RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 NIPBLQ6KC79 2804 aaeCLIP8.99□□□□□ -0.97
SHMT2-224ENST00000556737 A0A096LPE4 126 aa8.99□□□□□ -0.97
SHMT2-224ENST00000556737 A0A1W2PPZ6 126 aa8.99□□□□□ -0.97
SHMT2-224ENST00000556737 TCRBV5S2A0A599 114 aa8.99□□□□□ -0.97
SHMT2-224ENST00000556737 TCRBV3S1A0A5B6 114 aa8.99□□□□□ -0.97
SHMT2-224ENST00000556737 SLC35F4A4IF30 521 aa8.99□□□□□ -0.97
SHMT2-224ENST00000556737 KPNA4O00629 521 aaPredicted RBP8.99□□□□□ -0.97
SHMT2-224ENST00000556737 MGRN1O60291 552 aa8.99□□□□□ -0.97
SHMT2-224ENST00000556737 CH25HO95992 272 aa8.99□□□□□ -0.97
SHMT2-224ENST00000556737 IGKV3-15P01624 115 aa8.99□□□□□ -0.97
SHMT2-224ENST00000556737 MT-ND1P03886 318 aa8.99□□□□□ -0.97
SHMT2-224ENST00000556737 HEXAP06865 529 aa8.99□□□□□ -0.97
SHMT2-224ENST00000556737 ASAH2BP0C7U1 165 aa8.99□□□□□ -0.97
SHMT2-224ENST00000556737 CECR9P0C854 216 aa8.99□□□□□ -0.97
SHMT2-224ENST00000556737 UMPSP11172 480 aa8.99□□□□□ -0.97
SHMT2-224ENST00000556737 ACVR1BP36896 505 aa8.99□□□□□ -0.97
SHMT2-224ENST00000556737 OR1E2P47887 323 aa8.99□□□□□ -0.97
SHMT2-224ENST00000556737 UGT2B15P54855 530 aa8.99□□□□□ -0.97
SHMT2-224ENST00000556737 IL1RL1Q01638 556 aa8.99□□□□□ -0.97
SHMT2-224ENST00000556737 KRTAP1-1Q07627 177 aa8.99□□□□□ -0.97
SHMT2-224ENST00000556737 PMS2P3Q13401 168 aa8.99□□□□□ -0.97
SHMT2-224ENST00000556737 SNCBQ16143 134 aa8.99□□□□□ -0.97
SHMT2-224ENST00000556737 FXNQ16595 210 aa8.99□□□□□ -0.97
SHMT2-224ENST00000556737 C3orf36Q3SXR2 165 aa8.99□□□□□ -0.97
SHMT2-224ENST00000556737 CARD17Q5XLA6 110 aa8.99□□□□□ -0.97
SHMT2-224ENST00000556737 HMBOX1Q6NT76 420 aa8.99□□□□□ -0.97
SHMT2-224ENST00000556737 ZNF544Q6NX49 715 aa8.99□□□□□ -0.97
SHMT2-224ENST00000556737 TTC33Q6PID6 262 aaPredicted RBP8.99□□□□□ -0.97
SHMT2-224ENST00000556737 ZNF627Q7L945 461 aa8.99□□□□□ -0.97
SHMT2-224ENST00000556737 PXKQ7Z7A4 578 aa8.99□□□□□ -0.97
SHMT2-224ENST00000556737 NKAIN4Q8IVV8 208 aa8.99□□□□□ -0.97
SHMT2-224ENST00000556737 MUC15Q8N387 334 aa8.99□□□□□ -0.97
SHMT2-224ENST00000556737 GPR137CQ8N3F9 429 aa8.99□□□□□ -0.97
SHMT2-224ENST00000556737 C10orf53Q8N6V4 93 aa8.99□□□□□ -0.97
SHMT2-224ENST00000556737 LRRC17Q8N6Y2 441 aa8.99□□□□□ -0.97
SHMT2-224ENST00000556737 PFN4Q8NHR9 129 aa8.99□□□□□ -0.97
SHMT2-224ENST00000556737 TMEM255BQ8WV15 326 aa8.99□□□□□ -0.97
SHMT2-224ENST00000556737 PROX1Q92786 737 aa8.99□□□□□ -0.97
SHMT2-224ENST00000556737 POP5Q969H6 163 aaKnown RBP8.99□□□□□ -0.97
SHMT2-224ENST00000556737 GTPBP3Q969Y2 492 aaKnown RBP8.99□□□□□ -0.97
SHMT2-224ENST00000556737 TXNDC15Q96J42 360 aa8.99□□□□□ -0.97
SHMT2-224ENST00000556737 HSH2DQ96JZ2 352 aa8.99□□□□□ -0.97
SHMT2-224ENST00000556737 BDH2Q9BUT1 245 aa8.99□□□□□ -0.97
SHMT2-224ENST00000556737 KATNB1Q9BVA0 655 aa8.99□□□□□ -0.97
SHMT2-224ENST00000556737 POLR2J2Q9GZM3 115 aaKnown RBP8.99□□□□□ -0.97
SHMT2-224ENST00000556737 POLR2J3Q9H1A7 115 aaKnown RBP8.99□□□□□ -0.97
SHMT2-224ENST00000556737 DCLRE1BQ9H816 532 aa8.99□□□□□ -0.97
SHMT2-224ENST00000556737 YY1AP1Q9H869 796 aa8.99□□□□□ -0.97
SHMT2-224ENST00000556737 NOX3Q9HBY0 568 aa8.99□□□□□ -0.97
SHMT2-224ENST00000556737 CRLF2Q9HC73 371 aa8.99□□□□□ -0.97
SHMT2-224ENST00000556737 CBLN4Q9NTU7 201 aa8.99□□□□□ -0.97
SHMT2-224ENST00000556737 DCAF13Q9NV06 445 aaKnown RBP8.99□□□□□ -0.97
SHMT2-224ENST00000556737 FAIMQ9NVQ4 179 aa8.99□□□□□ -0.97
SHMT2-224ENST00000556737 TAS2R5Q9NYW4 299 aa8.99□□□□□ -0.97
SHMT2-224ENST00000556737 POU2F3Q9UKI9 436 aa8.99□□□□□ -0.97
SHMT2-224ENST00000556737 MOKQ9UQ07 419 aa8.99□□□□□ -0.97
SHMT2-224ENST00000556737 SH3GLB1Q9Y371 365 aa8.99□□□□□ -0.97
SHMT2-224ENST00000556737 DNHD1Q96M86 4753 aa8.99□□□□□ -0.97
SHMT2-224ENST00000556737 FN1P02751 2386 aaKnown RBP8.99□□□□□ -0.97
SHMT2-224ENST00000556737 ZNF99A8MXY4 864 aaPredicted RBP8.98□□□□□ -0.97
SHMT2-224ENST00000556737 C11orf98E9PRG8 122 aa8.98□□□□□ -0.97
SHMT2-224ENST00000556737 H7C417 338 aa8.98□□□□□ -0.97
SHMT2-224ENST00000556737 M0R3G1 203 aa8.98□□□□□ -0.97
SHMT2-224ENST00000556737 GNGT2O14610 69 aa8.98□□□□□ -0.97
SHMT2-224ENST00000556737 SMAD7O15105 426 aaKnown RBP8.98□□□□□ -0.97
SHMT2-224ENST00000556737 TIPRLO75663 272 aa8.98□□□□□ -0.97
SHMT2-224ENST00000556737 SERPINI2O75830 405 aa8.98□□□□□ -0.97
SHMT2-224ENST00000556737 OR5F1O95221 314 aa8.98□□□□□ -0.97
SHMT2-224ENST00000556737 LY6G6DO95868 133 aa8.98□□□□□ -0.97
SHMT2-224ENST00000556737 CELA3BP08861 270 aa8.98□□□□□ -0.97
SHMT2-224ENST00000556737 ADORA3P0DMS8 318 aa8.98□□□□□ -0.97
SHMT2-224ENST00000556737 FUT4P22083 530 aa8.98□□□□□ -0.97
SHMT2-224ENST00000556737 CALCRP30988 508 aa8.98□□□□□ -0.97
SHMT2-224ENST00000556737 RBM34P42696 430 aaKnown RBP8.98□□□□□ -0.97
SHMT2-224ENST00000556737 UBE2NP61088 152 aaKnown RBP8.98□□□□□ -0.97
SHMT2-224ENST00000556737 NAAAQ02083 359 aa8.98□□□□□ -0.97
SHMT2-224ENST00000556737 ZP4Q12836 540 aa8.98□□□□□ -0.97
SHMT2-224ENST00000556737 TNK1Q13470 666 aa8.98□□□□□ -0.97
SHMT2-224ENST00000556737 PIN1Q13526 163 aaPredicted RBP8.98□□□□□ -0.97
SHMT2-224ENST00000556737 RIPK1Q13546 671 aa8.98□□□□□ -0.97
SHMT2-224ENST00000556737 ETFDHQ16134 617 aa8.98□□□□□ -0.97
SHMT2-224ENST00000556737 CLEC12BQ2HXU8 276 aa8.98□□□□□ -0.97
SHMT2-224ENST00000556737 AGAP6Q5VW22 663 aa8.98□□□□□ -0.97
SHMT2-224ENST00000556737 CLEC9AQ6UXN8 241 aa8.98□□□□□ -0.97
SHMT2-224ENST00000556737 DEF8Q6ZN54 512 aa8.98□□□□□ -0.97
SHMT2-224ENST00000556737 Q71RC1 249 aaPredicted RBP8.98□□□□□ -0.97
SHMT2-224ENST00000556737 CBLL1Q75N03 491 aa8.98□□□□□ -0.97
SHMT2-224ENST00000556737 VTCN1Q7Z7D3 282 aa8.98□□□□□ -0.97
SHMT2-224ENST00000556737 ADGRG5Q8IZF4 528 aa8.98□□□□□ -0.97
SHMT2-224ENST00000556737 FAM86B1Q8N7N1 296 aa8.98□□□□□ -0.97
SHMT2-224ENST00000556737 FAM169BQ8N8A8 192 aa8.98□□□□□ -0.97
SHMT2-224ENST00000556737 TMEM54Q969K7 222 aa8.98□□□□□ -0.97
SHMT2-224ENST00000556737 TRMT61AQ96FX7 289 aaKnown RBP8.98□□□□□ -0.97
SHMT2-224ENST00000556737 PYURFQ96I23 114 aa8.98□□□□□ -0.97
SHMT2-224ENST00000556737 LRR1Q96L50 414 aa8.98□□□□□ -0.97
SHMT2-224ENST00000556737 CACNG6Q9BXT2 260 aa8.98□□□□□ -0.97
SHMT2-224ENST00000556737 RNPEPL1Q9HAU8 725 aa8.98□□□□□ -0.97
SHMT2-224ENST00000556737 ZNF224Q9NZL3 707 aa8.98□□□□□ -0.97
SHMT2-224ENST00000556737 ZNF229Q9UJW7 825 aa8.98□□□□□ -0.97
SHMT2-224ENST00000556737 ATP23Q9Y6H3 246 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms