RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 SNX18Q96RF0 628 aa11.19□□□□□ -0.62
SYNE2-219ENST00000555323 DDOQ99489 341 aa11.19□□□□□ -0.62
SYNE2-219ENST00000555323 SLC29A1Q99808 456 aa11.19□□□□□ -0.62
SYNE2-219ENST00000555323 ALG12Q9BV10 488 aa11.19□□□□□ -0.62
SYNE2-219ENST00000555323 IFT27Q9BW83 186 aa11.19□□□□□ -0.62
SYNE2-219ENST00000555323 TSSK6Q9BXA6 273 aa11.19□□□□□ -0.62
SYNE2-219ENST00000555323 HDHD5Q9BXW7 423 aa11.19□□□□□ -0.62
SYNE2-219ENST00000555323 RNPEPL1Q9HAU8 725 aa11.19□□□□□ -0.62
SYNE2-219ENST00000555323 C8orf4Q9NR00 106 aa11.19□□□□□ -0.62
SYNE2-219ENST00000555323 KRT84Q9NSB2 600 aa11.19□□□□□ -0.62
SYNE2-219ENST00000555323 ASB6Q9NWX5 421 aa11.19□□□□□ -0.62
SYNE2-219ENST00000555323 GLTPQ9NZD2 209 aa11.19□□□□□ -0.62
SYNE2-219ENST00000555323 UPB1Q9UBR1 384 aa11.19□□□□□ -0.62
SYNE2-219ENST00000555323 ENOPH1Q9UHY7 261 aa11.19□□□□□ -0.62
SYNE2-219ENST00000555323 KLF2Q9Y5W3 355 aaPredicted RBP11.19□□□□□ -0.62
SYNE2-219ENST00000555323 UBR5O95071 2799 aaPredicted RBP11.18□□□□□ -0.62
SYNE2-219ENST00000555323 EEF1E1-BLOC1S5C9J1V9 151 aa11.18□□□□□ -0.62
SYNE2-219ENST00000555323 E9PQ18 207 aa11.18□□□□□ -0.62
SYNE2-219ENST00000555323 SOCS2O14508 198 aa11.18□□□□□ -0.62
SYNE2-219ENST00000555323 EI24O14681 340 aa11.18□□□□□ -0.62
SYNE2-219ENST00000555323 EEF1E1O43324 174 aaKnown RBP11.18□□□□□ -0.62
SYNE2-219ENST00000555323 SOX14O95416 240 aa11.18□□□□□ -0.62
SYNE2-219ENST00000555323 PPP1R3DO95685 299 aa11.18□□□□□ -0.62
SYNE2-219ENST00000555323 PSMB1P20618 241 aaKnown RBP11.18□□□□□ -0.62
SYNE2-219ENST00000555323 COX5AP20674 150 aa11.18□□□□□ -0.62
SYNE2-219ENST00000555323 IGHV1-2P23083 117 aa11.18□□□□□ -0.62
SYNE2-219ENST00000555323 IGFBP5P24593 272 aa11.18□□□□□ -0.62
SYNE2-219ENST00000555323 MPGP29372 298 aa11.18□□□□□ -0.62
SYNE2-219ENST00000555323 ACVR1BP36896 505 aa11.18□□□□□ -0.62
SYNE2-219ENST00000555323 CD79BP40259 229 aa11.18□□□□□ -0.62
SYNE2-219ENST00000555323 CRISP1P54107 249 aa11.18□□□□□ -0.62
SYNE2-219ENST00000555323 SLC34A1Q06495 639 aa11.18□□□□□ -0.62
SYNE2-219ENST00000555323 MESTQ5EB52 335 aa11.18□□□□□ -0.62
SYNE2-219ENST00000555323 PHYHD1Q5SRE7 291 aa11.18□□□□□ -0.62
SYNE2-219ENST00000555323 THEM4Q5T1C6 240 aa11.18□□□□□ -0.62
SYNE2-219ENST00000555323 SFRP5Q5T4F7 317 aa11.18□□□□□ -0.62
SYNE2-219ENST00000555323 LRFN4Q6PJG9 635 aa11.18□□□□□ -0.62
SYNE2-219ENST00000555323 LINGO2Q7L985 606 aa11.18□□□□□ -0.62
SYNE2-219ENST00000555323 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.18□□□□□ -0.62
SYNE2-219ENST00000555323 ABHD12BQ7Z5M8 362 aaPredicted RBP11.18□□□□□ -0.62
SYNE2-219ENST00000555323 ADCK1Q86TW2 530 aa11.18□□□□□ -0.62
SYNE2-219ENST00000555323 OR2T33Q8NG76 320 aa11.18□□□□□ -0.62
SYNE2-219ENST00000555323 OR4Q3Q8NH05 313 aa11.18□□□□□ -0.62
SYNE2-219ENST00000555323 TEX47Q8TBZ9 253 aa11.18□□□□□ -0.62
SYNE2-219ENST00000555323 MAGEE2Q8TD90 523 aaPredicted RBP11.18□□□□□ -0.62
SYNE2-219ENST00000555323 EME1Q96AY2 570 aa11.18□□□□□ -0.62
SYNE2-219ENST00000555323 LRRC46Q96FV0 321 aa11.18□□□□□ -0.62
SYNE2-219ENST00000555323 ZNF570Q96NI8 536 aa11.18□□□□□ -0.62
SYNE2-219ENST00000555323 RBM24Q9BX46 236 aaKnown RBP11.18□□□□□ -0.62
SYNE2-219ENST00000555323 OR10A4Q9H209 315 aa11.18□□□□□ -0.62
SYNE2-219ENST00000555323 KIF17Q9P2E2 1029 aa11.18□□□□□ -0.62
SYNE2-219ENST00000555323 NKX1-2Q9UD57 310 aaPredicted RBP11.18□□□□□ -0.62
SYNE2-219ENST00000555323 GPR52Q9Y2T5 361 aa11.18□□□□□ -0.62
SYNE2-219ENST00000555323 RRP15Q9Y3B9 282 aaKnown RBP11.18□□□□□ -0.62
SYNE2-219ENST00000555323 FREM1Q5H8C1 2179 aa11.17□□□□□ -0.62
SYNE2-219ENST00000555323 TEX13CA0A0J9YWL9 993 aa11.17□□□□□ -0.62
SYNE2-219ENST00000555323 PRSS37A4D1T9 235 aa11.17□□□□□ -0.62
SYNE2-219ENST00000555323 NKX2-6A6NCS4 301 aa11.17□□□□□ -0.62
SYNE2-219ENST00000555323 FAM90A27PA6NNH2 459 aa11.17□□□□□ -0.62
SYNE2-219ENST00000555323 H3BN98 237 aa11.17□□□□□ -0.62
SYNE2-219ENST00000555323 ARHGEF9O43307 516 aa11.17□□□□□ -0.62
SYNE2-219ENST00000555323 MITFO75030 526 aaPredicted RBP11.17□□□□□ -0.62
SYNE2-219ENST00000555323 IGHV3-9P01782 118 aa11.17□□□□□ -0.62
SYNE2-219ENST00000555323 NR2C1P13056 603 aa11.17□□□□□ -0.62
SYNE2-219ENST00000555323 CDKN2AP42771 156 aaKnown RBP11.17□□□□□ -0.62
SYNE2-219ENST00000555323 CSNK1A1P48729 337 aa11.17□□□□□ -0.62
SYNE2-219ENST00000555323 MYBPC1Q00872 1141 aa11.17□□□□□ -0.62
SYNE2-219ENST00000555323 FAM27E3Q08E93 113 aa11.17□□□□□ -0.62
SYNE2-219ENST00000555323 FAPQ12884 760 aa11.17□□□□□ -0.62
SYNE2-219ENST00000555323 GINS1Q14691 196 aa11.17□□□□□ -0.62
SYNE2-219ENST00000555323 PTGES3Q15185 160 aaKnown RBP11.17□□□□□ -0.62
SYNE2-219ENST00000555323 CLEC12AQ5QGZ9 265 aa11.17□□□□□ -0.62
SYNE2-219ENST00000555323 OGFRL1Q5TC84 451 aaPredicted RBP11.17□□□□□ -0.62
SYNE2-219ENST00000555323 ACSM5Q6NUN0 579 aa11.17□□□□□ -0.62
SYNE2-219ENST00000555323 SLC27A4Q6P1M0 643 aa11.17□□□□□ -0.62
SYNE2-219ENST00000555323 STAC2Q6ZMT1 411 aa11.17□□□□□ -0.62
SYNE2-219ENST00000555323 ZNF627Q7L945 461 aa11.17□□□□□ -0.62
SYNE2-219ENST00000555323 UBE2J2Q8N2K1 259 aa11.17□□□□□ -0.62
SYNE2-219ENST00000555323 GPR137CQ8N3F9 429 aa11.17□□□□□ -0.62
SYNE2-219ENST00000555323 PACRGLQ8N7B6 248 aa11.17□□□□□ -0.62
SYNE2-219ENST00000555323 ZNF433Q8N7K0 673 aaPredicted RBP11.17□□□□□ -0.62
SYNE2-219ENST00000555323 ACBD4Q8NC06 268 aa11.17□□□□□ -0.62
SYNE2-219ENST00000555323 NOXO1Q8NFA2 376 aa11.17□□□□□ -0.62
SYNE2-219ENST00000555323 OR6N1Q8NGY5 312 aa11.17□□□□□ -0.62
SYNE2-219ENST00000555323 MCHR2Q969V1 340 aa11.17□□□□□ -0.62
SYNE2-219ENST00000555323 MUS81Q96NY9 551 aa11.17□□□□□ -0.62
SYNE2-219ENST00000555323 RBP7Q96R05 134 aa11.17□□□□□ -0.62
SYNE2-219ENST00000555323 USB1Q9BQ65 265 aaKnown RBP11.17□□□□□ -0.62
SYNE2-219ENST00000555323 GABARAPL3Q9BY60 117 aa11.17□□□□□ -0.62
SYNE2-219ENST00000555323 SLC25A19Q9HC21 320 aa11.17□□□□□ -0.62
SYNE2-219ENST00000555323 GPR35Q9HC97 309 aa11.17□□□□□ -0.62
SYNE2-219ENST00000555323 TBC1D23Q9NUY8 699 aa11.17□□□□□ -0.62
SYNE2-219ENST00000555323 GALNT8Q9NY28 637 aa11.17□□□□□ -0.62
SYNE2-219ENST00000555323 TAS2R16Q9NYV7 291 aa11.17□□□□□ -0.62
SYNE2-219ENST00000555323 VSX1Q9NZR4 365 aaPredicted RBP11.17□□□□□ -0.62
SYNE2-219ENST00000555323 SLC22A23A1A5C7 686 aa11.16□□□□□ -0.62
SYNE2-219ENST00000555323 ZAR1LA6NP61 321 aa11.16□□□□□ -0.62
SYNE2-219ENST00000555323 ZNF587BE7ETH6 402 aa11.16□□□□□ -0.62
SYNE2-219ENST00000555323 C16orf97H3BN30 126 aa11.16□□□□□ -0.62
SYNE2-219ENST00000555323 M0R3G1 203 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms