RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 PBLDP30039 288 aaPredicted RBP1.78□□□□□ -2.12
SCFD1-218ENST00000556256 SUB1P53999 127 aaKnown RBP eCLIP1.78□□□□□ -2.12
SCFD1-218ENST00000556256 KCNJ2P63252 427 aa1.78□□□□□ -2.12
SCFD1-218ENST00000556256 LCN12Q6JVE5 192 aa1.78□□□□□ -2.12
SCFD1-218ENST00000556256 LYPD2Q6UXB3 125 aa1.78□□□□□ -2.12
SCFD1-218ENST00000556256 KDM7AQ6ZMT4 941 aa1.78□□□□□ -2.12
SCFD1-218ENST00000556256 LRRC74BQ6ZQY2 392 aa1.78□□□□□ -2.12
SCFD1-218ENST00000556256 C6orf120Q7Z4R8 191 aa1.78□□□□□ -2.12
SCFD1-218ENST00000556256 TMEM135Q86UB9 458 aa1.78□□□□□ -2.12
SCFD1-218ENST00000556256 NBPF5PQ86XG9 351 aaPredicted RBP1.78□□□□□ -2.12
SCFD1-218ENST00000556256 UBE2J2Q8N2K1 259 aa1.78□□□□□ -2.12
SCFD1-218ENST00000556256 NECAB1Q8N987 351 aa1.78□□□□□ -2.12
SCFD1-218ENST00000556256 PLPPR1Q8TBJ4 325 aa1.78□□□□□ -2.12
SCFD1-218ENST00000556256 DTX3LQ8TDB6 740 aa1.78□□□□□ -2.12
SCFD1-218ENST00000556256 TMEM158Q8WZ71 300 aa1.78□□□□□ -2.12
SCFD1-218ENST00000556256 STARD4Q96DR4 205 aa1.78□□□□□ -2.12
SCFD1-218ENST00000556256 ASB9Q96DX5 294 aa1.78□□□□□ -2.12
SCFD1-218ENST00000556256 AURKBQ96GD4 344 aaPredicted RBP1.78□□□□□ -2.12
SCFD1-218ENST00000556256 TMEM59Q9BXS4 323 aa1.78□□□□□ -2.12
SCFD1-218ENST00000556256 CTPS2Q9NRF8 586 aa1.78□□□□□ -2.12
SCFD1-218ENST00000556256 ETNK2Q9NVF9 386 aa1.78□□□□□ -2.12
SCFD1-218ENST00000556256 ZNF226Q9NYT6 803 aa1.78□□□□□ -2.12
SCFD1-218ENST00000556256 GNPTGQ9UJJ9 305 aa1.78□□□□□ -2.12
SCFD1-218ENST00000556256 IKZF2Q9UKS7 526 aa1.78□□□□□ -2.12
SCFD1-218ENST00000556256 PACSIN2Q9UNF0 486 aaPredicted RBP1.78□□□□□ -2.12
SCFD1-218ENST00000556256 CSDC2Q9Y534 153 aaKnown RBP1.78□□□□□ -2.12
SCFD1-218ENST00000556256 IKBKGQ9Y6K9 419 aa1.78□□□□□ -2.12
SCFD1-218ENST00000556256 MSH6P52701 1360 aa1.77□□□□□ -2.13
SCFD1-218ENST00000556256 MAP3K15Q6ZN16 1313 aa1.77□□□□□ -2.13
SCFD1-218ENST00000556256 A0A096LNJ9 63 aa1.77□□□□□ -2.13
SCFD1-218ENST00000556256 PLAC8L1A1L4L8 177 aa1.77□□□□□ -2.13
SCFD1-218ENST00000556256 LAD1O00515 517 aa1.77□□□□□ -2.13
SCFD1-218ENST00000556256 MPHOSPH10O00566 681 aaKnown RBP1.77□□□□□ -2.13
SCFD1-218ENST00000556256 SUPT3HO75486 399 aa1.77□□□□□ -2.13
SCFD1-218ENST00000556256 SNX4O95219 450 aa1.77□□□□□ -2.13
SCFD1-218ENST00000556256 BGLAPP02818 100 aa1.77□□□□□ -2.13
SCFD1-218ENST00000556256 CSF3P09919 207 aa1.77□□□□□ -2.13
SCFD1-218ENST00000556256 UQCRFS1P1P0C7P4 283 aa1.77□□□□□ -2.13
SCFD1-218ENST00000556256 SMIM10L1P0DMW3 83 aa1.77□□□□□ -2.13
SCFD1-218ENST00000556256 ADRB3P13945 408 aa1.77□□□□□ -2.13
SCFD1-218ENST00000556256 ZNF30P17039 623 aa1.77□□□□□ -2.13
SCFD1-218ENST00000556256 HNRNPH3P31942 346 aaKnown RBP1.77□□□□□ -2.13
SCFD1-218ENST00000556256 CASP14P31944 242 aa1.77□□□□□ -2.13
SCFD1-218ENST00000556256 RORAP35398 523 aa1.77□□□□□ -2.13
SCFD1-218ENST00000556256 ATP5C1P36542 298 aaKnown RBP1.77□□□□□ -2.13
SCFD1-218ENST00000556256 SLC26A3P40879 764 aa1.77□□□□□ -2.13
SCFD1-218ENST00000556256 NMUP48645 174 aa1.77□□□□□ -2.13
SCFD1-218ENST00000556256 CCR6P51684 374 aa1.77□□□□□ -2.13
SCFD1-218ENST00000556256 CCR8P51685 355 aa1.77□□□□□ -2.13
SCFD1-218ENST00000556256 SUCLG1P53597 346 aaKnown RBP1.77□□□□□ -2.13
SCFD1-218ENST00000556256 GPX6P59796 221 aa1.77□□□□□ -2.13
SCFD1-218ENST00000556256 ZNF92Q03936 586 aa1.77□□□□□ -2.13
SCFD1-218ENST00000556256 LRRC63Q05C16 580 aa1.77□□□□□ -2.13
SCFD1-218ENST00000556256 LRRC74AQ0VAA2 488 aa1.77□□□□□ -2.13
SCFD1-218ENST00000556256 MADCAM1Q13477 382 aa1.77□□□□□ -2.13
SCFD1-218ENST00000556256 ARHGAP19Q14CB8 494 aa1.77□□□□□ -2.13
SCFD1-218ENST00000556256 SSX2Q16385 188 aa1.77□□□□□ -2.13
SCFD1-218ENST00000556256 RFX4Q33E94 735 aa1.77□□□□□ -2.13
SCFD1-218ENST00000556256 PIGGQ5H8A4 983 aa1.77□□□□□ -2.13
SCFD1-218ENST00000556256 AGBL2Q5U5Z8 902 aa1.77□□□□□ -2.13
SCFD1-218ENST00000556256 CNIH2Q6PI25 160 aa1.77□□□□□ -2.13
SCFD1-218ENST00000556256 ZYG11AQ6WRX3 759 aa1.77□□□□□ -2.13
SCFD1-218ENST00000556256 FAM228AQ86W67 206 aa1.77□□□□□ -2.13
SCFD1-218ENST00000556256 SLC22A9Q8IVM8 553 aa1.77□□□□□ -2.13
SCFD1-218ENST00000556256 MS4A15Q8N5U1 240 aa1.77□□□□□ -2.13
SCFD1-218ENST00000556256 MARCH1Q8TCQ1 289 aa1.77□□□□□ -2.13
SCFD1-218ENST00000556256 SLC2A14Q8TDB8 520 aa1.77□□□□□ -2.13
SCFD1-218ENST00000556256 CD300LFQ8TDQ1 290 aa1.77□□□□□ -2.13
SCFD1-218ENST00000556256 TMEM54Q969K7 222 aa1.77□□□□□ -2.13
SCFD1-218ENST00000556256 SGK3Q96BR1 496 aa1.77□□□□□ -2.13
SCFD1-218ENST00000556256 SMIM10Q96HG1 83 aa1.77□□□□□ -2.13
SCFD1-218ENST00000556256 TPD52L3Q96J77 140 aa1.77□□□□□ -2.13
SCFD1-218ENST00000556256 HSFY1Q96LI6 401 aa1.77□□□□□ -2.13
SCFD1-218ENST00000556256 WFIKKN1Q96NZ8 548 aa1.77□□□□□ -2.13
SCFD1-218ENST00000556256 RARRES2Q99969 163 aa1.77□□□□□ -2.13
SCFD1-218ENST00000556256 GPR61Q9BZJ8 451 aa1.77□□□□□ -2.13
SCFD1-218ENST00000556256 PKIBQ9C010 78 aa1.77□□□□□ -2.13
SCFD1-218ENST00000556256 CDC42EP4Q9H3Q1 356 aaKnown RBP1.77□□□□□ -2.13
SCFD1-218ENST00000556256 CLMPQ9H6B4 373 aa1.77□□□□□ -2.13
SCFD1-218ENST00000556256 CWH43Q9H720 699 aa1.77□□□□□ -2.13
SCFD1-218ENST00000556256 KLHL28Q9NXS3 571 aa1.77□□□□□ -2.13
SCFD1-218ENST00000556256 RAB26Q9ULW5 256 aa1.77□□□□□ -2.13
SCFD1-218ENST00000556256 HEBP2Q9Y5Z4 205 aa1.77□□□□□ -2.13
SCFD1-218ENST00000556256 FBN1P35555 2871 aaKnown RBP1.77□□□□□ -2.13
SCFD1-218ENST00000556256 WDR62O43379 1518 aa1.76□□□□□ -2.13
SCFD1-218ENST00000556256 CEMIPQ8WUJ3 1361 aa1.76□□□□□ -2.13
SCFD1-218ENST00000556256 UBXN8O00124 270 aa1.76□□□□□ -2.13
SCFD1-218ENST00000556256 GOSR2O14653 212 aa1.76□□□□□ -2.13
SCFD1-218ENST00000556256 SOX15O60248 233 aa1.76□□□□□ -2.13
SCFD1-218ENST00000556256 DFNA5O60443 496 aa1.76□□□□□ -2.13
SCFD1-218ENST00000556256 WISP3O95389 354 aaPredicted RBP1.76□□□□□ -2.13
SCFD1-218ENST00000556256 C6orf47O95873 294 aa1.76□□□□□ -2.13
SCFD1-218ENST00000556256 SERPIND1P05546 499 aa1.76□□□□□ -2.13
SCFD1-218ENST00000556256 ZDHHC11BP0C7U3 371 aa1.76□□□□□ -2.13
SCFD1-218ENST00000556256 PNMA6AP0CW24 399 aaPredicted RBP1.76□□□□□ -2.13
SCFD1-218ENST00000556256 OMGP23515 440 aa1.76□□□□□ -2.13
SCFD1-218ENST00000556256 CXCL5P42830 114 aa1.76□□□□□ -2.13
SCFD1-218ENST00000556256 RFX3P48380 749 aa1.76□□□□□ -2.13
SCFD1-218ENST00000556256 NCBP2P52298 156 aaKnown RBP eCLIP1.76□□□□□ -2.13
SCFD1-218ENST00000556256 UGT2B15P54855 530 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms