RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 MRPL13Q9BYD1 178 aaKnown RBP9.35□□□□□ -0.91
LINC00239-201ENST00000556973 TXNIPQ9H3M7 391 aa9.35□□□□□ -0.91
LINC00239-201ENST00000556973 UBTD1Q9HAC8 227 aa9.35□□□□□ -0.91
LINC00239-201ENST00000556973 CCM2LQ9NUG4 571 aaPredicted RBP9.35□□□□□ -0.91
LINC00239-201ENST00000556973 ITGB1BP2Q9UKP3 347 aa9.35□□□□□ -0.91
LINC00239-201ENST00000556973 POFUT2Q9Y2G5 429 aa9.35□□□□□ -0.91
LINC00239-201ENST00000556973 PLEKHA6Q9Y2H5 1048 aa9.35□□□□□ -0.91
LINC00239-201ENST00000556973 TRAV27A0A087WT01 109 aa9.34□□□□□ -0.91
LINC00239-201ENST00000556973 TRBV4-1A0A0J9YWV2 114 aa9.34□□□□□ -0.91
LINC00239-201ENST00000556973 M0R1B8 84 aa9.34□□□□□ -0.91
LINC00239-201ENST00000556973 CDC42EP2O14613 210 aa9.34□□□□□ -0.91
LINC00239-201ENST00000556973 ABCD4O14678 606 aa9.34□□□□□ -0.91
LINC00239-201ENST00000556973 HS3ST1O14792 307 aa9.34□□□□□ -0.91
LINC00239-201ENST00000556973 GSC2O15499 205 aa9.34□□□□□ -0.91
LINC00239-201ENST00000556973 PTP4A3O75365 173 aa9.34□□□□□ -0.91
LINC00239-201ENST00000556973 TRMUO75648 421 aaKnown RBP9.34□□□□□ -0.91
LINC00239-201ENST00000556973 DNAJC8O75937 253 aaPredicted RBP9.34□□□□□ -0.91
LINC00239-201ENST00000556973 QDPRP09417 244 aa9.34□□□□□ -0.91
LINC00239-201ENST00000556973 HOXB6P17509 224 aaKnown RBP9.34□□□□□ -0.91
LINC00239-201ENST00000556973 RRM2P31350 389 aa9.34□□□□□ -0.91
LINC00239-201ENST00000556973 IFNGR2P38484 337 aa9.34□□□□□ -0.91
LINC00239-201ENST00000556973 LIMS1P48059 325 aa9.34□□□□□ -0.91
LINC00239-201ENST00000556973 CLRN1P58418 232 aa9.34□□□□□ -0.91
LINC00239-201ENST00000556973 CTXN1P60606 82 aa9.34□□□□□ -0.91
LINC00239-201ENST00000556973 RPL27P61353 136 aaKnown RBP9.34□□□□□ -0.91
LINC00239-201ENST00000556973 CHRNB3Q05901 458 aa9.34□□□□□ -0.91
LINC00239-201ENST00000556973 SEC23BQ15437 767 aa9.34□□□□□ -0.91
LINC00239-201ENST00000556973 C3orf36Q3SXR2 165 aa9.34□□□□□ -0.91
LINC00239-201ENST00000556973 ZNF672Q499Z4 452 aaPredicted RBP9.34□□□□□ -0.91
LINC00239-201ENST00000556973 LRFN4Q6PJG9 635 aa9.34□□□□□ -0.91
LINC00239-201ENST00000556973 MEX3DQ86XN8 651 aaKnown RBP9.34□□□□□ -0.91
LINC00239-201ENST00000556973 ZNF611Q8N823 705 aa9.34□□□□□ -0.91
LINC00239-201ENST00000556973 FAM169BQ8N8A8 192 aa9.34□□□□□ -0.91
LINC00239-201ENST00000556973 LRRC75AQ8NAA5 344 aa9.34□□□□□ -0.91
LINC00239-201ENST00000556973 AKAP1Q92667 903 aaKnown RBP eCLIP9.34□□□□□ -0.91
LINC00239-201ENST00000556973 FAM46AQ96IP4 442 aaKnown RBP9.34□□□□□ -0.91
LINC00239-201ENST00000556973 FOXC2Q99958 501 aa9.34□□□□□ -0.91
LINC00239-201ENST00000556973 TRIM15Q9C019 465 aa9.34□□□□□ -0.91
LINC00239-201ENST00000556973 NDEL1Q9GZM8 345 aa9.34□□□□□ -0.91
LINC00239-201ENST00000556973 NELFAQ9H3P2 528 aa9.34□□□□□ -0.91
LINC00239-201ENST00000556973 ZNF346Q9UL40 294 aaKnown RBP9.34□□□□□ -0.91
LINC00239-201ENST00000556973 TMCC3Q9ULS5 477 aa9.34□□□□□ -0.91
LINC00239-201ENST00000556973 AURKCQ9UQB9 309 aa9.34□□□□□ -0.91
LINC00239-201ENST00000556973 ANKHD1Q8IWZ3 2542 aaKnown RBP9.34□□□□□ -0.91
LINC00239-201ENST00000556973 A6NIZ1 184 aa9.33□□□□□ -0.92
LINC00239-201ENST00000556973 AQP12BA6NM10 295 aa9.33□□□□□ -0.92
LINC00239-201ENST00000556973 DHHO43323 396 aa9.33□□□□□ -0.92
LINC00239-201ENST00000556973 MGRN1O60291 552 aa9.33□□□□□ -0.92
LINC00239-201ENST00000556973 ENTPD5O75356 428 aa9.33□□□□□ -0.92
LINC00239-201ENST00000556973 IGHMP01871 453 aa9.33□□□□□ -0.92
LINC00239-201ENST00000556973 RAP2AP10114 183 aa9.33□□□□□ -0.92
LINC00239-201ENST00000556973 CBR1P16152 277 aa9.33□□□□□ -0.92
LINC00239-201ENST00000556973 CD53P19397 219 aa9.33□□□□□ -0.92
LINC00239-201ENST00000556973 RPL4P36578 427 aaKnown RBP9.33□□□□□ -0.92
LINC00239-201ENST00000556973 ACVR1BP36896 505 aa9.33□□□□□ -0.92
LINC00239-201ENST00000556973 MAGEA2P43356 314 aa9.33□□□□□ -0.92
LINC00239-201ENST00000556973 ZNF133P52736 654 aaPredicted RBP9.33□□□□□ -0.92
LINC00239-201ENST00000556973 RAP1BP61224 184 aa9.33□□□□□ -0.92
LINC00239-201ENST00000556973 RAP1AP62834 184 aa9.33□□□□□ -0.92
LINC00239-201ENST00000556973 RUNX1T1Q06455 604 aa9.33□□□□□ -0.92
LINC00239-201ENST00000556973 DEFB113Q30KQ7 82 aa9.33□□□□□ -0.92
LINC00239-201ENST00000556973 FAM205BPQ63HN1 556 aa9.33□□□□□ -0.92
LINC00239-201ENST00000556973 C1orf94Q6P1W5 598 aa9.33□□□□□ -0.92
LINC00239-201ENST00000556973 SLC22A25Q6T423 547 aa9.33□□□□□ -0.92
LINC00239-201ENST00000556973 ZNF813Q6ZN06 617 aa9.33□□□□□ -0.92
LINC00239-201ENST00000556973 ZER1Q7Z7L7 766 aa9.33□□□□□ -0.92
LINC00239-201ENST00000556973 AQP12AQ8IXF9 295 aa9.33□□□□□ -0.92
LINC00239-201ENST00000556973 PIAS4Q8N2W9 510 aaPredicted RBP9.33□□□□□ -0.92
LINC00239-201ENST00000556973 LINC00471Q8N535 108 aa9.33□□□□□ -0.92
LINC00239-201ENST00000556973 SYT14Q8NB59 555 aa9.33□□□□□ -0.92
LINC00239-201ENST00000556973 NOXO1Q8NFA2 376 aa9.33□□□□□ -0.92
LINC00239-201ENST00000556973 OR13C2Q8NGS9 318 aa9.33□□□□□ -0.92
LINC00239-201ENST00000556973 FNDC8Q8TC99 324 aa9.33□□□□□ -0.92
LINC00239-201ENST00000556973 FBXW5Q969U6 566 aa9.33□□□□□ -0.92
LINC00239-201ENST00000556973 MCHR2Q969V1 340 aa9.33□□□□□ -0.92
LINC00239-201ENST00000556973 CCDC124Q96CT7 223 aaKnown RBP9.33□□□□□ -0.92
LINC00239-201ENST00000556973 RBP7Q96R05 134 aa9.33□□□□□ -0.92
LINC00239-201ENST00000556973 FOXB1Q99853 325 aa9.33□□□□□ -0.92
LINC00239-201ENST00000556973 BEX4Q9NWD9 120 aaPredicted RBP9.33□□□□□ -0.92
LINC00239-201ENST00000556973 CISD1Q9NZ45 108 aaKnown RBP9.33□□□□□ -0.92
LINC00239-201ENST00000556973 CRNNQ9UBG3 495 aaPredicted RBP9.33□□□□□ -0.92
LINC00239-201ENST00000556973 GRHPRQ9UBQ7 328 aa9.33□□□□□ -0.92
LINC00239-201ENST00000556973 CSMD1Q96PZ7 3565 aa9.32□□□□□ -0.92
LINC00239-201ENST00000556973 IGHV1-18A0A0C4DH31 117 aa9.32□□□□□ -0.92
LINC00239-201ENST00000556973 UNC119BA6NIH7 251 aa9.32□□□□□ -0.92
LINC00239-201ENST00000556973 SHISA9B4DS77 424 aa9.32□□□□□ -0.92
LINC00239-201ENST00000556973 TNFRSF11BO00300 401 aa9.32□□□□□ -0.92
LINC00239-201ENST00000556973 OR10H3O60404 316 aa9.32□□□□□ -0.92
LINC00239-201ENST00000556973 TMCC2O75069 709 aa9.32□□□□□ -0.92
LINC00239-201ENST00000556973 NDUFB2O95178 105 aa9.32□□□□□ -0.92
LINC00239-201ENST00000556973 IGKV3-15P01624 115 aa9.32□□□□□ -0.92
LINC00239-201ENST00000556973 OR8G3PP0DMU2 310 aa9.32□□□□□ -0.92
LINC00239-201ENST00000556973 NR2C1P13056 603 aa9.32□□□□□ -0.92
LINC00239-201ENST00000556973 ARR3P36575 388 aa9.32□□□□□ -0.92
LINC00239-201ENST00000556973 ZNF84P51523 738 aa9.32□□□□□ -0.92
LINC00239-201ENST00000556973 ART1P52961 327 aa9.32□□□□□ -0.92
LINC00239-201ENST00000556973 TESK1Q15569 626 aa9.32□□□□□ -0.92
LINC00239-201ENST00000556973 NRN1LQ496H8 165 aa9.32□□□□□ -0.92
LINC00239-201ENST00000556973 THEM4Q5T1C6 240 aa9.32□□□□□ -0.92
LINC00239-201ENST00000556973 DPY19L2P2Q6ZN68 376 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms