RNA–Protein interactions for RNA: ENST00000555774.5

SHMT2-222, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 2,311 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-222ENST00000555774 BGLAPP02818 100 aa12.23□□□□□ -0.45
SHMT2-222ENST00000555774 GIPP09681 153 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-222ENST00000555774 MAGEB1P43366 347 aa12.23□□□□□ -0.45
SHMT2-222ENST00000555774 ZNF81P51508 661 aa12.23□□□□□ -0.45
SHMT2-222ENST00000555774 CLLU1Q5K131 121 aa12.23□□□□□ -0.45
SHMT2-222ENST00000555774 TMPRSS12Q86WS5 348 aa12.23□□□□□ -0.45
SHMT2-222ENST00000555774 TMEM151BQ8IW70 566 aa12.23□□□□□ -0.45
SHMT2-222ENST00000555774 METTL27Q8N6F8 245 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-222ENST00000555774 UXS1Q8NBZ7 420 aa12.23□□□□□ -0.45
SHMT2-222ENST00000555774 ASB17Q8WXJ9 295 aa12.23□□□□□ -0.45
SHMT2-222ENST00000555774 DCBLD2Q96PD2 775 aa12.23□□□□□ -0.45
SHMT2-222ENST00000555774 RAB33BQ9H082 229 aa12.23□□□□□ -0.45
SHMT2-222ENST00000555774 METTL17Q9H7H0 456 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-222ENST00000555774 UBQLN2Q9UHD9 624 aa12.23□□□□□ -0.45
SHMT2-222ENST00000555774 TRANK1O15050 2925 aa12.23□□□□□ -0.45
SHMT2-222ENST00000555774 G3V3Q6 166 aa12.23□□□□□ -0.45
SHMT2-222ENST00000555774 DCTN6O00399 190 aa12.23□□□□□ -0.45
SHMT2-222ENST00000555774 SHOXO15266 292 aa12.23□□□□□ -0.45
SHMT2-222ENST00000555774 ICMTO60725 284 aa12.23□□□□□ -0.45
SHMT2-222ENST00000555774 AKR7A3O95154 331 aa12.23□□□□□ -0.45
SHMT2-222ENST00000555774 CRYZL1O95825 349 aa12.23□□□□□ -0.45
SHMT2-222ENST00000555774 MT-ATP6P00846 226 aa12.23□□□□□ -0.45
SHMT2-222ENST00000555774 IGKV3-11P04433 115 aa12.23□□□□□ -0.45
SHMT2-222ENST00000555774 CSRP1P21291 193 aaKnown RBP12.23□□□□□ -0.45
SHMT2-222ENST00000555774 SOX2P48431 317 aa12.23□□□□□ -0.45
SHMT2-222ENST00000555774 SELENOPP49908 381 aa12.23□□□□□ -0.45
SHMT2-222ENST00000555774 Q6ZTK2 550 aa12.23□□□□□ -0.45
SHMT2-222ENST00000555774 GLB1L2Q8IW92 636 aa12.23□□□□□ -0.45
SHMT2-222ENST00000555774 OR8H3Q8N146 312 aa12.23□□□□□ -0.45
SHMT2-222ENST00000555774 GCDHQ92947 438 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-222ENST00000555774 TAAR8Q969N4 342 aa12.23□□□□□ -0.45
SHMT2-222ENST00000555774 ADIPOR1Q96A54 375 aa12.23□□□□□ -0.45
SHMT2-222ENST00000555774 MVB12AQ96EY5 273 aa12.23□□□□□ -0.45
SHMT2-222ENST00000555774 C4orf45Q96LM5 186 aa12.23□□□□□ -0.45
SHMT2-222ENST00000555774 PNO1Q9NRX1 252 aaKnown RBP12.23□□□□□ -0.45
SHMT2-222ENST00000555774 ZNF346Q9UL40 294 aaKnown RBP12.23□□□□□ -0.45
SHMT2-222ENST00000555774 IGKV3D-11A0A0A0MRZ8 115 aa12.22□□□□□ -0.45
SHMT2-222ENST00000555774 TVP23AA6NH52 213 aa12.22□□□□□ -0.45
SHMT2-222ENST00000555774 CREBL2O60519 120 aaPredicted RBP12.22□□□□□ -0.45
SHMT2-222ENST00000555774 NME1P15531 152 aaKnown RBP12.22□□□□□ -0.45
SHMT2-222ENST00000555774 CXCR1P25024 350 aa12.22□□□□□ -0.45
SHMT2-222ENST00000555774 DMWDQ09019 674 aa12.22□□□□□ -0.45
SHMT2-222ENST00000555774 TOMM20Q15388 145 aa12.22□□□□□ -0.45
SHMT2-222ENST00000555774 ZNF626Q68DY1 528 aa12.22□□□□□ -0.45
SHMT2-222ENST00000555774 HDDC2Q7Z4H3 204 aa12.22□□□□□ -0.45
SHMT2-222ENST00000555774 ELMOD2Q8IZ81 293 aa12.22□□□□□ -0.45
SHMT2-222ENST00000555774 SIX5Q8N196 739 aa12.22□□□□□ -0.45
SHMT2-222ENST00000555774 OTOSQ8NHW6 89 aa12.22□□□□□ -0.45
SHMT2-222ENST00000555774 MCHR2Q969V1 340 aa12.22□□□□□ -0.45
SHMT2-222ENST00000555774 BEX1Q9HBH7 125 aa12.22□□□□□ -0.45
SHMT2-222ENST00000555774 SLC17A5Q9NRA2 495 aa12.22□□□□□ -0.45
SHMT2-222ENST00000555774 XKRYO14609 159 aa12.22□□□□□ -0.45
SHMT2-222ENST00000555774 CSF1P09603 554 aa12.22□□□□□ -0.45
SHMT2-222ENST00000555774 RAD52P43351 418 aa12.22□□□□□ -0.45
SHMT2-222ENST00000555774 RAP2BP61225 183 aa12.22□□□□□ -0.45
SHMT2-222ENST00000555774 ZNF117Q03924 483 aa12.22□□□□□ -0.45
SHMT2-222ENST00000555774 CBFBQ13951 182 aa12.22□□□□□ -0.45
SHMT2-222ENST00000555774 LINC00303Q3SY05 128 aa12.22□□□□□ -0.45
SHMT2-222ENST00000555774 STPG1Q5TH74 334 aa12.22□□□□□ -0.45
SHMT2-222ENST00000555774 SLC25A25Q6KCM7 469 aa12.22□□□□□ -0.45
SHMT2-222ENST00000555774 ANKRD16Q6P6B7 361 aa12.22□□□□□ -0.45
SHMT2-222ENST00000555774 MAMDC2Q7Z304 686 aaPredicted RBP12.22□□□□□ -0.45
SHMT2-222ENST00000555774 DPY19L4Q7Z388 723 aa12.22□□□□□ -0.45
SHMT2-222ENST00000555774 C17orf82Q86X59 251 aaPredicted RBP12.22□□□□□ -0.45
SHMT2-222ENST00000555774 MEIOBQ8N635 442 aa12.22□□□□□ -0.45
SHMT2-222ENST00000555774 THEM6Q8WUY1 208 aa12.22□□□□□ -0.45
SHMT2-222ENST00000555774 TMEM106AQ96A25 262 aa12.22□□□□□ -0.45
SHMT2-222ENST00000555774 OR8B4Q96RC9 309 aa12.22□□□□□ -0.45
SHMT2-222ENST00000555774 DPCDQ9BVM2 203 aaPredicted RBP12.22□□□□□ -0.45
SHMT2-222ENST00000555774 TMPRSS13Q9BYE2 586 aa12.22□□□□□ -0.45
SHMT2-222ENST00000555774 SLC2A4RGQ9NR83 387 aa12.22□□□□□ -0.45
SHMT2-222ENST00000555774 MGAT4CQ9UBM8 478 aa12.22□□□□□ -0.45
SHMT2-222ENST00000555774 F5P12259 2224 aa12.21□□□□□ -0.45
SHMT2-222ENST00000555774 H7C1C5 153 aa12.21□□□□□ -0.45
SHMT2-222ENST00000555774 H7C417 338 aa12.21□□□□□ -0.45
SHMT2-222ENST00000555774 TO15178 435 aa12.21□□□□□ -0.45
SHMT2-222ENST00000555774 ICOSLGO75144 302 aa12.21□□□□□ -0.45
SHMT2-222ENST00000555774 RBBP9O75884 186 aa12.21□□□□□ -0.45
SHMT2-222ENST00000555774 ITPKBP27987 946 aa12.21□□□□□ -0.45
SHMT2-222ENST00000555774 IL12BP29460 328 aa12.21□□□□□ -0.45
SHMT2-222ENST00000555774 LCN6P62502 163 aa12.21□□□□□ -0.45
SHMT2-222ENST00000555774 SSBP1Q04837 148 aaKnown RBP12.21□□□□□ -0.45
SHMT2-222ENST00000555774 PUDPQ08623 228 aa12.21□□□□□ -0.45
SHMT2-222ENST00000555774 EXOSC2Q13868 293 aaKnown RBP12.21□□□□□ -0.45
SHMT2-222ENST00000555774 ELAVL1Q15717 326 aaKnown RBP12.21□□□□□ -0.45
SHMT2-222ENST00000555774 SGCBQ16585 318 aa12.21□□□□□ -0.45
SHMT2-222ENST00000555774 PRSS35Q8N3Z0 413 aa12.21□□□□□ -0.45
SHMT2-222ENST00000555774 FTMTQ8N4E7 242 aa12.21□□□□□ -0.45
SHMT2-222ENST00000555774 ZNF321PQ8N8H1 164 aa12.21□□□□□ -0.45
SHMT2-222ENST00000555774 DNAAF1Q8NEP3 725 aa12.21□□□□□ -0.45
SHMT2-222ENST00000555774 ZNF721Q8TF20 911 aa12.21□□□□□ -0.45
SHMT2-222ENST00000555774 TGM7Q96PF1 710 aa12.21□□□□□ -0.45
SHMT2-222ENST00000555774 ADOQ96SZ5 270 aa12.21□□□□□ -0.45
SHMT2-222ENST00000555774 OR8D2Q9GZM6 311 aa12.21□□□□□ -0.45
SHMT2-222ENST00000555774 SYT4Q9H2B2 425 aa12.21□□□□□ -0.45
SHMT2-222ENST00000555774 CUTCQ9NTM9 273 aa12.21□□□□□ -0.45
SHMT2-222ENST00000555774 GLTPQ9NZD2 209 aa12.21□□□□□ -0.45
SHMT2-222ENST00000555774 MTFP1Q9UDX5 166 aa12.21□□□□□ -0.45
SHMT2-222ENST00000555774 MAB21L2Q9Y586 359 aa12.21□□□□□ -0.45
SHMT2-222ENST00000555774 TRAV8-7A0A075B6U6 113 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms