RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 MOSPD2Q8NHP6 518 aa9.68□□□□□ -0.86
SHMT2-218ENST00000555213 FAM81AQ8TBF8 368 aa9.68□□□□□ -0.86
SHMT2-218ENST00000555213 TRUB1Q8WWH5 349 aaKnown RBP9.68□□□□□ -0.86
SHMT2-218ENST00000555213 ZNF566Q969W8 418 aa9.68□□□□□ -0.86
SHMT2-218ENST00000555213 TMEM45BQ96B21 275 aa9.68□□□□□ -0.86
SHMT2-218ENST00000555213 STARD4Q96DR4 205 aa9.68□□□□□ -0.86
SHMT2-218ENST00000555213 OXGR1Q96P68 337 aa9.68□□□□□ -0.86
SHMT2-218ENST00000555213 APOL4Q9BPW4 351 aa9.68□□□□□ -0.86
SHMT2-218ENST00000555213 POLDIP3Q9BY77 421 aaKnown RBP9.68□□□□□ -0.86
SHMT2-218ENST00000555213 DUSP21Q9H596 190 aa9.68□□□□□ -0.86
SHMT2-218ENST00000555213 C12orf49Q9H741 205 aa9.68□□□□□ -0.86
SHMT2-218ENST00000555213 PLCXD1Q9NUJ7 323 aa9.68□□□□□ -0.86
SHMT2-218ENST00000555213 TAS2R5Q9NYW4 299 aa9.68□□□□□ -0.86
SHMT2-218ENST00000555213 TVP23BQ9NYZ1 205 aa9.68□□□□□ -0.86
SHMT2-218ENST00000555213 MYRFQ9Y2G1 1151 aa9.68□□□□□ -0.86
SHMT2-218ENST00000555213 NOX1Q9Y5S8 564 aa9.68□□□□□ -0.86
SHMT2-218ENST00000555213 MYO7BQ6PIF6 2116 aa9.68□□□□□ -0.86
SHMT2-218ENST00000555213 ARHGAP21Q5T5U3 1957 aa9.67□□□□□ -0.86
SHMT2-218ENST00000555213 LOC102725191A0A1B0GVB3 256 aa9.67□□□□□ -0.86
SHMT2-218ENST00000555213 NKX2-6A6NCS4 301 aa9.67□□□□□ -0.86
SHMT2-218ENST00000555213 OR6C65A6NJZ3 312 aa9.67□□□□□ -0.86
SHMT2-218ENST00000555213 PRSS44E7EML9 344 aa9.67□□□□□ -0.86
SHMT2-218ENST00000555213 PLPP3O14495 311 aa9.67□□□□□ -0.86
SHMT2-218ENST00000555213 SURF4O15260 269 aa9.67□□□□□ -0.86
SHMT2-218ENST00000555213 RNF13O43567 381 aa9.67□□□□□ -0.86
SHMT2-218ENST00000555213 XPNPEP2O43895 674 aa9.67□□□□□ -0.86
SHMT2-218ENST00000555213 RAMP1O60894 148 aa9.67□□□□□ -0.86
SHMT2-218ENST00000555213 SLC2A10O95528 541 aa9.67□□□□□ -0.86
SHMT2-218ENST00000555213 ADRA2AP08913 450 aa9.67□□□□□ -0.86
SHMT2-218ENST00000555213 RNF224P0DH78 156 aa9.67□□□□□ -0.86
SHMT2-218ENST00000555213 UQCRC1P31930 480 aa9.67□□□□□ -0.86
SHMT2-218ENST00000555213 PEX19P40855 299 aa9.67□□□□□ -0.86
SHMT2-218ENST00000555213 P2RY4P51582 365 aa9.67□□□□□ -0.86
SHMT2-218ENST00000555213 TEKQ02763 1124 aa9.67□□□□□ -0.86
SHMT2-218ENST00000555213 POU3F1Q03052 451 aaPredicted RBP9.67□□□□□ -0.86
SHMT2-218ENST00000555213 OCLNQ16625 522 aa9.67□□□□□ -0.86
SHMT2-218ENST00000555213 ANKDD1AQ495B1 522 aa9.67□□□□□ -0.86
SHMT2-218ENST00000555213 KCTD21Q4G0X4 260 aa9.67□□□□□ -0.86
SHMT2-218ENST00000555213 CLEC12AQ5QGZ9 265 aa9.67□□□□□ -0.86
SHMT2-218ENST00000555213 RBM48Q5RL73 367 aaKnown RBP9.67□□□□□ -0.86
SHMT2-218ENST00000555213 SLC27A4Q6P1M0 643 aa9.67□□□□□ -0.86
SHMT2-218ENST00000555213 SMARCD3Q6STE5 483 aa9.67□□□□□ -0.86
SHMT2-218ENST00000555213 BEND4Q6ZU67 534 aa9.67□□□□□ -0.86
SHMT2-218ENST00000555213 AAED1Q7RTV5 226 aa9.67□□□□□ -0.86
SHMT2-218ENST00000555213 HDDC2Q7Z4H3 204 aa9.67□□□□□ -0.86
SHMT2-218ENST00000555213 BTLAQ7Z6A9 289 aa9.67□□□□□ -0.86
SHMT2-218ENST00000555213 PXKQ7Z7A4 578 aa9.67□□□□□ -0.86
SHMT2-218ENST00000555213 LUZP2Q86TE4 346 aa9.67□□□□□ -0.86
SHMT2-218ENST00000555213 OAFQ86UD1 273 aa9.67□□□□□ -0.86
SHMT2-218ENST00000555213 TCEANCQ8N8B7 351 aa9.67□□□□□ -0.86
SHMT2-218ENST00000555213 GGHQ92820 318 aa9.67□□□□□ -0.86
SHMT2-218ENST00000555213 RNASE6Q93091 150 aaKnown RBP9.67□□□□□ -0.86
SHMT2-218ENST00000555213 PTP4A1Q93096 173 aa9.67□□□□□ -0.86
SHMT2-218ENST00000555213 SIGLEC11Q96RL6 698 aa9.67□□□□□ -0.86
SHMT2-218ENST00000555213 IL4I1Q96RQ9 567 aa9.67□□□□□ -0.86
SHMT2-218ENST00000555213 RHNO1Q9BSD3 238 aa9.67□□□□□ -0.86
SHMT2-218ENST00000555213 RBM24Q9BX46 236 aaKnown RBP9.67□□□□□ -0.86
SHMT2-218ENST00000555213 OPN3Q9H1Y3 402 aaPredicted RBP9.67□□□□□ -0.86
SHMT2-218ENST00000555213 FKBP14Q9NWM8 211 aa9.67□□□□□ -0.86
SHMT2-218ENST00000555213 SEC14L4Q9UDX3 406 aa9.67□□□□□ -0.86
SHMT2-218ENST00000555213 ING1Q9UK53 422 aaPredicted RBP9.67□□□□□ -0.86
SHMT2-218ENST00000555213 RCE1Q9Y256 329 aa9.67□□□□□ -0.86
SHMT2-218ENST00000555213 HIF3AQ9Y2N7 669 aa9.67□□□□□ -0.86
SHMT2-218ENST00000555213 FLVCR1Q9Y5Y0 555 aa9.67□□□□□ -0.86
SHMT2-218ENST00000555213 DOCK7Q96N67 2140 aa9.67□□□□□ -0.86
SHMT2-218ENST00000555213 NCOA6Q14686 2063 aaPredicted RBP9.67□□□□□ -0.86
SHMT2-218ENST00000555213 A0A1W2PRG6 482 aa9.66□□□□□ -0.86
SHMT2-218ENST00000555213 A1L4Q6 167 aa9.66□□□□□ -0.86
SHMT2-218ENST00000555213 A8MXE2 369 aa9.66□□□□□ -0.86
SHMT2-218ENST00000555213 MCIDASD6RGH6 385 aa9.66□□□□□ -0.86
SHMT2-218ENST00000555213 MS4A18H0YCH9 400 aa9.66□□□□□ -0.86
SHMT2-218ENST00000555213 BLOC1S5-TXNDC5H3BN57 136 aa9.66□□□□□ -0.86
SHMT2-218ENST00000555213 SLC1A7O00341 560 aa9.66□□□□□ -0.86
SHMT2-218ENST00000555213 TLX2O43763 284 aaPredicted RBP9.66□□□□□ -0.86
SHMT2-218ENST00000555213 ENTPD6O75354 484 aa9.66□□□□□ -0.86
SHMT2-218ENST00000555213 SERPINI2O75830 405 aa9.66□□□□□ -0.86
SHMT2-218ENST00000555213 KRT33AO76009 404 aa9.66□□□□□ -0.86
SHMT2-218ENST00000555213 TNFAIP8O95379 198 aa9.66□□□□□ -0.86
SHMT2-218ENST00000555213 CNOT4O95628 575 aaKnown RBP9.66□□□□□ -0.86
SHMT2-218ENST00000555213 TFAP2AP05549 437 aa9.66□□□□□ -0.86
SHMT2-218ENST00000555213 CCDC159P0C7I6 412 aa9.66□□□□□ -0.86
SHMT2-218ENST00000555213 AQP2P41181 271 aa9.66□□□□□ -0.86
SHMT2-218ENST00000555213 SLC15A1P46059 708 aa9.66□□□□□ -0.86
SHMT2-218ENST00000555213 OR3A2P47893 321 aa9.66□□□□□ -0.86
SHMT2-218ENST00000555213 PCYT1AP49585 367 aa9.66□□□□□ -0.86
SHMT2-218ENST00000555213 DAP3P51398 398 aaKnown RBP9.66□□□□□ -0.86
SHMT2-218ENST00000555213 PRPS1P60891 318 aa9.66□□□□□ -0.86
SHMT2-218ENST00000555213 PIGFQ07326 219 aa9.66□□□□□ -0.86
SHMT2-218ENST00000555213 PGGHGQ32M88 737 aa9.66□□□□□ -0.86
SHMT2-218ENST00000555213 MS4A18Q3C1V0 323 aa9.66□□□□□ -0.86
SHMT2-218ENST00000555213 FBXL19-AS1Q494R0 122 aa9.66□□□□□ -0.86
SHMT2-218ENST00000555213 AADACL4Q5VUY2 407 aa9.66□□□□□ -0.86
SHMT2-218ENST00000555213 TMEM154Q6P9G4 183 aa9.66□□□□□ -0.86
SHMT2-218ENST00000555213 TFAP2EQ6VUC0 442 aa9.66□□□□□ -0.86
SHMT2-218ENST00000555213 PTCHD4Q6ZW05 846 aa9.66□□□□□ -0.86
SHMT2-218ENST00000555213 CREB3L2Q70SY1 520 aa9.66□□□□□ -0.86
SHMT2-218ENST00000555213 NUFIP2Q7Z417 695 aaKnown RBP9.66□□□□□ -0.86
SHMT2-218ENST00000555213 ABHD12BQ7Z5M8 362 aaPredicted RBP9.66□□□□□ -0.86
SHMT2-218ENST00000555213 DEPDC4Q8N2C3 294 aa9.66□□□□□ -0.86
SHMT2-218ENST00000555213 UBE2J2Q8N2K1 259 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms