RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 BHLHE40O14503 412 aa12.61□□□□□ -0.39
CHD8-208ENST00000555301 EI24O14681 340 aa12.61□□□□□ -0.39
CHD8-208ENST00000555301 AHCYL1O43865 530 aa12.61□□□□□ -0.39
CHD8-208ENST00000555301 MGRN1O60291 552 aa12.61□□□□□ -0.39
CHD8-208ENST00000555301 UPK3AO75631 287 aa12.61□□□□□ -0.39
CHD8-208ENST00000555301 TRMUO75648 421 aaKnown RBP12.61□□□□□ -0.39
CHD8-208ENST00000555301 PPP1R3DO95685 299 aa12.61□□□□□ -0.39
CHD8-208ENST00000555301 ALPLP05186 524 aa12.61□□□□□ -0.39
CHD8-208ENST00000555301 PGA4P0DJD7 388 aa12.61□□□□□ -0.39
CHD8-208ENST00000555301 PGA3P0DJD8 388 aa12.61□□□□□ -0.39
CHD8-208ENST00000555301 CDH2P19022 906 aaPredicted RBP12.61□□□□□ -0.39
CHD8-208ENST00000555301 POU1F1P28069 291 aa12.61□□□□□ -0.39
CHD8-208ENST00000555301 CD79BP40259 229 aa12.61□□□□□ -0.39
CHD8-208ENST00000555301 RAD23AP54725 363 aa12.61□□□□□ -0.39
CHD8-208ENST00000555301 SLC34A1Q06495 639 aa12.61□□□□□ -0.39
CHD8-208ENST00000555301 FAPQ12884 760 aa12.61□□□□□ -0.39
CHD8-208ENST00000555301 RIPK1Q13546 671 aa12.61□□□□□ -0.39
CHD8-208ENST00000555301 KRR1Q13601 381 aaKnown RBP12.61□□□□□ -0.39
CHD8-208ENST00000555301 SLC27A4Q6P1M0 643 aa12.61□□□□□ -0.39
CHD8-208ENST00000555301 ADCK1Q86TW2 530 aa12.61□□□□□ -0.39
CHD8-208ENST00000555301 GABRG1Q8N1C3 465 aa12.61□□□□□ -0.39
CHD8-208ENST00000555301 LNX2Q8N448 690 aa12.61□□□□□ -0.39
CHD8-208ENST00000555301 NOXO1Q8NFA2 376 aa12.61□□□□□ -0.39
CHD8-208ENST00000555301 OR8D4Q8NGM9 314 aa12.61□□□□□ -0.39
CHD8-208ENST00000555301 TMEM54Q969K7 222 aa12.61□□□□□ -0.39
CHD8-208ENST00000555301 KCNK17Q96T54 332 aa12.61□□□□□ -0.39
CHD8-208ENST00000555301 TEX12Q9BXU0 123 aa12.61□□□□□ -0.39
CHD8-208ENST00000555301 HDHD5Q9BXW7 423 aa12.61□□□□□ -0.39
CHD8-208ENST00000555301 MRPL13Q9BYD1 178 aaKnown RBP12.61□□□□□ -0.39
CHD8-208ENST00000555301 RNPEPL1Q9HAU8 725 aa12.61□□□□□ -0.39
CHD8-208ENST00000555301 GLTPQ9NZD2 209 aa12.61□□□□□ -0.39
CHD8-208ENST00000555301 TMEFF2Q9UIK5 374 aaPredicted RBP12.61□□□□□ -0.39
CHD8-208ENST00000555301 KLF2Q9Y5W3 355 aaPredicted RBP12.61□□□□□ -0.39
CHD8-208ENST00000555301 UBR5O95071 2799 aaPredicted RBP12.61□□□□□ -0.39
CHD8-208ENST00000555301 PHF3Q92576 2039 aaKnown RBP12.61□□□□□ -0.39
CHD8-208ENST00000555301 RPL36A-HNRNPH2H7BZ11 118 aa12.6□□□□□ -0.39
CHD8-208ENST00000555301 M0R3G1 203 aa12.6□□□□□ -0.39
CHD8-208ENST00000555301 ARHGEF9O43307 516 aa12.6□□□□□ -0.39
CHD8-208ENST00000555301 IGFBP1P08833 259 aaPredicted RBP12.6□□□□□ -0.39
CHD8-208ENST00000555301 RNF224P0DH78 156 aa12.6□□□□□ -0.39
CHD8-208ENST00000555301 MPGP29372 298 aa12.6□□□□□ -0.39
CHD8-208ENST00000555301 GIPRP48546 466 aa12.6□□□□□ -0.39
CHD8-208ENST00000555301 CRISP1P54107 249 aa12.6□□□□□ -0.39
CHD8-208ENST00000555301 TGFBR3Q03167 851 aa12.6□□□□□ -0.39
CHD8-208ENST00000555301 RUNX1T1Q06455 604 aa12.6□□□□□ -0.39
CHD8-208ENST00000555301 TFF3Q07654 80 aa12.6□□□□□ -0.39
CHD8-208ENST00000555301 ITGADQ13349 1161 aa12.6□□□□□ -0.39
CHD8-208ENST00000555301 STK11Q15831 433 aa12.6□□□□□ -0.39
CHD8-208ENST00000555301 HIST3H3Q16695 136 aa12.6□□□□□ -0.39
CHD8-208ENST00000555301 MESTQ5EB52 335 aa12.6□□□□□ -0.39
CHD8-208ENST00000555301 JAZF1Q86VZ6 243 aa12.6□□□□□ -0.39
CHD8-208ENST00000555301 HDAC2Q92769 488 aaKnown RBP12.6□□□□□ -0.39
CHD8-208ENST00000555301 RASD2Q96D21 266 aa12.6□□□□□ -0.39
CHD8-208ENST00000555301 ALKBH3Q96Q83 286 aaPredicted RBP12.6□□□□□ -0.39
CHD8-208ENST00000555301 RBP7Q96R05 134 aa12.6□□□□□ -0.39
CHD8-208ENST00000555301 ULBP2Q9BZM5 246 aa12.6□□□□□ -0.39
CHD8-208ENST00000555301 GALNT8Q9NY28 637 aa12.6□□□□□ -0.39
CHD8-208ENST00000555301 TAS2R16Q9NYV7 291 aa12.6□□□□□ -0.39
CHD8-208ENST00000555301 PRSS37A4D1T9 235 aa12.59□□□□□ -0.39
CHD8-208ENST00000555301 SOCS2O14508 198 aa12.59□□□□□ -0.39
CHD8-208ENST00000555301 CASQ2O14958 399 aaPredicted RBP12.59□□□□□ -0.39
CHD8-208ENST00000555301 MITFO75030 526 aaPredicted RBP12.59□□□□□ -0.39
CHD8-208ENST00000555301 PSMB1P20618 241 aaKnown RBP12.59□□□□□ -0.39
CHD8-208ENST00000555301 COX5AP20674 150 aa12.59□□□□□ -0.39
CHD8-208ENST00000555301 PEX19P40855 299 aa12.59□□□□□ -0.39
CHD8-208ENST00000555301 SORDQ00796 357 aa12.59□□□□□ -0.39
CHD8-208ENST00000555301 MYBPC1Q00872 1141 aa12.59□□□□□ -0.39
CHD8-208ENST00000555301 ROR2Q01974 943 aaKnown RBP12.59□□□□□ -0.39
CHD8-208ENST00000555301 LGALS3BPQ08380 585 aa12.59□□□□□ -0.39
CHD8-208ENST00000555301 CD47Q08722 323 aa12.59□□□□□ -0.39
CHD8-208ENST00000555301 GINS1Q14691 196 aa12.59□□□□□ -0.39
CHD8-208ENST00000555301 PGGHGQ32M88 737 aa12.59□□□□□ -0.39
CHD8-208ENST00000555301 THEM4Q5T1C6 240 aa12.59□□□□□ -0.39
CHD8-208ENST00000555301 SFRP5Q5T4F7 317 aa12.59□□□□□ -0.39
CHD8-208ENST00000555301 CXorf67Q86X51 503 aaPredicted RBP12.59□□□□□ -0.39
CHD8-208ENST00000555301 WDFY1Q8IWB7 410 aa12.59□□□□□ -0.39
CHD8-208ENST00000555301 PACRGLQ8N7B6 248 aa12.59□□□□□ -0.39
CHD8-208ENST00000555301 SYT14Q8NB59 555 aa12.59□□□□□ -0.39
CHD8-208ENST00000555301 OR4Q3Q8NH05 313 aa12.59□□□□□ -0.39
CHD8-208ENST00000555301 KISS1RQ969F8 398 aaPredicted RBP12.59□□□□□ -0.39
CHD8-208ENST00000555301 SNX18Q96RF0 628 aa12.59□□□□□ -0.39
CHD8-208ENST00000555301 SLC29A1Q99808 456 aa12.59□□□□□ -0.39
CHD8-208ENST00000555301 USB1Q9BQ65 265 aaKnown RBP12.59□□□□□ -0.39
CHD8-208ENST00000555301 GABARAPL3Q9BY60 117 aa12.59□□□□□ -0.39
CHD8-208ENST00000555301 SLC25A19Q9HC21 320 aa12.59□□□□□ -0.39
CHD8-208ENST00000555301 CRLF2Q9HC73 371 aa12.59□□□□□ -0.39
CHD8-208ENST00000555301 GPR35Q9HC97 309 aa12.59□□□□□ -0.39
CHD8-208ENST00000555301 GPR52Q9Y2T5 361 aa12.59□□□□□ -0.39
CHD8-208ENST00000555301 ARHGAP21Q5T5U3 1957 aa12.58□□□□□ -0.4
CHD8-208ENST00000555301 SLC22A23A1A5C7 686 aa12.58□□□□□ -0.4
CHD8-208ENST00000555301 C16orf97H3BN30 126 aa12.58□□□□□ -0.4
CHD8-208ENST00000555301 RENP00797 406 aa12.58□□□□□ -0.4
CHD8-208ENST00000555301 IFNGP01579 166 aa12.58□□□□□ -0.4
CHD8-208ENST00000555301 HMGN1P05114 100 aa12.58□□□□□ -0.4
CHD8-208ENST00000555301 QDPRP09417 244 aa12.58□□□□□ -0.4
CHD8-208ENST00000555301 HIST1H1CP16403 213 aaKnown RBP12.58□□□□□ -0.4
CHD8-208ENST00000555301 IGHV1-2P23083 117 aa12.58□□□□□ -0.4
CHD8-208ENST00000555301 GRK5P34947 590 aa12.58□□□□□ -0.4
CHD8-208ENST00000555301 ZNF133P52736 654 aaPredicted RBP12.58□□□□□ -0.4
CHD8-208ENST00000555301 SH3BGRP55822 239 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms