RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 SIGLEC12Q96PQ1 595 aa11.18□□□□□ -0.62
SHMT2-233ENST00000557529 TIMP4Q99727 224 aa11.18□□□□□ -0.62
SHMT2-233ENST00000557529 CENPOQ9BU64 300 aa11.18□□□□□ -0.62
SHMT2-233ENST00000557529 MARCH7Q9H992 704 aa11.18□□□□□ -0.62
SHMT2-233ENST00000557529 ISG20L2Q9H9L3 353 aaKnown RBP11.18□□□□□ -0.62
SHMT2-233ENST00000557529 B3GAT1Q9P2W7 334 aa11.18□□□□□ -0.62
SHMT2-233ENST00000557529 POLHQ9Y253 713 aa11.18□□□□□ -0.62
SHMT2-233ENST00000557529 KLF13Q9Y2Y9 288 aaPredicted RBP11.18□□□□□ -0.62
SHMT2-233ENST00000557529 TMEM14AQ9Y6G1 99 aa11.18□□□□□ -0.62
SHMT2-233ENST00000557529 CNOT1A5YKK6 2376 aaKnown RBP11.18□□□□□ -0.62
SHMT2-233ENST00000557529 GVINP1Q7Z2Y8 2422 aa11.18□□□□□ -0.62
SHMT2-233ENST00000557529 SPEGQ15772 3267 aa11.18□□□□□ -0.62
SHMT2-233ENST00000557529 DOCK10Q96BY6 2186 aa11.18□□□□□ -0.62
SHMT2-233ENST00000557529 PINLYPA6NC86 204 aa11.17□□□□□ -0.62
SHMT2-233ENST00000557529 VGLL3A8MV65 326 aa11.17□□□□□ -0.62
SHMT2-233ENST00000557529 FAM171A2A8MVW0 826 aa11.17□□□□□ -0.62
SHMT2-233ENST00000557529 KLRC4-KLRK1H3BQV0 150 aa11.17□□□□□ -0.62
SHMT2-233ENST00000557529 J3QLW9 94 aa11.17□□□□□ -0.62
SHMT2-233ENST00000557529 DCTN6O00399 190 aa11.17□□□□□ -0.62
SHMT2-233ENST00000557529 PHYHO14832 338 aa11.17□□□□□ -0.62
SHMT2-233ENST00000557529 NME2P1O60361 137 aa11.17□□□□□ -0.62
SHMT2-233ENST00000557529 SLC16A7O60669 478 aa11.17□□□□□ -0.62
SHMT2-233ENST00000557529 TRAPPC6AO75865 159 aa11.17□□□□□ -0.62
SHMT2-233ENST00000557529 CLPXO76031 633 aa11.17□□□□□ -0.62
SHMT2-233ENST00000557529 VAMP5O95183 116 aa11.17□□□□□ -0.62
SHMT2-233ENST00000557529 LALBAP00709 142 aa11.17□□□□□ -0.62
SHMT2-233ENST00000557529 HLA-DPB1P04440 258 aa11.17□□□□□ -0.62
SHMT2-233ENST00000557529 SP1P08047 785 aa11.17□□□□□ -0.62
SHMT2-233ENST00000557529 RFPL3SP0C7P2 107 aa11.17□□□□□ -0.62
SHMT2-233ENST00000557529 PRKAR1AP10644 381 aa11.17□□□□□ -0.62
SHMT2-233ENST00000557529 CD46P15529 392 aa11.17□□□□□ -0.62
SHMT2-233ENST00000557529 ZNF19P17023 458 aa11.17□□□□□ -0.62
SHMT2-233ENST00000557529 CELP19835 753 aa11.17□□□□□ -0.62
SHMT2-233ENST00000557529 NME2P22392 152 aa11.17□□□□□ -0.62
SHMT2-233ENST00000557529 GALP22466 123 aa11.17□□□□□ -0.62
SHMT2-233ENST00000557529 GBX2P52951 348 aaPredicted RBP11.17□□□□□ -0.62
SHMT2-233ENST00000557529 NHLH1Q02575 133 aa11.17□□□□□ -0.62
SHMT2-233ENST00000557529 C19orf57Q0VDD7 668 aa11.17□□□□□ -0.62
SHMT2-233ENST00000557529 TRAM1Q15629 374 aa11.17□□□□□ -0.62
SHMT2-233ENST00000557529 TBC1D25Q3MII6 688 aa11.17□□□□□ -0.62
SHMT2-233ENST00000557529 NHLRC1Q6VVB1 395 aa11.17□□□□□ -0.62
SHMT2-233ENST00000557529 LINC00299Q6ZSB3 139 aa11.17□□□□□ -0.62
SHMT2-233ENST00000557529 KCTD20Q7Z5Y7 419 aa11.17□□□□□ -0.62
SHMT2-233ENST00000557529 YRDCQ86U90 279 aaKnown RBP11.17□□□□□ -0.62
SHMT2-233ENST00000557529 SULF2Q8IWU5 870 aa11.17□□□□□ -0.62
SHMT2-233ENST00000557529 TIGD4Q8IY51 512 aa11.17□□□□□ -0.62
SHMT2-233ENST00000557529 HAVCR2Q8TDQ0 301 aa11.17□□□□□ -0.62
SHMT2-233ENST00000557529 ADAD1Q96M93 576 aaKnown RBP11.17□□□□□ -0.62
SHMT2-233ENST00000557529 INTS14Q96SY0 518 aa11.17□□□□□ -0.62
SHMT2-233ENST00000557529 TSPAN10Q9H1Z9 355 aaPredicted RBP11.17□□□□□ -0.62
SHMT2-233ENST00000557529 RERGLQ9H628 205 aa11.17□□□□□ -0.62
SHMT2-233ENST00000557529 SIAEQ9HAT2 523 aa11.17□□□□□ -0.62
SHMT2-233ENST00000557529 PLA2G3Q9NZ20 509 aa11.17□□□□□ -0.62
SHMT2-233ENST00000557529 SF3B6Q9Y3B4 125 aaKnown RBP11.17□□□□□ -0.62
SHMT2-233ENST00000557529 FAM186AA6NE01 2351 aa11.17□□□□□ -0.62
SHMT2-233ENST00000557529 IGLV1-36A0A0B4J1U3 117 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 TRDV1A0A1B0GX56 115 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 A6NL46 340 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 TRAF3IP2O43734 574 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-233ENST00000557529 HPNP05981 417 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 NR2C1P13056 603 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 CTLA4P16410 223 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 ZNF43P17038 809 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 AGFG1P52594 562 aaKnown RBP11.16□□□□□ -0.62
SHMT2-233ENST00000557529 BIDP55957 195 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 OR12D2P58182 307 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 RPS25P62851 125 aaKnown RBP11.16□□□□□ -0.62
SHMT2-233ENST00000557529 H3F3AP84243 136 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 GLO1Q04760 184 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 RUNX1T1Q06455 604 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 CDC20Q12834 499 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 MRPL28Q13084 256 aaKnown RBP11.16□□□□□ -0.62
SHMT2-233ENST00000557529 CLN3Q13286 438 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 POU4F3Q15319 338 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 CD200R1LQ6Q8B3 271 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 PLEKHG7Q6ZR37 379 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 ESPNLQ6ZVH7 1005 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 ASB18Q6ZVZ8 466 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 SSX6Q7RTT6 188 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 CDC20BQ86Y33 519 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 OR6X1Q8NH79 312 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 FNDC8Q8TC99 324 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 SMAP2Q8WU79 429 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-233ENST00000557529 HAS2Q92819 552 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 TXNDC15Q96J42 360 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 RBP7Q96R05 134 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 KCNK17Q96T54 332 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 ZNF703Q9H7S9 590 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-233ENST00000557529 WDR76Q9H967 626 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 MED29Q9NX70 200 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 CCDC59Q9P031 241 aaKnown RBP11.16□□□□□ -0.62
SHMT2-233ENST00000557529 KLHL13Q9P2N7 655 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 ZMIZ1Q9ULJ6 1067 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 GSTK1Q9Y2Q3 226 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 EML6Q6ZMW3 1958 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 CUL9Q8IWT3 2517 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 A0A0J9YW62 118 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 PNMA8CA0A1B0GUJ8 204 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 TRABD2BA6NFA1 517 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 TVP23AA6NH52 213 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms