RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 A0A096LPE4 126 aa15.35■□□□□ 0.05
SHMT2-225ENST00000556798 A0A1W2PPZ6 126 aa15.35■□□□□ 0.05
SHMT2-225ENST00000556798 NPIPB13A6NJU9 1138 aa15.35■□□□□ 0.05
SHMT2-225ENST00000556798 OR5H1A6NKK0 313 aa15.35■□□□□ 0.05
SHMT2-225ENST00000556798 NPIPB4C9JG80 1138 aa15.35■□□□□ 0.05
SHMT2-225ENST00000556798 RPL36A-HNRNPH2H7BZ11 118 aa15.35■□□□□ 0.05
SHMT2-225ENST00000556798 CASKO14936 926 aa15.35■□□□□ 0.05
SHMT2-225ENST00000556798 CD14P08571 375 aa15.35■□□□□ 0.05
SHMT2-225ENST00000556798 ACADSP16219 412 aa15.35■□□□□ 0.05
SHMT2-225ENST00000556798 ACVR1BP36896 505 aa15.35■□□□□ 0.05
SHMT2-225ENST00000556798 ARF1P84077 181 aaKnown RBP15.35■□□□□ 0.05
SHMT2-225ENST00000556798 TLE4Q04727 773 aa15.35■□□□□ 0.05
SHMT2-225ENST00000556798 ZSCAN26Q16670 478 aa15.35■□□□□ 0.05
SHMT2-225ENST00000556798 HIKESHIQ53FT3 197 aa15.35■□□□□ 0.05
SHMT2-225ENST00000556798 SMARCD3Q6STE5 483 aa15.35■□□□□ 0.05
SHMT2-225ENST00000556798 ZNF620Q6ZNG0 422 aa15.35■□□□□ 0.05
SHMT2-225ENST00000556798 CLDN22Q8N7P3 220 aa15.35■□□□□ 0.05
SHMT2-225ENST00000556798 OR1K1Q8NGR3 316 aa15.35■□□□□ 0.05
SHMT2-225ENST00000556798 OR52N5Q8NH56 324 aa15.35■□□□□ 0.05
SHMT2-225ENST00000556798 GIPC3Q8TF64 312 aa15.35■□□□□ 0.05
SHMT2-225ENST00000556798 PYDC1Q8WXC3 89 aa15.35■□□□□ 0.05
SHMT2-225ENST00000556798 DUS3LQ96G46 650 aaKnown RBP15.35■□□□□ 0.05
SHMT2-225ENST00000556798 SAMD8Q96LT4 415 aa15.35■□□□□ 0.05
SHMT2-225ENST00000556798 Q96M85 177 aa15.35■□□□□ 0.05
SHMT2-225ENST00000556798 MUS81Q96NY9 551 aa15.35■□□□□ 0.05
SHMT2-225ENST00000556798 NDEL1Q9GZM8 345 aa15.35■□□□□ 0.05
SHMT2-225ENST00000556798 EGLN3Q9H6Z9 239 aa15.35■□□□□ 0.05
SHMT2-225ENST00000556798 NTN4Q9HB63 628 aa15.35■□□□□ 0.05
SHMT2-225ENST00000556798 B3GAT2Q9NPZ5 323 aa15.35■□□□□ 0.05
SHMT2-225ENST00000556798 ARMC1Q9NVT9 282 aa15.35■□□□□ 0.05
SHMT2-225ENST00000556798 ZNF226Q9NYT6 803 aa15.35■□□□□ 0.05
SHMT2-225ENST00000556798 GLTPQ9NZD2 209 aa15.35■□□□□ 0.05
SHMT2-225ENST00000556798 PDP1Q9P0J1 537 aaPredicted RBP15.35■□□□□ 0.05
SHMT2-225ENST00000556798 FBN2P35556 2912 aa15.35■□□□□ 0.05
SHMT2-225ENST00000556798 ABCA12Q86UK0 2595 aa15.34■□□□□ 0.05
SHMT2-225ENST00000556798 A6NNC1 897 aa15.34■□□□□ 0.05
SHMT2-225ENST00000556798 H7C1C5 153 aa15.34■□□□□ 0.05
SHMT2-225ENST00000556798 SIAH2O43255 324 aa15.34■□□□□ 0.05
SHMT2-225ENST00000556798 DEAF1O75398 565 aaPredicted RBP15.34■□□□□ 0.05
SHMT2-225ENST00000556798 PPP1R3DO95685 299 aa15.34■□□□□ 0.05
SHMT2-225ENST00000556798 CRYGSP22914 178 aa15.34■□□□□ 0.05
SHMT2-225ENST00000556798 LCN6P62502 163 aa15.34■□□□□ 0.05
SHMT2-225ENST00000556798 TGFBR3Q03167 851 aa15.34■□□□□ 0.05
SHMT2-225ENST00000556798 GK3PQ14409 553 aa15.34■□□□□ 0.05
SHMT2-225ENST00000556798 TAF11Q15544 211 aa15.34■□□□□ 0.05
SHMT2-225ENST00000556798 TIMM23BQ5SRD1 257 aa15.34■□□□□ 0.05
SHMT2-225ENST00000556798 OR7E24Q6IFN5 339 aa15.34■□□□□ 0.05
SHMT2-225ENST00000556798 HDDC2Q7Z4H3 204 aa15.34■□□□□ 0.05
SHMT2-225ENST00000556798 C1orf162Q8NEQ5 155 aaPredicted RBP15.34■□□□□ 0.05
SHMT2-225ENST00000556798 ZNF519Q8TB69 540 aa15.34■□□□□ 0.05
SHMT2-225ENST00000556798 RASD2Q96D21 266 aa15.34■□□□□ 0.05
SHMT2-225ENST00000556798 C14orf79Q96F83 325 aa15.34■□□□□ 0.05
SHMT2-225ENST00000556798 ZNF570Q96NI8 536 aa15.34■□□□□ 0.05
SHMT2-225ENST00000556798 GPX7Q96SL4 187 aaPredicted RBP15.34■□□□□ 0.05
SHMT2-225ENST00000556798 NIPSNAP1Q9BPW8 284 aa15.34■□□□□ 0.05
SHMT2-225ENST00000556798 MRPL13Q9BYD1 178 aaKnown RBP15.34■□□□□ 0.05
SHMT2-225ENST00000556798 NELFAQ9H3P2 528 aa15.34■□□□□ 0.05
SHMT2-225ENST00000556798 DENND2DQ9H6A0 471 aaPredicted RBP15.34■□□□□ 0.05
SHMT2-225ENST00000556798 GRHPRQ9UBQ7 328 aa15.34■□□□□ 0.05
SHMT2-225ENST00000556798 MAGED1Q9Y5V3 778 aaPredicted RBP15.34■□□□□ 0.05
SHMT2-225ENST00000556798 HEATR1Q9H583 2144 aaKnown RBP15.34■□□□□ 0.05
SHMT2-225ENST00000556798 TEX13CA0A0J9YWL9 993 aa15.33■□□□□ 0.04
SHMT2-225ENST00000556798 SOX14O95416 240 aa15.33■□□□□ 0.04
SHMT2-225ENST00000556798 IGFBP1P08833 259 aaPredicted RBP15.33■□□□□ 0.04
SHMT2-225ENST00000556798 QDPRP09417 244 aa15.33■□□□□ 0.04
SHMT2-225ENST00000556798 TUBA1BP68363 451 aa15.33■□□□□ 0.04
SHMT2-225ENST00000556798 TUBA4AP68366 448 aa15.33■□□□□ 0.04
SHMT2-225ENST00000556798 FMODQ06828 376 aa15.33■□□□□ 0.04
SHMT2-225ENST00000556798 CD47Q08722 323 aa15.33■□□□□ 0.04
SHMT2-225ENST00000556798 DAZAP2Q15038 168 aaPredicted RBP15.33■□□□□ 0.04
SHMT2-225ENST00000556798 PPA1Q15181 289 aa15.33■□□□□ 0.04
SHMT2-225ENST00000556798 ATP6AP1Q15904 470 aa15.33■□□□□ 0.04
SHMT2-225ENST00000556798 RFX4Q33E94 735 aa15.33■□□□□ 0.04
SHMT2-225ENST00000556798 TBRG1Q3YBR2 411 aa15.33■□□□□ 0.04
SHMT2-225ENST00000556798 MESTQ5EB52 335 aa15.33■□□□□ 0.04
SHMT2-225ENST00000556798 LRFN4Q6PJG9 635 aa15.33■□□□□ 0.04
SHMT2-225ENST00000556798 SEZ6L2Q6UXD5 910 aa15.33■□□□□ 0.04
SHMT2-225ENST00000556798 TUBA1AQ71U36 451 aa15.33■□□□□ 0.04
SHMT2-225ENST00000556798 FAM122BQ7Z309 247 aa15.33■□□□□ 0.04
SHMT2-225ENST00000556798 AMIGO2Q86SJ2 522 aa15.33■□□□□ 0.04
SHMT2-225ENST00000556798 TMEM200AQ86VY9 491 aa15.33■□□□□ 0.04
SHMT2-225ENST00000556798 WDR31Q8NA23 367 aa15.33■□□□□ 0.04
SHMT2-225ENST00000556798 LRTOMTQ8WZ04 291 aa15.33■□□□□ 0.04
SHMT2-225ENST00000556798 HSD17B8Q92506 261 aa15.33■□□□□ 0.04
SHMT2-225ENST00000556798 KCNK17Q96T54 332 aa15.33■□□□□ 0.04
SHMT2-225ENST00000556798 FEVQ99581 238 aa15.33■□□□□ 0.04
SHMT2-225ENST00000556798 DGCR6LQ9BY27 220 aa15.33■□□□□ 0.04
SHMT2-225ENST00000556798 PLA2G12AQ9BZM1 189 aa15.33■□□□□ 0.04
SHMT2-225ENST00000556798 NRIP3Q9NQ35 241 aa15.33■□□□□ 0.04
SHMT2-225ENST00000556798 SLC17A5Q9NRA2 495 aa15.33■□□□□ 0.04
SHMT2-225ENST00000556798 STX18Q9P2W9 335 aaKnown RBP15.33■□□□□ 0.04
SHMT2-225ENST00000556798 MGAT4BQ9UQ53 548 aa15.33■□□□□ 0.04
SHMT2-225ENST00000556798 IER3IP1Q9Y5U9 82 aa15.33■□□□□ 0.04
SHMT2-225ENST00000556798 CDH10Q9Y6N8 788 aa15.33■□□□□ 0.04
SHMT2-225ENST00000556798 A6NIZ1 184 aa15.32■□□□□ 0.04
SHMT2-225ENST00000556798 DEFB108AA8MXU0 73 aa15.32■□□□□ 0.04
SHMT2-225ENST00000556798 ZNF99A8MXY4 864 aaPredicted RBP15.32■□□□□ 0.04
SHMT2-225ENST00000556798 ANKRD65E5RJM6 399 aa15.32■□□□□ 0.04
SHMT2-225ENST00000556798 SOCS2O14508 198 aa15.32■□□□□ 0.04
SHMT2-225ENST00000556798 ARHGEF9O43307 516 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms