RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 FRZBQ92765 325 aa10.09□□□□□ -0.79
SEMA4B-204ENST00000558065 RNFT2Q96EX2 444 aa10.09□□□□□ -0.79
SEMA4B-204ENST00000558065 C12orf42Q96LP6 360 aa10.09□□□□□ -0.79
SEMA4B-204ENST00000558065 OR5B2Q96R09 309 aa10.09□□□□□ -0.79
SEMA4B-204ENST00000558065 OR8B4Q96RC9 309 aa10.09□□□□□ -0.79
SEMA4B-204ENST00000558065 COPS8Q99627 209 aa10.09□□□□□ -0.79
SEMA4B-204ENST00000558065 DUSP16Q9BY84 665 aa10.09□□□□□ -0.79
SEMA4B-204ENST00000558065 RAB33BQ9H082 229 aa10.09□□□□□ -0.79
SEMA4B-204ENST00000558065 CLMPQ9H6B4 373 aa10.09□□□□□ -0.79
SEMA4B-204ENST00000558065 CACNG4Q9UBN1 327 aa10.09□□□□□ -0.79
SEMA4B-204ENST00000558065 NUP98P52948 1817 aa10.09□□□□□ -0.79
SEMA4B-204ENST00000558065 ELOA3DA6NLF2 546 aaPredicted RBP10.09□□□□□ -0.79
SEMA4B-204ENST00000558065 TBX18O95935 607 aa10.09□□□□□ -0.79
SEMA4B-204ENST00000558065 CHRM4P08173 479 aa10.09□□□□□ -0.79
SEMA4B-204ENST00000558065 LIMS3P0CW19 117 aa10.09□□□□□ -0.79
SEMA4B-204ENST00000558065 LIMS4P0CW20 117 aa10.09□□□□□ -0.79
SEMA4B-204ENST00000558065 ADORA2BP29275 332 aa10.09□□□□□ -0.79
SEMA4B-204ENST00000558065 DLSTP36957 453 aa10.09□□□□□ -0.79
SEMA4B-204ENST00000558065 NBPF12Q5TAG4 269 aaPredicted RBP10.09□□□□□ -0.79
SEMA4B-204ENST00000558065 RTL6Q6ICC9 239 aa10.09□□□□□ -0.79
SEMA4B-204ENST00000558065 LINC01551Q86U37 167 aa10.09□□□□□ -0.79
SEMA4B-204ENST00000558065 OR4D9Q8NGE8 314 aa10.09□□□□□ -0.79
SEMA4B-204ENST00000558065 Q8WTZ3 238 aa10.09□□□□□ -0.79
SEMA4B-204ENST00000558065 GHSRQ92847 366 aa10.09□□□□□ -0.79
SEMA4B-204ENST00000558065 SLC25A38Q96DW6 304 aa10.09□□□□□ -0.79
SEMA4B-204ENST00000558065 OR52E6Q96RD3 313 aa10.09□□□□□ -0.79
SEMA4B-204ENST00000558065 TPSD1Q9BZJ3 242 aa10.09□□□□□ -0.79
SEMA4B-204ENST00000558065 ADAP2Q9NPF8 381 aa10.09□□□□□ -0.79
SEMA4B-204ENST00000558065 CAMK2AQ9UQM7 478 aa10.09□□□□□ -0.79
SEMA4B-204ENST00000558065 WIF1Q9Y5W5 379 aa10.09□□□□□ -0.79
SEMA4B-204ENST00000558065 TSC2P49815 1807 aa10.09□□□□□ -0.79
SEMA4B-204ENST00000558065 XRCC3O43542 346 aa10.09□□□□□ -0.79
SEMA4B-204ENST00000558065 SCGNO76038 276 aa10.09□□□□□ -0.79
SEMA4B-204ENST00000558065 TK1P04183 234 aa10.09□□□□□ -0.79
SEMA4B-204ENST00000558065 UMODP07911 640 aa10.09□□□□□ -0.79
SEMA4B-204ENST00000558065 RPE65Q16518 533 aa10.09□□□□□ -0.79
SEMA4B-204ENST00000558065 DUSP5Q16690 384 aa10.09□□□□□ -0.79
SEMA4B-204ENST00000558065 SLC25A35Q3KQZ1 300 aa10.09□□□□□ -0.79
SEMA4B-204ENST00000558065 COL5A1-AS1Q5SY13 56 aa10.09□□□□□ -0.79
SEMA4B-204ENST00000558065 BHLHA15Q7RTS1 189 aaPredicted RBP10.09□□□□□ -0.79
SEMA4B-204ENST00000558065 OR2D3Q8NGH3 330 aa10.09□□□□□ -0.79
SEMA4B-204ENST00000558065 LINC01599Q8WXQ3 324 aa10.09□□□□□ -0.79
SEMA4B-204ENST00000558065 TOMM40LQ969M1 308 aa10.09□□□□□ -0.79
SEMA4B-204ENST00000558065 SPACA9Q96E40 222 aaPredicted RBP10.09□□□□□ -0.79
SEMA4B-204ENST00000558065 ZNF302Q9NR11 478 aa10.09□□□□□ -0.79
SEMA4B-204ENST00000558065 SLC2A8Q9NY64 477 aa10.09□□□□□ -0.79
SEMA4B-204ENST00000558065 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 PRAMEF25A6NGN4 478 aa10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 OR5H14A6NHG9 310 aa10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 AQP7O14520 342 aa10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 SPINT1O43278 529 aa10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 NUDT21O43809 227 aaKnown RBP10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 TOMM40O96008 361 aa10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 GASTP01350 101 aa10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 OR2T7P0C7T2 308 aa10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 TNFRSF1BP20333 461 aa10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 ZNF41P51814 821 aaPredicted RBP10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 SLC10A7Q0GE19 358 aa10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 SLAQ13239 276 aa10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 KHDRBS2Q5VWX1 349 aaKnown RBP10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 TNFAIP8L2Q6P589 184 aaPredicted RBP10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 IGF2-ASQ6U949 168 aa10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 ZNF705AQ6ZN79 300 aaPredicted RBP10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 CATSPERDQ86XM0 798 aa10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 GKN2Q86XP6 184 aa10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 SIDT2Q8NBJ9 832 aaKnown RBP10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 AGBL5Q8NDL9 886 aa10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 OR4K2Q8NGD2 314 aa10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 ORAI3Q9BRQ5 295 aa10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 MED10Q9BTT4 135 aa10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 RIOK2Q9BVS4 552 aaKnown RBP10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 MKKSQ9NPJ1 570 aaPredicted RBP10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 OR52A1Q9UKL2 312 aa10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 POLR3KQ9Y2Y1 108 aaPredicted RBP10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 PRSS21Q9Y6M0 314 aa10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 SCDO00767 359 aa10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 CYB5BO43169 146 aa10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 LCATP04180 440 aa10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 RABIFP47224 123 aa10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 SPIBQ01892 262 aa10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 ELOBQ15370 118 aa10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 GUK1Q16774 197 aa10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 GOLGA7BQ2TAP0 167 aa10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 IZUMO1Q8IYV9 350 aa10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 CPT1CQ8TCG5 803 aa10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 CD200R1Q8TD46 325 aa10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 CASTOR1Q8WTX7 329 aa10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 GPR21Q99679 349 aa10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 KLHDC3Q9BQ90 382 aa10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 MRPL13Q9BYD1 178 aaKnown RBP10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 RGCCQ9H4X1 137 aa10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 CXorf36Q9H7Y0 433 aa10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 GPATCH2Q9NW75 528 aa10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 SLC23A2Q9UGH3 650 aa10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 INSL6Q9Y581 213 aa10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 A0A1W2PR48 441 aa10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 C17orf105B2RV13 164 aa10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 WNT10BO00744 389 aa10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 SLCO2B1O94956 709 aa10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 CELP19835 753 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms