAT2 258 aa10.3□□□□□ -0.76
HERC1-202ENST00000558324 FOXN4Q96NZ1 517 aa10.3□□□□□ -0.76
HERC1-202ENST00000558324 ZNF347Q96SE7 839 aa10.3□□□□□ -0.76
HERC1-202ENST00000558324 SH3GL3Q99963 347 aa10.3□□□□□ -0.76
HERC1-202ENST00000558324 RAB1BQ9H0U4 201 aa10.3□□□□□ -0.76
HERC1-202ENST00000558324 TPK1Q9H3S4 243 aa10.3□□□□□ -0.76
HERC1-202ENST00000558324 TMEM38BQ9NVV0 291 aa10.3□□□□□ -0.76
HERC1-202ENST00000558324 CMTM6Q9NX76 183 aa10.3□□□□□ -0.76
HERC1-202ENST00000558324 RHCGQ9UBD6 479 aa10.3□□□□□ -0.76
HERC1-202ENST00000558324 FZR1Q9UM11 496 aa10.3□□□□□ -0.76
HERC1-202ENST00000558324 MED31Q9Y3C7 131 aa10.3□□□□□ -0.76
HERC1-202ENST00000558324 HEATR1Q9H583 2144 aaKnown RBP10.3□□□□□ -0.76
HERC1-202ENST00000558324 TMEM129A0AVI4 362 aa10.29□□□□□ -0.76
HERC1-202ENST00000558324 SLC22A2O15244 555 aa10.29□□□□□ -0.76
HERC1-202ENST00000558324 DHHO43323 396 aa10.29□□□□□ -0.76
HERC1-202ENST00000558324 ZNF682O95780 498 aa10.29□□□□□ -0.76
HERC1-202ENST00000558324 IGHG1P01857 330 aa10.29□□□□□ -0.76
HERC1-202ENST00000558324 ERCC1P07992 297 aaPredicted RBP10.29□□□□□ -0.76
HERC1-202ENST00000558324 OR8G3PP0DMU2 310 aa10.29□□□□□ -0.76
HERC1-202ENST00000558324 COX4I1P13073 169 aa10.29□□□□□ -0.76
HERC1-202ENST00000558324 NR4A1P22736 598 aa10.29□□□□□ -0.76
HERC1-202ENST00000558324 RBM34P42696 430 aaKnown RBP10.29□□□□□ -0.76
HERC1-202ENST00000558324 NR4A2P43354 598 aa10.29□□□□□ -0.76
HERC1-202ENST00000558324 SLC7A2P52569 658 aa10.29□□□□□ -0.76
HERC1-202ENST00000558324 LSM11P83369 360 aaKnown RBP eCLIP10.29□□□□□ -0.76
HERC1-202ENST00000558324 VLDLRP98155 873 aa10.29□□□□□ -0.76
HERC1-202ENST00000558324 GALK2Q01415 458 aa10.29□□□□□ -0.76
HERC1-202ENST00000558324 LIPEQ05469 1076 aa10.29□□□□□ -0.76
HERC1-202ENST00000558324 TOP3AQ13472 1001 aaPredicted RBP10.29□□□□□ -0.76
HERC1-202ENST00000558324 MSMPQ1L6U9 139 aa10.29□□□□□ -0.76
HERC1-202ENST00000558324 IQCCQ4KMZ1 466 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms