RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-238	ENST00000556288	GRINA	Q7Z429	371 aa		4.13	□□□□□ -1.75
ATXN3-238	ENST00000556288	PATL1	Q86TB9	770 aa	Known RBP	4.13	□□□□□ -1.75
ATXN3-238	ENST00000556288	GPAT4	Q86UL3	456 aa		4.13	□□□□□ -1.75
ATXN3-238	ENST00000556288	RANBP3L	Q86VV4	465 aa	Predicted RBP	4.13	□□□□□ -1.75
ATXN3-238	ENST00000556288	TMEM200A	Q86VY9	491 aa		4.13	□□□□□ -1.75
ATXN3-238	ENST00000556288	PRIMA1	Q86XR5	153 aa		4.13	□□□□□ -1.75
ATXN3-238	ENST00000556288	SLC30A8	Q8IWU4	369 aa		4.13	□□□□□ -1.75
ATXN3-238	ENST00000556288	TUSC5	Q8IXB3	177 aa		4.13	□□□□□ -1.75
ATXN3-238	ENST00000556288	DPP10	Q8N608	796 aa		4.13	□□□□□ -1.75
ATXN3-238	ENST00000556288	METTL25	Q8N6Q8	603 aa		4.13	□□□□□ -1.75
ATXN3-238	ENST00000556288	RNF148	Q8N7C7	305 aa		4.13	□□□□□ -1.75
ATXN3-238	ENST00000556288	C11orf44	Q8N8P7	122 aa		4.13	□□□□□ -1.75
ATXN3-238	ENST00000556288	CCDC197	Q8NCU1	140 aa		4.13	□□□□□ -1.75
ATXN3-238	ENST00000556288	OR2T12	Q8NG77	320 aa		4.13	□□□□□ -1.75
ATXN3-238	ENST00000556288	RNF138	Q8WVD3	245 aa		4.13	□□□□□ -1.75
ATXN3-238	ENST00000556288	PROX1	Q92786	737 aa		4.13	□□□□□ -1.75
ATXN3-238	ENST00000556288	FAM162A	Q96A26	154 aa		4.13	□□□□□ -1.75
ATXN3-238	ENST00000556288	ZNF524	Q96C55	264 aa		4.13	□□□□□ -1.75
ATXN3-238	ENST00000556288	NTNG2	Q96CW9	530 aa		4.13	□□□□□ -1.75
ATXN3-238	ENST00000556288	NSL1	Q96IY1	281 aa		4.13	□□□□□ -1.75
ATXN3-238	ENST00000556288	MCHR1	Q99705	422 aa		4.13	□□□□□ -1.75
ATXN3-238	ENST00000556288	KCTD14	Q9BQ13	255 aa	Predicted RBP	4.13	□□□□□ -1.75
ATXN3-238	ENST00000556288	CCDC106	Q9BWC9	280 aa		4.13	□□□□□ -1.75
ATXN3-238	ENST00000556288	SRXN1	Q9BYN0	137 aa		4.13	□□□□□ -1.75
ATXN3-238	ENST00000556288	TRIM2	Q9C040	744 aa		4.13	□□□□□ -1.75
ATXN3-238	ENST00000556288	ZNF385D	Q9H6B1	395 aa		4.13	□□□□□ -1.75
ATXN3-238	ENST00000556288	MCCC2	Q9HCC0	563 aa		4.13	□□□□□ -1.75
ATXN3-238	ENST00000556288	BCL2L10	Q9HD36	194 aa		4.13	□□□□□ -1.75
ATXN3-238	ENST00000556288	PAQR5	Q9NXK6	330 aa	Predicted RBP	4.13	□□□□□ -1.75
ATXN3-238	ENST00000556288	TMEM181	Q9P2C4	612 aa		4.13	□□□□□ -1.75
ATXN3-238	ENST00000556288	ZNF629	Q9UEG4	869 aa	Predicted RBP	4.13	□□□□□ -1.75
ATXN3-238	ENST00000556288	CHRNA9	Q9UGM1	479 aa		4.13	□□□□□ -1.75
ATXN3-238	ENST00000556288	NDRG3	Q9UGV2	375 aa		4.13	□□□□□ -1.75
ATXN3-238	ENST00000556288	OSGIN1	Q9UJX0	560 aa		4.13	□□□□□ -1.75
ATXN3-238	ENST00000556288	KLF2	Q9Y5W3	355 aa	Predicted RBP	4.13	□□□□□ -1.75
ATXN3-238	ENST00000556288	COX11	Q9Y6N1	276 aa		4.13	□□□□□ -1.75
ATXN3-238	ENST00000556288	CRYBG3	Q68DQ2	2970 aa		4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	CENPE	Q02224	2701 aa		4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	COL12A1	Q99715	3063 aa		4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	TRBV5-3	A0A0A0MS03	114 aa		4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288		A0A1W2PNV4	684 aa		4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	CIB4	A0PJX0	185 aa		4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	ELOVL7	A1L3X0	281 aa		4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	MBD3L5	A6NJ08	208 aa	Predicted RBP	4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288		A8MVM7	634 aa		4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	SYT5	O00445	386 aa		4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	CXCR6	O00574	342 aa		4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	KPNA4	O00629	521 aa	Predicted RBP	4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	NDUFAB1	O14561	156 aa		4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	ADAMDEC1	O15204	470 aa		4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	SLC22A2	O15244	555 aa		4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	PROP1	O75360	226 aa		4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	SERPINI2	O75830	405 aa		4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	JTB	O76095	146 aa		4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	MFN2	O95140	757 aa		4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	AKR7A3	O95154	331 aa		4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	OR6A2	O95222	327 aa		4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	AHSA1	O95433	338 aa		4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	IGHV3-9	P01782	118 aa		4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	HIST1H2AB	P04908	130 aa		4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	GPI	P06744	558 aa		4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	YES1	P07947	543 aa		4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	GUSB	P08236	651 aa		4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	UMPS	P11172	480 aa		4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	NQO1	P15559	274 aa	Known RBP	4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	CDH2	P19022	906 aa	Predicted RBP	4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	KLK2	P20151	261 aa		4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	TNFRSF1B	P20333	461 aa		4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	AHCY	P23526	432 aa		4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	PSMA4	P25789	261 aa	Known RBP	4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	IFNA8	P32881	189 aa		4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	PCGF2	P35227	344 aa		4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	IDUA	P35475	653 aa		4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	ACAA2	P42765	397 aa	Known RBP	4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	OR1E2	P47887	323 aa		4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	SLC7A2	P52569	658 aa		4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	DLX5	P56178	289 aa		4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	TAS2R41	P59536	307 aa		4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	SUMO2	P61956	95 aa	Known RBP	4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	TLE4	Q04727	773 aa		4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	FAM27E3	Q08E93	113 aa		4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	RBBP4	Q09028	425 aa		4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	C1D	Q13901	141 aa	Known RBP	4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	RNPS1	Q15287	305 aa	Known RBP	4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	TSC22D1	Q15714	1073 aa		4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	DUSP7	Q16829	419 aa		4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	TMEM44	Q2T9K0	475 aa		4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	CTU2	Q2VPK5	515 aa	Known RBP	4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	CYBRD1	Q53TN4	286 aa		4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	SYT14P1	Q58G82	188 aa		4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	ALG10B	Q5I7T1	473 aa		4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	ENTPD8	Q5MY95	495 aa		4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	OTUD3	Q5T2D3	398 aa	Predicted RBP	4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	EEF1A1P5	Q5VTE0	462 aa		4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	C9orf135	Q5VTT2	229 aa		4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	PRAMEF8	Q5VWM4	474 aa		4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	PRAMEF7	Q5VXH5	474 aa		4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	SUMO4	Q6EEV6	95 aa		4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	GLYAT	Q6IB77	296 aa		4.12	□□□□□ -1.75
ATXN3-238	ENST00000556288	C3orf33	Q6P1S2	294 aa		4.12	□□□□□ -1.75

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