RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 CYP2R1Q6VVX0 501 aa7.31□□□□□ -1.24
PSEN1-223ENST00000557511 SLC46A3Q7Z3Q1 461 aa7.31□□□□□ -1.24
PSEN1-223ENST00000557511 ZDHHC21Q8IVQ6 265 aa7.31□□□□□ -1.24
PSEN1-223ENST00000557511 C20orf196Q8IYI0 205 aa7.31□□□□□ -1.24
PSEN1-223ENST00000557511 LRRC17Q8N6Y2 441 aa7.31□□□□□ -1.24
PSEN1-223ENST00000557511 FNDC8Q8TC99 324 aa7.31□□□□□ -1.24
PSEN1-223ENST00000557511 MAGEE2Q8TD90 523 aaPredicted RBP7.31□□□□□ -1.24
PSEN1-223ENST00000557511 TMEM171Q8WVE6 324 aa7.31□□□□□ -1.24
PSEN1-223ENST00000557511 LIPHQ8WWY8 451 aa7.31□□□□□ -1.24
PSEN1-223ENST00000557511 AKAP1Q92667 903 aaKnown RBP eCLIP7.31□□□□□ -1.24
PSEN1-223ENST00000557511 FBXW5Q969U6 566 aa7.31□□□□□ -1.24
PSEN1-223ENST00000557511 CCDC124Q96CT7 223 aaKnown RBP7.31□□□□□ -1.24
PSEN1-223ENST00000557511 ASB9Q96DX5 294 aa7.31□□□□□ -1.24
PSEN1-223ENST00000557511 SLC25A44Q96H78 314 aaPredicted RBP7.31□□□□□ -1.24
PSEN1-223ENST00000557511 TXNDC15Q96J42 360 aa7.31□□□□□ -1.24
PSEN1-223ENST00000557511 RBP7Q96R05 134 aa7.31□□□□□ -1.24
PSEN1-223ENST00000557511 SEPHS2Q99611 448 aa7.31□□□□□ -1.24
PSEN1-223ENST00000557511 CCL19Q99731 98 aa7.31□□□□□ -1.24
PSEN1-223ENST00000557511 KCNN2Q9H2S1 579 aa7.31□□□□□ -1.24
PSEN1-223ENST00000557511 YY1AP1Q9H869 796 aa7.31□□□□□ -1.24
PSEN1-223ENST00000557511 GPR35Q9HC97 309 aa7.31□□□□□ -1.24
PSEN1-223ENST00000557511 MEPEQ9NQ76 525 aaPredicted RBP7.31□□□□□ -1.24
PSEN1-223ENST00000557511 GLTPQ9NZD2 209 aa7.31□□□□□ -1.24
PSEN1-223ENST00000557511 NDUFAF4Q9P032 175 aa7.31□□□□□ -1.24
PSEN1-223ENST00000557511 ANKHD1Q8IWZ3 2542 aaKnown RBP7.31□□□□□ -1.24
PSEN1-223ENST00000557511 A0A087WUU8 490 aa7.3□□□□□ -1.24
PSEN1-223ENST00000557511 A0A096LPE4 126 aa7.3□□□□□ -1.24
PSEN1-223ENST00000557511 A0A1W2PPZ6 126 aa7.3□□□□□ -1.24
PSEN1-223ENST00000557511 A6NIZ1 184 aa7.3□□□□□ -1.24
PSEN1-223ENST00000557511 CENPBD1B2RD01 187 aa7.3□□□□□ -1.24
PSEN1-223ENST00000557511 PDLIM1O00151 329 aa7.3□□□□□ -1.24
PSEN1-223ENST00000557511 ABCD4O14678 606 aa7.3□□□□□ -1.24
PSEN1-223ENST00000557511 HS3ST1O14792 307 aa7.3□□□□□ -1.24
PSEN1-223ENST00000557511 EREGO14944 169 aa7.3□□□□□ -1.24
PSEN1-223ENST00000557511 ARHGEF9O43307 516 aa7.3□□□□□ -1.24
PSEN1-223ENST00000557511 PIP5K1CO60331 668 aa7.3□□□□□ -1.24
PSEN1-223ENST00000557511 OR10H3O60404 316 aa7.3□□□□□ -1.24
PSEN1-223ENST00000557511 SMPD2O60906 423 aa7.3□□□□□ -1.24
PSEN1-223ENST00000557511 TMCC2O75069 709 aa7.3□□□□□ -1.24
PSEN1-223ENST00000557511 KRT36O76013 467 aa7.3□□□□□ -1.24
PSEN1-223ENST00000557511 PDE5AO76074 875 aa7.3□□□□□ -1.24
PSEN1-223ENST00000557511 UBOX5O94941 541 aa7.3□□□□□ -1.24
PSEN1-223ENST00000557511 RAB36O95755 333 aa7.3□□□□□ -1.24
PSEN1-223ENST00000557511 CRYAAP02489 173 aa7.3□□□□□ -1.24
PSEN1-223ENST00000557511 ART1P52961 327 aa7.3□□□□□ -1.24
PSEN1-223ENST00000557511 RAP1BP61224 184 aa7.3□□□□□ -1.24
PSEN1-223ENST00000557511 RAP1AP62834 184 aa7.3□□□□□ -1.24
PSEN1-223ENST00000557511 VLDLRP98155 873 aa7.3□□□□□ -1.24
PSEN1-223ENST00000557511 BSPH1Q075Z2 132 aa7.3□□□□□ -1.24
PSEN1-223ENST00000557511 CD47Q08722 323 aa7.3□□□□□ -1.24
PSEN1-223ENST00000557511 TRAP1Q12931 704 aaKnown RBP7.3□□□□□ -1.24
PSEN1-223ENST00000557511 TOP3AQ13472 1001 aaPredicted RBP7.3□□□□□ -1.24
PSEN1-223ENST00000557511 FXNQ16595 210 aa7.3□□□□□ -1.24
PSEN1-223ENST00000557511 HIKESHIQ53FT3 197 aa7.3□□□□□ -1.24
PSEN1-223ENST00000557511 PODNL1Q6PEZ8 512 aa7.3□□□□□ -1.24
PSEN1-223ENST00000557511 ZNF813Q6ZN06 617 aa7.3□□□□□ -1.24
PSEN1-223ENST00000557511 TSPYL5Q86VY4 417 aaPredicted RBP7.3□□□□□ -1.24
PSEN1-223ENST00000557511 LINC00471Q8N535 108 aa7.3□□□□□ -1.24
PSEN1-223ENST00000557511 OR52J3Q8NH60 311 aa7.3□□□□□ -1.24
PSEN1-223ENST00000557511 OR51A7Q8NH64 312 aa7.3□□□□□ -1.24
PSEN1-223ENST00000557511 FOXB1Q99853 325 aa7.3□□□□□ -1.24
PSEN1-223ENST00000557511 BTBD10Q9BSF8 475 aa7.3□□□□□ -1.24
PSEN1-223ENST00000557511 C1QTNF6Q9BXI9 259 aa7.3□□□□□ -1.24
PSEN1-223ENST00000557511 CXorf56Q9H5V9 222 aa7.3□□□□□ -1.24
PSEN1-223ENST00000557511 MAGIXQ9H6Y5 334 aa7.3□□□□□ -1.24
PSEN1-223ENST00000557511 PLEKHF2Q9H8W4 249 aa7.3□□□□□ -1.24
PSEN1-223ENST00000557511 IL1RAPQ9NPH3 570 aa7.3□□□□□ -1.24
PSEN1-223ENST00000557511 C20orf141Q9NUB4 165 aa7.3□□□□□ -1.24
PSEN1-223ENST00000557511 CCM2LQ9NUG4 571 aaPredicted RBP7.3□□□□□ -1.24
PSEN1-223ENST00000557511 TAS2R5Q9NYW4 299 aa7.3□□□□□ -1.24
PSEN1-223ENST00000557511 TAS2R1Q9NYW7 299 aa7.3□□□□□ -1.24
PSEN1-223ENST00000557511 GRHPRQ9UBQ7 328 aa7.3□□□□□ -1.24
PSEN1-223ENST00000557511 FBXL3Q9UKT7 428 aa7.3□□□□□ -1.24
PSEN1-223ENST00000557511 HIF3AQ9Y2N7 669 aa7.3□□□□□ -1.24
PSEN1-223ENST00000557511 SLC25A15Q9Y619 301 aa7.3□□□□□ -1.24
PSEN1-223ENST00000557511 ATP23Q9Y6H3 246 aa7.3□□□□□ -1.24
PSEN1-223ENST00000557511 NOTCH2Q04721 2471 aa7.29□□□□□ -1.24
PSEN1-223ENST00000557511 TRAV27A0A087WT01 109 aa7.29□□□□□ -1.24
PSEN1-223ENST00000557511 ARPC4-TTLL3A0A0A6YYG9 625 aa7.29□□□□□ -1.24
PSEN1-223ENST00000557511 NPIPB13A6NJU9 1138 aa7.29□□□□□ -1.24
PSEN1-223ENST00000557511 NPIPB4C9JG80 1138 aa7.29□□□□□ -1.24
PSEN1-223ENST00000557511 TNFRSF11BO00300 401 aa7.29□□□□□ -1.24
PSEN1-223ENST00000557511 GNGT2O14610 69 aa7.29□□□□□ -1.24
PSEN1-223ENST00000557511 FFAR1O14842 300 aa7.29□□□□□ -1.24
PSEN1-223ENST00000557511 DHHO43323 396 aa7.29□□□□□ -1.24
PSEN1-223ENST00000557511 MGRN1O60291 552 aa7.29□□□□□ -1.24
PSEN1-223ENST00000557511 DNAJC8O75937 253 aaPredicted RBP7.29□□□□□ -1.24
PSEN1-223ENST00000557511 DIRAS1O95057 198 aa7.29□□□□□ -1.24
PSEN1-223ENST00000557511 UBL3O95164 117 aa7.29□□□□□ -1.24
PSEN1-223ENST00000557511 NDUFB2O95178 105 aa7.29□□□□□ -1.24
PSEN1-223ENST00000557511 T-ENOLP0DO92 83 aa7.29□□□□□ -1.24
PSEN1-223ENST00000557511 CD79AP11912 226 aa7.29□□□□□ -1.24
PSEN1-223ENST00000557511 ACADSP16219 412 aa7.29□□□□□ -1.24
PSEN1-223ENST00000557511 CD40P25942 277 aa7.29□□□□□ -1.24
PSEN1-223ENST00000557511 ARR3P36575 388 aa7.29□□□□□ -1.24
PSEN1-223ENST00000557511 ACVR1BP36896 505 aa7.29□□□□□ -1.24
PSEN1-223ENST00000557511 GPR4P46093 362 aa7.29□□□□□ -1.24
PSEN1-223ENST00000557511 RPS6KA3P51812 740 aa7.29□□□□□ -1.24
PSEN1-223ENST00000557511 IST1P53990 364 aa7.29□□□□□ -1.24
PSEN1-223ENST00000557511 CDH11P55287 796 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms