RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 SDHBP21912 280 aa9.75□□□□□ -0.85
MTHFD1-210ENST00000555252 CTHP32929 405 aa9.75□□□□□ -0.85
MTHFD1-210ENST00000555252 MAP3K8P41279 467 aa9.75□□□□□ -0.85
MTHFD1-210ENST00000555252 ARF3P61204 181 aaPredicted RBP9.75□□□□□ -0.85
MTHFD1-210ENST00000555252 SORDQ00796 357 aa9.75□□□□□ -0.85
MTHFD1-210ENST00000555252 GPR18Q14330 331 aa9.75□□□□□ -0.85
MTHFD1-210ENST00000555252 PON3Q15166 354 aa9.75□□□□□ -0.85
MTHFD1-210ENST00000555252 Q499Y3 187 aa9.75□□□□□ -0.85
MTHFD1-210ENST00000555252 TRMT12Q53H54 448 aaKnown RBP9.75□□□□□ -0.85
MTHFD1-210ENST00000555252 MRPL2Q5T653 305 aaKnown RBP9.75□□□□□ -0.85
MTHFD1-210ENST00000555252 GLT8D1Q68CQ7 371 aa9.75□□□□□ -0.85
MTHFD1-210ENST00000555252 STAC2Q6ZMT1 411 aa9.75□□□□□ -0.85
MTHFD1-210ENST00000555252 SKA3Q8IX90 412 aa9.75□□□□□ -0.85
MTHFD1-210ENST00000555252 DMBX1Q8NFW5 382 aa9.75□□□□□ -0.85
MTHFD1-210ENST00000555252 OR10G6Q8NH81 332 aa9.75□□□□□ -0.85
MTHFD1-210ENST00000555252 CCL4L1Q8NHW4 92 aa9.75□□□□□ -0.85
MTHFD1-210ENST00000555252 GCDHQ92947 438 aaPredicted RBP9.75□□□□□ -0.85
MTHFD1-210ENST00000555252 MRPL38Q96DV4 380 aaKnown RBP9.75□□□□□ -0.85
MTHFD1-210ENST00000555252 WDR89Q96FK6 387 aaPredicted RBP9.75□□□□□ -0.85
MTHFD1-210ENST00000555252 SLC25A21Q9BQT8 299 aaPredicted RBP9.75□□□□□ -0.85
MTHFD1-210ENST00000555252 ZNF426Q9BUY5 554 aa9.75□□□□□ -0.85
MTHFD1-210ENST00000555252 TCF7L1Q9HCS4 588 aa9.75□□□□□ -0.85
MTHFD1-210ENST00000555252 ADAP2Q9NPF8 381 aa9.75□□□□□ -0.85
MTHFD1-210ENST00000555252 CTSFQ9UBX1 484 aa9.75□□□□□ -0.85
MTHFD1-210ENST00000555252 CHRNA9Q9UGM1 479 aa9.75□□□□□ -0.85
MTHFD1-210ENST00000555252 ZNF107Q9UII5 783 aaPredicted RBP9.75□□□□□ -0.85
MTHFD1-210ENST00000555252 SNRNP200O75643 2136 aaKnown RBP9.74□□□□□ -0.85
MTHFD1-210ENST00000555252 TRBV23OR9-2A0A075B6M9 112 aa9.74□□□□□ -0.85
MTHFD1-210ENST00000555252 TRAV14DV4A0A0A6YYC5 116 aa9.74□□□□□ -0.85
MTHFD1-210ENST00000555252 HSPB2A8KAH6 182 aa9.74□□□□□ -0.85
MTHFD1-210ENST00000555252 CYR61O00622 381 aa9.74□□□□□ -0.85
MTHFD1-210ENST00000555252 IMPA2O14732 288 aa9.74□□□□□ -0.85
MTHFD1-210ENST00000555252 BRINP1O60477 761 aa9.74□□□□□ -0.85
MTHFD1-210ENST00000555252 RLN1P04808 185 aa9.74□□□□□ -0.85
MTHFD1-210ENST00000555252 PVALBP20472 110 aaPredicted RBP9.74□□□□□ -0.85
MTHFD1-210ENST00000555252 NR0B1P51843 470 aaKnown RBP9.74□□□□□ -0.85
MTHFD1-210ENST00000555252 AKR1D1P51857 326 aa9.74□□□□□ -0.85
MTHFD1-210ENST00000555252 PSMD4P55036 377 aaKnown RBP9.74□□□□□ -0.85
MTHFD1-210ENST00000555252 ACTBP60709 375 aa9.74□□□□□ -0.85
MTHFD1-210ENST00000555252 ERVK-25P63136 954 aa9.74□□□□□ -0.85
MTHFD1-210ENST00000555252 ACTG1P63261 375 aa9.74□□□□□ -0.85
MTHFD1-210ENST00000555252 HYAL1Q12794 435 aa9.74□□□□□ -0.85
MTHFD1-210ENST00000555252 SNTB1Q13884 538 aaKnown RBP9.74□□□□□ -0.85
MTHFD1-210ENST00000555252 HSPB2Q16082 182 aa9.74□□□□□ -0.85
MTHFD1-210ENST00000555252 C2orf68Q2NKX9 166 aa9.74□□□□□ -0.85
MTHFD1-210ENST00000555252 ALG11Q2TAA5 492 aa9.74□□□□□ -0.85
MTHFD1-210ENST00000555252 PRICKLE4Q2TBC4 344 aa9.74□□□□□ -0.85
MTHFD1-210ENST00000555252 C9orf50Q5SZB4 431 aa9.74□□□□□ -0.85
MTHFD1-210ENST00000555252 DCAF12L2Q5VW00 463 aa9.74□□□□□ -0.85
MTHFD1-210ENST00000555252 JMJD6Q6NYC1 403 aaPredicted RBP9.74□□□□□ -0.85
MTHFD1-210ENST00000555252 ANKRD16Q6P6B7 361 aa9.74□□□□□ -0.85
MTHFD1-210ENST00000555252 ZNF227Q86WZ6 799 aa9.74□□□□□ -0.85
MTHFD1-210ENST00000555252 ZNF433Q8N7K0 673 aaPredicted RBP9.74□□□□□ -0.85
MTHFD1-210ENST00000555252 LINC00469Q8N7U9 141 aa9.74□□□□□ -0.85
MTHFD1-210ENST00000555252 OR4D10Q8NGI6 311 aa9.74□□□□□ -0.85
MTHFD1-210ENST00000555252 OR8K3Q8NH51 312 aa9.74□□□□□ -0.85
MTHFD1-210ENST00000555252 HOXB13Q92826 284 aaPredicted RBP9.74□□□□□ -0.85
MTHFD1-210ENST00000555252 PDCD1LG2Q9BQ51 273 aa9.74□□□□□ -0.85
MTHFD1-210ENST00000555252 POTEKPQ9BYX7 375 aa9.74□□□□□ -0.85
MTHFD1-210ENST00000555252 TMEM138Q9NPI0 162 aa9.74□□□□□ -0.85
MTHFD1-210ENST00000555252 CPNE7Q9UBL6 633 aa9.74□□□□□ -0.85
MTHFD1-210ENST00000555252 TNFSF18Q9UNG2 199 aa9.74□□□□□ -0.85
MTHFD1-210ENST00000555252 EML5Q05BV3 1969 aa9.74□□□□□ -0.85
MTHFD1-210ENST00000555252 KIR2DS5A0A0G2JLQ3 304 aa9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 A0A0G2JNG1 304 aa9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 TRBV5-5A0A0J9YX44 114 aa9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 A0A1B0GTI1 187 aa9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 TMEM272A0A1B0GTI8 110 aa9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 TMEM200CA6NKL6 621 aa9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 KIR2DS3K7RE56 304 aa9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 LINC01565O15544 149 aa9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 FGF17O60258 216 aa9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 NKX2-2O95096 273 aa9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 FUT1P19526 365 aa9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 RPL35P42766 123 aaKnown RBP9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 GPR143P51810 404 aa9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 RAB38P57729 211 aa9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 PPIAP62937 165 aaKnown RBP9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 LTBQ06643 244 aa9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 KIR2DS5Q14953 304 aa9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 ZNF528Q3MIS6 628 aa9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 VWA2Q5GFL6 755 aa9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 FAAP20Q6NZ36 180 aa9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 C3orf33Q6P1S2 294 aa9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 SERPINA12Q8IW75 414 aa9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 CA13Q8N1Q1 262 aa9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 C12orf45Q8N5I9 185 aaPredicted RBP9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 RFLNBQ8N5W9 214 aa9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 CYB561A3Q8NBI2 242 aa9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 FAM3CQ92520 227 aa9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 ZMYND19Q96E35 227 aaPredicted RBP9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 MRGPRX1Q96LB2 322 aa9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 PDCD10Q9BUL8 212 aa9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 FANCFQ9NPI8 374 aa9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 COMMD9Q9P000 198 aa9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 TNRC18O15417 2968 aaPredicted RBP9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 CEP290O15078 2479 aa9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 TRAV27A0A087WT01 109 aa9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 A0A0B4J2E0 115 aa9.73□□□□□ -0.85
MTHFD1-210ENST00000555252 A0A1B0GX12 115 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms