RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 PRRC2CQ9Y520 2896 aaKnown RBP9.96□□□□□ -0.81
SHMT2-220ENST00000555634 TRGV8A0A0C4DH27 118 aa9.96□□□□□ -0.82
SHMT2-220ENST00000555634 SLC35F4A4IF30 521 aa9.96□□□□□ -0.82
SHMT2-220ENST00000555634 MBD3L4A6NDZ8 208 aaPredicted RBP9.96□□□□□ -0.82
SHMT2-220ENST00000555634 MBD3L3A6NE82 208 aaPredicted RBP9.96□□□□□ -0.82
SHMT2-220ENST00000555634 MBD3L5A6NJ08 208 aaPredicted RBP9.96□□□□□ -0.82
SHMT2-220ENST00000555634 ZNF716A6NP11 495 aa9.96□□□□□ -0.82
SHMT2-220ENST00000555634 HSPB2A8KAH6 182 aa9.96□□□□□ -0.82
SHMT2-220ENST00000555634 ZNF587BE7ETH6 402 aa9.96□□□□□ -0.82
SHMT2-220ENST00000555634 FAM20BO75063 409 aa9.96□□□□□ -0.82
SHMT2-220ENST00000555634 AQP8O94778 261 aa9.96□□□□□ -0.82
SHMT2-220ENST00000555634 CLIC3O95833 236 aa9.96□□□□□ -0.82
SHMT2-220ENST00000555634 HLA-DQA2P01906 255 aa9.96□□□□□ -0.82
SHMT2-220ENST00000555634 GNAO1P09471 354 aa9.96□□□□□ -0.82
SHMT2-220ENST00000555634 TMIGD3P0DMS9 266 aaPredicted RBP9.96□□□□□ -0.82
SHMT2-220ENST00000555634 EPHA2P29317 976 aa9.96□□□□□ -0.82
SHMT2-220ENST00000555634 CDH11P55287 796 aa9.96□□□□□ -0.82
SHMT2-220ENST00000555634 GLO1Q04760 184 aa9.96□□□□□ -0.82
SHMT2-220ENST00000555634 TMED1Q13445 227 aa9.96□□□□□ -0.82
SHMT2-220ENST00000555634 CRMP1Q14194 572 aa9.96□□□□□ -0.82
SHMT2-220ENST00000555634 MAD2L1BPQ15013 274 aaPredicted RBP9.96□□□□□ -0.82
SHMT2-220ENST00000555634 HSPB2Q16082 182 aa9.96□□□□□ -0.82
SHMT2-220ENST00000555634 SLC35D3Q5M8T2 416 aa9.96□□□□□ -0.82
SHMT2-220ENST00000555634 THEM4Q5T1C6 240 aa9.96□□□□□ -0.82
SHMT2-220ENST00000555634 CARD17Q5XLA6 110 aa9.96□□□□□ -0.82
SHMT2-220ENST00000555634 ACSM5Q6NUN0 579 aa9.96□□□□□ -0.82
SHMT2-220ENST00000555634 PLBD1Q6P4A8 553 aa9.96□□□□□ -0.82
SHMT2-220ENST00000555634 ENTHD1Q8IYW4 607 aa9.96□□□□□ -0.82
SHMT2-220ENST00000555634 ZNF786Q8N393 782 aa9.96□□□□□ -0.82
SHMT2-220ENST00000555634 MARVELD2Q8N4S9 558 aa9.96□□□□□ -0.82
SHMT2-220ENST00000555634 SLC37A3Q8NCC5 494 aa9.96□□□□□ -0.82
SHMT2-220ENST00000555634 OR6K6Q8NGW6 343 aa9.96□□□□□ -0.82
SHMT2-220ENST00000555634 OR6K3Q8NGY3 331 aa9.96□□□□□ -0.82
SHMT2-220ENST00000555634 MBD3L2Q8NHZ7 208 aaPredicted RBP9.96□□□□□ -0.82
SHMT2-220ENST00000555634 MRPL48Q96GC5 212 aaKnown RBP9.96□□□□□ -0.82
SHMT2-220ENST00000555634 NMNAT3Q96T66 252 aa9.96□□□□□ -0.82
SHMT2-220ENST00000555634 SFXN3Q9BWM7 321 aa9.96□□□□□ -0.82
SHMT2-220ENST00000555634 SLCO5A1Q9H2Y9 848 aa9.96□□□□□ -0.82
SHMT2-220ENST00000555634 RERGLQ9H628 205 aa9.96□□□□□ -0.82
SHMT2-220ENST00000555634 CCNB1IP1Q9NPC3 277 aa9.96□□□□□ -0.82
SHMT2-220ENST00000555634 RPRD1BQ9NQG5 326 aaKnown RBP9.96□□□□□ -0.82
SHMT2-220ENST00000555634 SH3BGRL2Q9UJC5 107 aa9.96□□□□□ -0.82
SHMT2-220ENST00000555634 MOKQ9UQ07 419 aa9.96□□□□□ -0.82
SHMT2-220ENST00000555634 RNF6Q9Y252 685 aa9.96□□□□□ -0.82
SHMT2-220ENST00000555634 GPR52Q9Y2T5 361 aa9.96□□□□□ -0.82
SHMT2-220ENST00000555634 TPRKBQ9Y3C4 175 aa9.96□□□□□ -0.82
SHMT2-220ENST00000555634 RPL36Q9Y3U8 105 aaKnown RBP9.96□□□□□ -0.82
SHMT2-220ENST00000555634 SHANK1Q9Y566 2161 aa9.95□□□□□ -0.82
SHMT2-220ENST00000555634 ZNF814B7Z6K7 855 aa9.95□□□□□ -0.82
SHMT2-220ENST00000555634 PRKYO43930 277 aa9.95□□□□□ -0.82
SHMT2-220ENST00000555634 TRMUO75648 421 aaKnown RBP9.95□□□□□ -0.82
SHMT2-220ENST00000555634 TNFAIP8O95379 198 aa9.95□□□□□ -0.82
SHMT2-220ENST00000555634 PGA4P0DJD7 388 aa9.95□□□□□ -0.82
SHMT2-220ENST00000555634 PGA3P0DJD8 388 aa9.95□□□□□ -0.82
SHMT2-220ENST00000555634 HLA-DOBP13765 273 aa9.95□□□□□ -0.82
SHMT2-220ENST00000555634 HOXC12P31275 282 aa9.95□□□□□ -0.82
SHMT2-220ENST00000555634 TIMP3P35625 211 aa9.95□□□□□ -0.82
SHMT2-220ENST00000555634 SLC25A1P53007 311 aa9.95□□□□□ -0.82
SHMT2-220ENST00000555634 SH3BGRP55822 239 aaPredicted RBP9.95□□□□□ -0.82
SHMT2-220ENST00000555634 SIRPAP78324 504 aa9.95□□□□□ -0.82
SHMT2-220ENST00000555634 CAMK2DQ13557 499 aa9.95□□□□□ -0.82
SHMT2-220ENST00000555634 RBM48Q5RL73 367 aaKnown RBP9.95□□□□□ -0.82
SHMT2-220ENST00000555634 PCSK4Q6UW60 755 aa9.95□□□□□ -0.82
SHMT2-220ENST00000555634 USP51Q70EK9 711 aa9.95□□□□□ -0.82
SHMT2-220ENST00000555634 FAM214BQ7L5A3 538 aa9.95□□□□□ -0.82
SHMT2-220ENST00000555634 ADGRE4PQ86SQ3 457 aa9.95□□□□□ -0.82
SHMT2-220ENST00000555634 CPOQ8IVL8 374 aa9.95□□□□□ -0.82
SHMT2-220ENST00000555634 TUSC5Q8IXB3 177 aa9.95□□□□□ -0.82
SHMT2-220ENST00000555634 GCNT2Q8N0V5 402 aa9.95□□□□□ -0.82
SHMT2-220ENST00000555634 FAM26EQ8N5C1 309 aa9.95□□□□□ -0.82
SHMT2-220ENST00000555634 SYT14Q8NB59 555 aa9.95□□□□□ -0.82
SHMT2-220ENST00000555634 CYB561A3Q8NBI2 242 aa9.95□□□□□ -0.82
SHMT2-220ENST00000555634 OR10H5Q8NGA6 315 aa9.95□□□□□ -0.82
SHMT2-220ENST00000555634 LRRC46Q96FV0 321 aa9.95□□□□□ -0.82
SHMT2-220ENST00000555634 OR2M2Q96R28 347 aa9.95□□□□□ -0.82
SHMT2-220ENST00000555634 EMC6Q9BV81 110 aa9.95□□□□□ -0.82
SHMT2-220ENST00000555634 ENKD1Q9H0I2 346 aa9.95□□□□□ -0.82
SHMT2-220ENST00000555634 SYT4Q9H2B2 425 aa9.95□□□□□ -0.82
SHMT2-220ENST00000555634 OR51V1Q9H2C8 321 aa9.95□□□□□ -0.82
SHMT2-220ENST00000555634 C12orf49Q9H741 205 aa9.95□□□□□ -0.82
SHMT2-220ENST00000555634 DNAJC27Q9NZQ0 273 aa9.95□□□□□ -0.82
SHMT2-220ENST00000555634 VSX1Q9NZR4 365 aaPredicted RBP9.95□□□□□ -0.82
SHMT2-220ENST00000555634 WARS2Q9UGM6 360 aaKnown RBP9.95□□□□□ -0.82
SHMT2-220ENST00000555634 PROCRQ9UNN8 238 aa9.95□□□□□ -0.82
SHMT2-220ENST00000555634 MYRFQ9Y2G1 1151 aa9.95□□□□□ -0.82
SHMT2-220ENST00000555634 ZNF835Q9Y2P0 537 aa9.95□□□□□ -0.82
SHMT2-220ENST00000555634 POLR1DQ9Y2S0 133 aa9.95□□□□□ -0.82
SHMT2-220ENST00000555634 LRRC42Q9Y546 428 aa9.95□□□□□ -0.82
SHMT2-220ENST00000555634 PCDHGB1Q9Y5G3 927 aa9.95□□□□□ -0.82
SHMT2-220ENST00000555634 FKBP7Q9Y680 259 aa9.95□□□□□ -0.82
SHMT2-220ENST00000555634 ZZEF1O43149 2961 aa9.95□□□□□ -0.82
SHMT2-220ENST00000555634 BOD1L1Q8NFC6 3051 aa9.95□□□□□ -0.82
SHMT2-220ENST00000555634 A0A1B0GUH1 482 aa9.94□□□□□ -0.82
SHMT2-220ENST00000555634 A0A1W2PPL8 197 aa9.94□□□□□ -0.82
SHMT2-220ENST00000555634 EFCAB10A6NFE3 127 aa9.94□□□□□ -0.82
SHMT2-220ENST00000555634 FAM183AA6NL82 134 aa9.94□□□□□ -0.82
SHMT2-220ENST00000555634 KDM4EB2RXH2 506 aaPredicted RBP9.94□□□□□ -0.82
SHMT2-220ENST00000555634 E9PLN8 166 aa9.94□□□□□ -0.82
SHMT2-220ENST00000555634 H7C1C5 153 aa9.94□□□□□ -0.82
SHMT2-220ENST00000555634 M0R129 80 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms