RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 MRPS2Q9Y399 296 aaKnown RBP2.56□□□□□ -2
VRK1-207ENST00000557352 MAD1L1Q9Y6D9 718 aa2.56□□□□□ -2
VRK1-207ENST00000557352 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.56□□□□□ -2
VRK1-207ENST00000557352 PCDH15Q96QU1 1955 aa2.56□□□□□ -2
VRK1-207ENST00000557352 SPTBP11277 2137 aa2.56□□□□□ -2
VRK1-207ENST00000557352 BDP1A6H8Y1 2624 aa2.55□□□□□ -2
VRK1-207ENST00000557352 IGLV3-16A0A075B6K0 115 aa2.55□□□□□ -2
VRK1-207ENST00000557352 GMNCA6NCL1 334 aa2.55□□□□□ -2
VRK1-207ENST00000557352 MFSD2BA6NFX1 497 aa2.55□□□□□ -2
VRK1-207ENST00000557352 TRIM49D1C9J1S8 452 aa2.55□□□□□ -2
VRK1-207ENST00000557352 SLC28A1O00337 649 aa2.55□□□□□ -2
VRK1-207ENST00000557352 TSPAN2O60636 221 aa2.55□□□□□ -2
VRK1-207ENST00000557352 KERAO60938 352 aa2.55□□□□□ -2
VRK1-207ENST00000557352 TECTAO75443 2155 aa2.55□□□□□ -2
VRK1-207ENST00000557352 BANF1O75531 89 aa2.55□□□□□ -2
VRK1-207ENST00000557352 BAG2O95816 211 aa2.55□□□□□ -2
VRK1-207ENST00000557352 TXNDC12O95881 172 aa2.55□□□□□ -2
VRK1-207ENST00000557352 MT-ND3P03897 115 aa2.55□□□□□ -2
VRK1-207ENST00000557352 AREGP15514 252 aa2.55□□□□□ -2
VRK1-207ENST00000557352 PSMC3P17980 439 aa2.55□□□□□ -2
VRK1-207ENST00000557352 POLR2EP19388 210 aaKnown RBP2.55□□□□□ -2
VRK1-207ENST00000557352 PSMB1P20618 241 aaKnown RBP2.55□□□□□ -2
VRK1-207ENST00000557352 IDSP22304 550 aa2.55□□□□□ -2
VRK1-207ENST00000557352 UCP1P25874 307 aa2.55□□□□□ -2
VRK1-207ENST00000557352 TEAD1P28347 426 aa2.55□□□□□ -2
VRK1-207ENST00000557352 FOXN2P32314 431 aa2.55□□□□□ -2
VRK1-207ENST00000557352 HPDP32754 393 aaPredicted RBP2.55□□□□□ -2
VRK1-207ENST00000557352 CD70P32970 193 aa2.55□□□□□ -2
VRK1-207ENST00000557352 CA8P35219 290 aa2.55□□□□□ -2
VRK1-207ENST00000557352 SLC1A2P43004 574 aa2.55□□□□□ -2
VRK1-207ENST00000557352 SLCO1A2P46721 670 aa2.55□□□□□ -2
VRK1-207ENST00000557352 CD151P48509 253 aa2.55□□□□□ -2
VRK1-207ENST00000557352 TTPAP49638 278 aa2.55□□□□□ -2
VRK1-207ENST00000557352 CCNHP51946 323 aaPredicted RBP2.55□□□□□ -2
VRK1-207ENST00000557352 MAXP61244 160 aa2.55□□□□□ -2
VRK1-207ENST00000557352 CRADDP78560 199 aa2.55□□□□□ -2
VRK1-207ENST00000557352 BCL2L1Q07817 233 aa2.55□□□□□ -2
VRK1-207ENST00000557352 PPP1R8Q12972 351 aaKnown RBP2.55□□□□□ -2
VRK1-207ENST00000557352 HTR4Q13639 388 aa2.55□□□□□ -2
VRK1-207ENST00000557352 GK2Q14410 553 aaPredicted RBP2.55□□□□□ -2
VRK1-207ENST00000557352 ELAVL3Q14576 367 aaKnown RBP2.55□□□□□ -2
VRK1-207ENST00000557352 ITIH4Q14624 930 aa2.55□□□□□ -2
VRK1-207ENST00000557352 POU6F1Q14863 301 aa2.55□□□□□ -2
VRK1-207ENST00000557352 TMED2Q15363 201 aa2.55□□□□□ -2
VRK1-207ENST00000557352 CDKN3Q16667 212 aa2.55□□□□□ -2
VRK1-207ENST00000557352 HNRNPA1L2Q32P51 320 aaKnown RBP2.55□□□□□ -2
VRK1-207ENST00000557352 HSP90AA5PQ58FG0 334 aa2.55□□□□□ -2
VRK1-207ENST00000557352 CARD16Q5EG05 197 aa2.55□□□□□ -2
VRK1-207ENST00000557352 TCEAL5Q5H9L2 206 aa2.55□□□□□ -2
VRK1-207ENST00000557352 FAM78AQ5JUQ0 283 aa2.55□□□□□ -2
VRK1-207ENST00000557352 CDKL4Q5MAI5 379 aa2.55□□□□□ -2
VRK1-207ENST00000557352 TMEM215Q68D42 235 aa2.55□□□□□ -2
VRK1-207ENST00000557352 KCTD16Q68DU8 428 aa2.55□□□□□ -2
VRK1-207ENST00000557352 HIST2H2AA3Q6FI13 130 aa2.55□□□□□ -2
VRK1-207ENST00000557352 ETFRF1Q6IPR1 90 aa2.55□□□□□ -2
VRK1-207ENST00000557352 FAM45BPQ6NSW5 357 aa2.55□□□□□ -2
VRK1-207ENST00000557352 TTC23LQ6PF05 361 aa2.55□□□□□ -2
VRK1-207ENST00000557352 GLT6D1Q7Z4J2 308 aa2.55□□□□□ -2
VRK1-207ENST00000557352 SNX20Q7Z614 316 aa2.55□□□□□ -2
VRK1-207ENST00000557352 SNX32Q86XE0 403 aa2.55□□□□□ -2
VRK1-207ENST00000557352 SERPINA12Q8IW75 414 aa2.55□□□□□ -2
VRK1-207ENST00000557352 CTAGE3PQ8IX95 158 aa2.55□□□□□ -2
VRK1-207ENST00000557352 CHCHD4Q8N4Q1 142 aa2.55□□□□□ -2
VRK1-207ENST00000557352 RELL2Q8NC24 303 aaPredicted RBP2.55□□□□□ -2
VRK1-207ENST00000557352 OR2A12Q8NGT7 310 aa2.55□□□□□ -2
VRK1-207ENST00000557352 OR4A16Q8NH70 328 aa2.55□□□□□ -2
VRK1-207ENST00000557352 RHEBL1Q8TAI7 183 aa2.55□□□□□ -2
VRK1-207ENST00000557352 ITFG1Q8TB96 612 aa2.55□□□□□ -2
VRK1-207ENST00000557352 FAM45AQ8TCE6 357 aa2.55□□□□□ -2
VRK1-207ENST00000557352 TCP10LQ8TDR4 215 aa2.55□□□□□ -2
VRK1-207ENST00000557352 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.55□□□□□ -2
VRK1-207ENST00000557352 RAB7BQ96AH8 199 aa2.55□□□□□ -2
VRK1-207ENST00000557352 CCDC126Q96EE4 140 aa2.55□□□□□ -2
VRK1-207ENST00000557352 CHMP6Q96FZ7 201 aa2.55□□□□□ -2
VRK1-207ENST00000557352 ASXL3Q9C0F0 2248 aa2.55□□□□□ -2
VRK1-207ENST00000557352 NSRP1Q9H0G5 558 aaKnown RBP2.55□□□□□ -2
VRK1-207ENST00000557352 FAM96AQ9H5X1 160 aa2.55□□□□□ -2
VRK1-207ENST00000557352 ECT2Q9H8V3 914 aa2.55□□□□□ -2
VRK1-207ENST00000557352 HPS4Q9NQG7 708 aa2.55□□□□□ -2
VRK1-207ENST00000557352 CHRAC1Q9NRG0 131 aa2.55□□□□□ -2
VRK1-207ENST00000557352 C20orf96Q9NUD7 363 aaPredicted RBP2.55□□□□□ -2
VRK1-207ENST00000557352 ELOVL2Q9NXB9 296 aa2.55□□□□□ -2
VRK1-207ENST00000557352 DPM3Q9P2X0 92 aa2.55□□□□□ -2
VRK1-207ENST00000557352 DEC1Q9P2X7 70 aa2.55□□□□□ -2
VRK1-207ENST00000557352 APPL1Q9UKG1 709 aa2.55□□□□□ -2
VRK1-207ENST00000557352 FBXO5Q9UKT4 447 aa2.55□□□□□ -2
VRK1-207ENST00000557352 TMCO1Q9UM00 188 aa2.55□□□□□ -2
VRK1-207ENST00000557352 SCML1Q9UN30 329 aa2.55□□□□□ -2
VRK1-207ENST00000557352 ERVW-1Q9UQF0 538 aa2.55□□□□□ -2
VRK1-207ENST00000557352 TDRKHQ9Y2W6 561 aaKnown RBP2.55□□□□□ -2
VRK1-207ENST00000557352 PLLPQ9Y342 182 aa2.55□□□□□ -2
VRK1-207ENST00000557352 ATG4BQ9Y4P1 393 aa2.55□□□□□ -2
VRK1-207ENST00000557352 MTCH2Q9Y6C9 303 aa2.55□□□□□ -2
VRK1-207ENST00000557352 SDK1Q7Z5N4 2213 aa2.54□□□□□ -2
VRK1-207ENST00000557352 SCN2AQ99250 2005 aa2.54□□□□□ -2
VRK1-207ENST00000557352 XIRP2A4UGR9 3374 aa2.54□□□□□ -2
VRK1-207ENST00000557352 UNC80Q8N2C7 3258 aa2.54□□□□□ -2
VRK1-207ENST00000557352 C5orf51A6NDU8 294 aa2.54□□□□□ -2
VRK1-207ENST00000557352 TMEM114B3SHH9 223 aa2.54□□□□□ -2
VRK1-207ENST00000557352 C10orf142B7Z368 130 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms