RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 GNG10P50151 68 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 CCNG1P51959 295 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 CDH6P55285 790 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 PRPS1P60891 318 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 OSTNP61366 133 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 YWHAGP61981 247 aaKnown RBP eCLIP2.15□□□□□ -2.07
SPG11-206ENST00000558093 PSMC5P62195 406 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 VLDLRP98155 873 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 CYP24A1Q07973 514 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 IFFO1Q0D2I5 559 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 SMARCB1Q12824 385 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 STX3Q13277 289 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 ALX1Q15699 326 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 LRRC36Q1X8D7 754 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 XKR7Q5GH72 579 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 TFDP3Q5H9I0 405 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 CTRB2Q6GPI1 263 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 PYHIN1Q6K0P9 492 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 RNASEKQ6P5S7 137 aaKnown RBP2.15□□□□□ -2.07
SPG11-206ENST00000558093 TTC33Q6PID6 262 aaPredicted RBP2.15□□□□□ -2.07
SPG11-206ENST00000558093 WASH2PQ6VEQ5 465 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 HSDL2Q6YN16 418 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 FAM122BQ7Z309 247 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 SERPINA9Q86WD7 417 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 PAQR7Q86WK9 346 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 RBM45Q8IUH3 476 aaKnown RBP2.15□□□□□ -2.07
SPG11-206ENST00000558093 NUDCD3Q8IVD9 361 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 CCDC50Q8IVM0 306 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 ZNF786Q8N393 782 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 TBC1D19Q8N5T2 526 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 TTC29Q8NA56 475 aaPredicted RBP2.15□□□□□ -2.07
SPG11-206ENST00000558093 ZSCAN4Q8NAM6 433 aaPredicted RBP2.15□□□□□ -2.07
SPG11-206ENST00000558093 CYB561A3Q8NBI2 242 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 OR5T1Q8NG75 326 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 OR2T33Q8NG76 320 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 OR5M1Q8NGP8 315 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 OR13C9Q8NGT0 318 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 OR2A12Q8NGT7 310 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 RHEBL1Q8TAI7 183 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 TRMT10AQ8TBZ6 339 aaKnown RBP2.15□□□□□ -2.07
SPG11-206ENST00000558093 ARNTL2Q8WYA1 636 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 EMG1Q92979 244 aaKnown RBP2.15□□□□□ -2.07
SPG11-206ENST00000558093 FAM104AQ969W3 186 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 CIDECQ96AQ7 238 aaPredicted RBP2.15□□□□□ -2.07
SPG11-206ENST00000558093 SLC25A36Q96CQ1 311 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 STARD4Q96DR4 205 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 ASB9Q96DX5 294 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 TMA16Q96EY4 203 aaKnown RBP2.15□□□□□ -2.07
SPG11-206ENST00000558093 SDSLQ96GA7 329 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 PLEKHA8Q96JA3 519 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 CENPKQ9BS16 269 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 NAT9Q9BTE0 207 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 TRIM4Q9C037 500 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 IL22Q9GZX6 179 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 RAB1BQ9H0U4 201 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 OR51V1Q9H2C8 321 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 SAV1Q9H4B6 383 aaPredicted RBP2.15□□□□□ -2.07
SPG11-206ENST00000558093 CAB39LQ9H9S4 337 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 CCNB1IP1Q9NPC3 277 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 DMAP1Q9NPF5 467 aaPredicted RBP2.15□□□□□ -2.07
SPG11-206ENST00000558093 RRAGDQ9NQL2 400 aaPredicted RBP2.15□□□□□ -2.07
SPG11-206ENST00000558093 RHBDL2Q9NX52 303 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 SLC2A8Q9NY64 477 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 WARS2Q9UGM6 360 aaKnown RBP2.15□□□□□ -2.07
SPG11-206ENST00000558093 LCMT1Q9UIC8 334 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 CDH9Q9ULB4 789 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 RPH3ALQ9UNE2 315 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 PSMD13Q9UNM6 376 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 EIF3LQ9Y262 564 aaKnown RBP2.15□□□□□ -2.07
SPG11-206ENST00000558093 AP3M1Q9Y2T2 418 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 SAMHD1Q9Y3Z3 626 aaKnown RBP2.15□□□□□ -2.07
SPG11-206ENST00000558093 OR10H1Q9Y4A9 318 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 SLCO1B1Q9Y6L6 691 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 FHAD1B1AJZ9 1412 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 FHOD3Q2V2M9 1422 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 NCOA3Q9Y6Q9 1424 aa2.15□□□□□ -2.07
SPG11-206ENST00000558093 POLR3AO14802 1390 aaPredicted RBP2.14□□□□□ -2.07
SPG11-206ENST00000558093 A0A0J9YXY3 114 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 A0A1B0GVL5 298 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 GSTTP1A0A1W2PQM5 241 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 SMCO2A6NFE2 343 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 PCP4L1A6NKN8 68 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 PRAMEF26H0Y7S4 382 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 K7ENP7 123 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 BCAS1O75363 584 aaPredicted RBP2.14□□□□□ -2.07
SPG11-206ENST00000558093 SUPT7LO94864 414 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 RPP14O95059 124 aaKnown RBP2.14□□□□□ -2.07
SPG11-206ENST00000558093 AHSA1O95433 338 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 TIMP1P01033 207 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 FABP1P07148 127 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 ERCC1P07992 297 aaPredicted RBP2.14□□□□□ -2.07
SPG11-206ENST00000558093 PLEKP08567 350 aaPredicted RBP2.14□□□□□ -2.07
SPG11-206ENST00000558093 KRT7P08729 469 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 CD3GP09693 182 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 RD3LP0DJH9 198 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 CALM1P0DP23 149 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 CALM2P0DP24 149 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 CALM3P0DP25 149 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 MCF2P10911 925 aa2.14□□□□□ -2.07
SPG11-206ENST00000558093 BCKDHAP12694 445 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms