RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 SLC22A23A1A5C7 686 aa18.25■□□□□ 0.51
SNRPA1-205ENST00000558036 AQP7P3A6NL99 342 aa18.25■□□□□ 0.51
SNRPA1-205ENST00000558036 SLC16A7O60669 478 aa18.25■□□□□ 0.51
SNRPA1-205ENST00000558036 DAP3P51398 398 aaKnown RBP18.25■□□□□ 0.51
SNRPA1-205ENST00000558036 SUCLG1P53597 346 aaKnown RBP18.25■□□□□ 0.51
SNRPA1-205ENST00000558036 BIDP55957 195 aa18.25■□□□□ 0.51
SNRPA1-205ENST00000558036 GFRA1P56159 465 aa18.25■□□□□ 0.51
SNRPA1-205ENST00000558036 RPS3AP61247 264 aaKnown RBP18.25■□□□□ 0.51
SNRPA1-205ENST00000558036 NCS1P62166 190 aa18.25■□□□□ 0.51
SNRPA1-205ENST00000558036 ZNF85Q03923 595 aa18.25■□□□□ 0.51
SNRPA1-205ENST00000558036 FMODQ06828 376 aa18.25■□□□□ 0.51
SNRPA1-205ENST00000558036 GGTLC2Q14390 218 aa18.25■□□□□ 0.51
SNRPA1-205ENST00000558036 SPCS2Q15005 226 aa18.25■□□□□ 0.51
SNRPA1-205ENST00000558036 ZNF766Q5HY98 468 aa18.25■□□□□ 0.51
SNRPA1-205ENST00000558036 SLC35D3Q5M8T2 416 aa18.25■□□□□ 0.51
SNRPA1-205ENST00000558036 UEVLDQ8IX04 471 aa18.25■□□□□ 0.51
SNRPA1-205ENST00000558036 KLHL36Q8N4N3 616 aa18.25■□□□□ 0.51
SNRPA1-205ENST00000558036 OR2T4Q8NH00 348 aa18.25■□□□□ 0.51
SNRPA1-205ENST00000558036 JAM3Q9BX67 310 aa18.25■□□□□ 0.51
SNRPA1-205ENST00000558036 CTLA4P16410 223 aa18.24■□□□□ 0.51
SNRPA1-205ENST00000558036 CD97P48960 835 aa18.24■□□□□ 0.51
SNRPA1-205ENST00000558036 TNFSF10P50591 281 aa18.24■□□□□ 0.51
SNRPA1-205ENST00000558036 H3F3AP84243 136 aa18.24■□□□□ 0.51
SNRPA1-205ENST00000558036 POU4F2Q12837 409 aa18.24■□□□□ 0.51
SNRPA1-205ENST00000558036 EEF1A1P5Q5VTE0 462 aa18.24■□□□□ 0.51
SNRPA1-205ENST00000558036 ZNF322Q6U7Q0 402 aaPredicted RBP18.24■□□□□ 0.51
SNRPA1-205ENST00000558036 NHLRC1Q6VVB1 395 aa18.24■□□□□ 0.51
SNRPA1-205ENST00000558036 ATCAYQ86WG3 371 aa18.24■□□□□ 0.51
SNRPA1-205ENST00000558036 RNF32Q9H0A6 362 aa18.24■□□□□ 0.51
SNRPA1-205ENST00000558036 CCDC86Q9H6F5 360 aaKnown RBP18.24■□□□□ 0.51
SNRPA1-205ENST00000558036 MRPS18CQ9Y3D5 142 aaKnown RBP18.24■□□□□ 0.51
SNRPA1-205ENST00000558036 KLRC4-KLRK1H3BQV0 150 aa18.23■□□□□ 0.51
SNRPA1-205ENST00000558036 CCRL2O00421 344 aa18.23■□□□□ 0.51
SNRPA1-205ENST00000558036 POU3F2P20265 443 aaPredicted RBP18.23■□□□□ 0.51
SNRPA1-205ENST00000558036 ENPP1P22413 925 aa18.23■□□□□ 0.51
SNRPA1-205ENST00000558036 RPS27P42677 84 aaKnown RBP18.23■□□□□ 0.51
SNRPA1-205ENST00000558036 CENPAP49450 140 aa18.23■□□□□ 0.51
SNRPA1-205ENST00000558036 CLDN15P56746 228 aa18.23■□□□□ 0.51
SNRPA1-205ENST00000558036 MLLT11Q13015 90 aaPredicted RBP18.23■□□□□ 0.51
SNRPA1-205ENST00000558036 CRTC2Q53ET0 693 aaPredicted RBP18.23■□□□□ 0.51
SNRPA1-205ENST00000558036 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.23■□□□□ 0.51
SNRPA1-205ENST00000558036 ERI1Q8IV48 349 aaKnown RBP18.23■□□□□ 0.51
SNRPA1-205ENST00000558036 SLC35F2Q8IXU6 374 aa18.23■□□□□ 0.51
SNRPA1-205ENST00000558036 ADPRHL1Q8NDY3 354 aa18.23■□□□□ 0.51
SNRPA1-205ENST00000558036 ARHGAP9Q9BRR9 750 aa18.23■□□□□ 0.51
SNRPA1-205ENST00000558036 RACGAP1Q9H0H5 632 aa18.23■□□□□ 0.51
SNRPA1-205ENST00000558036 SLC6A15Q9H2J7 730 aa18.23■□□□□ 0.51
SNRPA1-205ENST00000558036 FANCFQ9NPI8 374 aa18.23■□□□□ 0.51
SNRPA1-205ENST00000558036 PTTG2Q9NZH5 202 aa18.23■□□□□ 0.51
SNRPA1-205ENST00000558036 VSX1Q9NZR4 365 aaPredicted RBP18.23■□□□□ 0.51
SNRPA1-205ENST00000558036 COPS3Q9UNS2 423 aa18.23■□□□□ 0.51
SNRPA1-205ENST00000558036 B9D1Q9UPM9 204 aa18.23■□□□□ 0.51
SNRPA1-205ENST00000558036 LOC100506127A0A0U1RQW1 187 aa18.23■□□□□ 0.51
SNRPA1-205ENST00000558036 TRAF3IP2O43734 574 aaPredicted RBP18.23■□□□□ 0.51
SNRPA1-205ENST00000558036 HPNP05981 417 aa18.23■□□□□ 0.51
SNRPA1-205ENST00000558036 GALEQ14376 348 aa18.23■□□□□ 0.51
SNRPA1-205ENST00000558036 KLBQ86Z14 1044 aa18.23■□□□□ 0.51
SNRPA1-205ENST00000558036 POMGNT2Q8NAT1 580 aa18.23■□□□□ 0.51
SNRPA1-205ENST00000558036 RNF167Q9H6Y7 350 aa18.23■□□□□ 0.51
SNRPA1-205ENST00000558036 WDR76Q9H967 626 aa18.23■□□□□ 0.51
SNRPA1-205ENST00000558036 NOX1Q9Y5S8 564 aa18.23■□□□□ 0.51
SNRPA1-205ENST00000558036 ATMQ13315 3056 aa18.22■□□□□ 0.51
SNRPA1-205ENST00000558036 GJE1A6NN92 205 aa18.22■□□□□ 0.51
SNRPA1-205ENST00000558036 AIREO43918 545 aa18.22■□□□□ 0.51
SNRPA1-205ENST00000558036 GLSO94925 669 aaPredicted RBP18.22■□□□□ 0.51
SNRPA1-205ENST00000558036 ZNF182P17025 639 aaPredicted RBP18.22■□□□□ 0.51
SNRPA1-205ENST00000558036 PPIAP62937 165 aaKnown RBP18.22■□□□□ 0.51
SNRPA1-205ENST00000558036 CSNK2A1P68400 391 aaPredicted RBP18.22■□□□□ 0.51
SNRPA1-205ENST00000558036 PMP22Q01453 160 aa18.22■□□□□ 0.51
SNRPA1-205ENST00000558036 NDNFQ8TB73 568 aa18.22■□□□□ 0.51
SNRPA1-205ENST00000558036 SCMH1Q96GD3 660 aa18.22■□□□□ 0.51
SNRPA1-205ENST00000558036 TSC22D3Q99576 134 aa18.22■□□□□ 0.51
SNRPA1-205ENST00000558036 CHCHD6Q9BRQ6 235 aa18.22■□□□□ 0.51
SNRPA1-205ENST00000558036 MOKQ9UQ07 419 aa18.22■□□□□ 0.51
SNRPA1-205ENST00000558036 IGKV1D-43A0A0B4J1Z2 117 aa18.22■□□□□ 0.51
SNRPA1-205ENST00000558036 ITGB2P05107 769 aa18.22■□□□□ 0.51
SNRPA1-205ENST00000558036 ZNF43P17038 809 aa18.22■□□□□ 0.51
SNRPA1-205ENST00000558036 EIF1AXP47813 144 aaKnown RBP18.22■□□□□ 0.51
SNRPA1-205ENST00000558036 OR12D2P58182 307 aa18.22■□□□□ 0.51
SNRPA1-205ENST00000558036 NFATC3Q12968 1075 aa18.22■□□□□ 0.51
SNRPA1-205ENST00000558036 CAMK2DQ13557 499 aa18.22■□□□□ 0.51
SNRPA1-205ENST00000558036 RNFT1Q5M7Z0 435 aa18.22■□□□□ 0.51
SNRPA1-205ENST00000558036 CARD17Q5XLA6 110 aa18.22■□□□□ 0.51
SNRPA1-205ENST00000558036 HBMQ6B0K9 141 aa18.22■□□□□ 0.51
SNRPA1-205ENST00000558036 PHC2Q8IXK0 858 aa18.22■□□□□ 0.51
SNRPA1-205ENST00000558036 OR52N1Q8NH53 320 aa18.22■□□□□ 0.51
SNRPA1-205ENST00000558036 TMEM203Q969S6 136 aa18.22■□□□□ 0.51
SNRPA1-205ENST00000558036 C4orf36Q96KX1 117 aa18.22■□□□□ 0.51
SNRPA1-205ENST00000558036 OXGR1Q96P68 337 aa18.22■□□□□ 0.51
SNRPA1-205ENST00000558036 KCNK17Q96T54 332 aa18.22■□□□□ 0.51
SNRPA1-205ENST00000558036 CAB39Q9Y376 341 aaPredicted RBP18.22■□□□□ 0.51
SNRPA1-205ENST00000558036 APC2O95996 2303 aa18.21■□□□□ 0.51
SNRPA1-205ENST00000558036 IGLV1-36A0A0B4J1U3 117 aa18.21■□□□□ 0.51
SNRPA1-205ENST00000558036 SLC35F4A4IF30 521 aa18.21■□□□□ 0.51
SNRPA1-205ENST00000558036 HLA-DQA2P01906 255 aa18.21■□□□□ 0.51
SNRPA1-205ENST00000558036 CARD18P57730 90 aa18.21■□□□□ 0.51
SNRPA1-205ENST00000558036 ZBTB46Q86UZ6 589 aa18.21■□□□□ 0.51
SNRPA1-205ENST00000558036 TIGD4Q8IY51 512 aa18.21■□□□□ 0.51
SNRPA1-205ENST00000558036 ZFP62Q8NB50 900 aaPredicted RBP18.21■□□□□ 0.51
SNRPA1-205ENST00000558036 ING1Q9UK53 422 aaPredicted RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms