RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 MYDGFQ969H8 173 aa9.1□□□□□ -0.95
NEK9-205ENST00000555405 INTS12Q96CB8 462 aaKnown RBP9.1□□□□□ -0.95
NEK9-205ENST00000555405 OXGR1Q96P68 337 aa9.1□□□□□ -0.95
NEK9-205ENST00000555405 ALG12Q9BV10 488 aa9.1□□□□□ -0.95
NEK9-205ENST00000555405 MARCH7Q9H992 704 aa9.1□□□□□ -0.95
NEK9-205ENST00000555405 ASF1BQ9NVP2 202 aa9.1□□□□□ -0.95
NEK9-205ENST00000555405 PCDHGB6Q9Y5F9 930 aa9.1□□□□□ -0.95
NEK9-205ENST00000555405 PCDHGA9Q9Y5G4 932 aaKnown RBP9.1□□□□□ -0.95
NEK9-205ENST00000555405 CEACAM4O75871 244 aa9.09□□□□□ -0.95
NEK9-205ENST00000555405 HPNP05981 417 aa9.09□□□□□ -0.95
NEK9-205ENST00000555405 SPARCP09486 303 aa9.09□□□□□ -0.95
NEK9-205ENST00000555405 SPI1P17947 270 aa9.09□□□□□ -0.95
NEK9-205ENST00000555405 GSTT1P30711 240 aa9.09□□□□□ -0.95
NEK9-205ENST00000555405 NFATC3Q12968 1075 aa9.09□□□□□ -0.95
NEK9-205ENST00000555405 ODF4Q2M2E3 257 aa9.09□□□□□ -0.95
NEK9-205ENST00000555405 CORO6Q6QEF8 472 aa9.09□□□□□ -0.95
NEK9-205ENST00000555405 Q6ZS92 163 aa9.09□□□□□ -0.95
NEK9-205ENST00000555405 LINC00346Q8IVM7 164 aa9.09□□□□□ -0.95
NEK9-205ENST00000555405 FAM26EQ8N5C1 309 aa9.09□□□□□ -0.95
NEK9-205ENST00000555405 ZNF566Q969W8 418 aa9.09□□□□□ -0.95
NEK9-205ENST00000555405 ALKBH3Q96Q83 286 aaPredicted RBP9.09□□□□□ -0.95
NEK9-205ENST00000555405 CENPMQ9NSP4 180 aa9.09□□□□□ -0.95
NEK9-205ENST00000555405 IKZF2Q9UKS7 526 aa9.09□□□□□ -0.95
NEK9-205ENST00000555405 INTS1Q8N201 2190 aaKnown RBP9.09□□□□□ -0.95
NEK9-205ENST00000555405 DAPL1A0PJW8 107 aa9.09□□□□□ -0.95
NEK9-205ENST00000555405 C12orf71A8MTZ7 269 aa9.09□□□□□ -0.95
NEK9-205ENST00000555405 MYL12BO14950 172 aa9.09□□□□□ -0.95
NEK9-205ENST00000555405 DOK2O60496 412 aa9.09□□□□□ -0.95
NEK9-205ENST00000555405 TRMUO75648 421 aaKnown RBP9.09□□□□□ -0.95
NEK9-205ENST00000555405 GLSO94925 669 aaPredicted RBP9.09□□□□□ -0.95
NEK9-205ENST00000555405 INMTO95050 263 aa9.09□□□□□ -0.95
NEK9-205ENST00000555405 RPP14O95059 124 aaKnown RBP9.09□□□□□ -0.95
NEK9-205ENST00000555405 CTLA4P16410 223 aa9.09□□□□□ -0.95
NEK9-205ENST00000555405 RPS4XP62701 263 aaKnown RBP9.09□□□□□ -0.95
NEK9-205ENST00000555405 LRRC18Q8N456 261 aa9.09□□□□□ -0.95
NEK9-205ENST00000555405 LGALS12Q96DT0 336 aa9.09□□□□□ -0.95
NEK9-205ENST00000555405 CDADC1Q9BWV3 514 aa9.09□□□□□ -0.95
NEK9-205ENST00000555405 TRAPPC4Q9Y296 219 aa9.09□□□□□ -0.95
NEK9-205ENST00000555405 NOSIPQ9Y314 301 aaKnown RBP9.09□□□□□ -0.95
NEK9-205ENST00000555405 J3QLW9 94 aa9.09□□□□□ -0.95
NEK9-205ENST00000555405 TGM6O95932 706 aa9.09□□□□□ -0.95
NEK9-205ENST00000555405 QDPRP09417 244 aa9.09□□□□□ -0.95
NEK9-205ENST00000555405 ZNF17P17021 662 aa9.09□□□□□ -0.95
NEK9-205ENST00000555405 ZNF19P17023 458 aa9.09□□□□□ -0.95
NEK9-205ENST00000555405 GABRB1P18505 474 aa9.09□□□□□ -0.95
NEK9-205ENST00000555405 CAPZA2P47755 286 aa9.09□□□□□ -0.95
NEK9-205ENST00000555405 DAP3P51398 398 aaKnown RBP9.09□□□□□ -0.95
NEK9-205ENST00000555405 CLDN18P56856 261 aa9.09□□□□□ -0.95
NEK9-205ENST00000555405 GPR139Q6DWJ6 353 aa9.09□□□□□ -0.95
NEK9-205ENST00000555405 IGFL2Q6UWQ7 119 aa9.09□□□□□ -0.95
NEK9-205ENST00000555405 DPY19L4Q7Z388 723 aa9.09□□□□□ -0.95
NEK9-205ENST00000555405 PXKQ7Z7A4 578 aa9.09□□□□□ -0.95
NEK9-205ENST00000555405 ZNF100Q8IYN0 542 aa9.09□□□□□ -0.95
NEK9-205ENST00000555405 OR9K2Q8NGE7 335 aa9.09□□□□□ -0.95
NEK9-205ENST00000555405 GATAD2BQ8WXI9 593 aa9.09□□□□□ -0.95
NEK9-205ENST00000555405 RORBQ92753 470 aa9.09□□□□□ -0.95
NEK9-205ENST00000555405 ADAD1Q96M93 576 aaKnown RBP9.09□□□□□ -0.95
NEK9-205ENST00000555405 PSORS1C1Q9UIG5 152 aa9.09□□□□□ -0.95
NEK9-205ENST00000555405 BAIAP2Q9UQB8 552 aa9.09□□□□□ -0.95
NEK9-205ENST00000555405 ERGIC3Q9Y282 383 aa9.09□□□□□ -0.95
NEK9-205ENST00000555405 NOX1Q9Y5S8 564 aa9.09□□□□□ -0.95
NEK9-205ENST00000555405 HSPE1-MOB4S4R3N1 261 aa9.09□□□□□ -0.95
NEK9-205ENST00000555405 CADP27708 2225 aa9.08□□□□□ -0.96
NEK9-205ENST00000555405 IGKV1D-43A0A0B4J1Z2 117 aa9.08□□□□□ -0.96
NEK9-205ENST00000555405 PRSS37A4D1T9 235 aa9.08□□□□□ -0.96
NEK9-205ENST00000555405 DPPA5A6NC42 116 aa9.08□□□□□ -0.96
NEK9-205ENST00000555405 AQP7P3A6NL99 342 aa9.08□□□□□ -0.96
NEK9-205ENST00000555405 MRPL33O75394 65 aaKnown RBP9.08□□□□□ -0.96
NEK9-205ENST00000555405 CCDC159P0C7I6 412 aa9.08□□□□□ -0.96
NEK9-205ENST00000555405 PTGS2P35354 604 aa9.08□□□□□ -0.96
NEK9-205ENST00000555405 CSNK1A1P48729 337 aa9.08□□□□□ -0.96
NEK9-205ENST00000555405 MAP2K6P52564 334 aa9.08□□□□□ -0.96
NEK9-205ENST00000555405 SNRPGP62308 76 aaKnown RBP9.08□□□□□ -0.96
NEK9-205ENST00000555405 AADACL4Q5VUY2 407 aa9.08□□□□□ -0.96
NEK9-205ENST00000555405 SPARTQ8N0X7 666 aa9.08□□□□□ -0.96
NEK9-205ENST00000555405 EXD3Q8N9H8 876 aa9.08□□□□□ -0.96
NEK9-205ENST00000555405 LRRC75AQ8NAA5 344 aa9.08□□□□□ -0.96
NEK9-205ENST00000555405 OR10H5Q8NGA6 315 aa9.08□□□□□ -0.96
NEK9-205ENST00000555405 TMEM203Q969S6 136 aa9.08□□□□□ -0.96
NEK9-205ENST00000555405 WDR76Q9H967 626 aa9.08□□□□□ -0.96
NEK9-205ENST00000555405 EMC7Q9NPA0 242 aa9.08□□□□□ -0.96
NEK9-205ENST00000555405 EXOSC4Q9NPD3 245 aaKnown RBP9.08□□□□□ -0.96
NEK9-205ENST00000555405 B3GAT1Q9P2W7 334 aa9.08□□□□□ -0.96
NEK9-205ENST00000555405 KLHL21Q9UJP4 597 aa9.08□□□□□ -0.96
NEK9-205ENST00000555405 KALRNO60229 2985 aa9.08□□□□□ -0.96
NEK9-205ENST00000555405 USP24Q9UPU5 2620 aa9.08□□□□□ -0.96
NEK9-205ENST00000555405 AKAP6Q13023 2319 aa9.08□□□□□ -0.96
NEK9-205ENST00000555405 EFCAB10A6NFE3 127 aa9.08□□□□□ -0.96
NEK9-205ENST00000555405 SLC22A20A6NK97 555 aa9.08□□□□□ -0.96
NEK9-205ENST00000555405 ARPC3O15145 178 aa9.08□□□□□ -0.96
NEK9-205ENST00000555405 PMS2P2O95744 297 aa9.08□□□□□ -0.96
NEK9-205ENST00000555405 IGHG1P01857 330 aa9.08□□□□□ -0.96
NEK9-205ENST00000555405 EMX1Q04741 257 aaPredicted RBP9.08□□□□□ -0.96
NEK9-205ENST00000555405 MEDAGQ5VYS4 303 aa9.08□□□□□ -0.96
NEK9-205ENST00000555405 NXNL2Q5VZ03 156 aa9.08□□□□□ -0.96
NEK9-205ENST00000555405 GFRALQ6UXV0 394 aa9.08□□□□□ -0.96
NEK9-205ENST00000555405 RPTNQ6XPR3 784 aa9.08□□□□□ -0.96
NEK9-205ENST00000555405 NCCRP1Q6ZVX7 275 aaPredicted RBP9.08□□□□□ -0.96
NEK9-205ENST00000555405 OR52I1Q8NGK6 324 aa9.08□□□□□ -0.96
NEK9-205ENST00000555405 OR2T4Q8NH00 348 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms