RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 LRIT2A6NDA9 550 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 OR5K3A6NET4 321 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 S100A4P26447 101 aaKnown RBP6.38□□□□□ -1.39
SYNE2-216ENST00000555002 ZNF280AP59817 542 aaPredicted RBP6.38□□□□□ -1.39
SYNE2-216ENST00000555002 KCNJ8Q15842 424 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 PLAG1Q6DJT9 500 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 OR5B3Q8NH48 314 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 SMAP2Q8WU79 429 aaPredicted RBP6.38□□□□□ -1.39
SYNE2-216ENST00000555002 PCNPQ8WW12 178 aaKnown RBP6.38□□□□□ -1.39
SYNE2-216ENST00000555002 SMIM12Q96EX1 92 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 STACQ99469 402 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 MED9Q9NWA0 146 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 A0A096LPE4 126 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 A0A1W2PPZ6 126 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 LRRC3CA6NJW4 275 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 CA5AP35218 305 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 INHBCP55103 352 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 RPS23P62266 143 aaKnown RBP6.38□□□□□ -1.39
SYNE2-216ENST00000555002 EIF4HQ15056 248 aaKnown RBP6.38□□□□□ -1.39
SYNE2-216ENST00000555002 HMGN3Q15651 99 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 FAM69AQ5T7M9 428 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 BLOC1S3Q6QNY0 202 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 SIGLECL1Q8N7X8 197 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 GDPD1Q8N9F7 314 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 ACOT4Q8N9L9 421 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 FER1L6-AS2Q96M78 137 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 TCEAL7Q9BRU2 100 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 NIPSNAP3BQ9BS92 247 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 GDE1Q9NZC3 331 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 STYXL1Q9Y6J8 313 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 MED12Q93074 2177 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 DNASE2O00115 360 aaPredicted RBP6.38□□□□□ -1.39
SYNE2-216ENST00000555002 PRRG2O14669 202 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 LY86O95711 162 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 EGFP01133 1207 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 SLC25A6P12236 298 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 DCTP40126 519 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 CLDN12P56749 244 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 OR1D5P58170 312 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 KIR2DS3Q14952 304 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 ACTBL2Q562R1 376 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 OR10K2Q6IF99 312 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 PRR27Q6MZM9 219 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 TRNP1Q6NT89 227 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 OR6V1Q8N148 313 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 BCL7BQ9BQE9 202 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 GAREM1Q9H706 876 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 AGPAT4Q9NRZ5 378 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 SDHDO14521 159 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 ACKR3P25106 362 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 HAGHQ16775 308 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 B3GNT7Q8NFL0 401 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 ST8SIA4Q92187 359 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 ITPKCQ96DU7 683 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 SIRPB1O00241 398 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 GATCO43716 136 aaKnown RBP6.38□□□□□ -1.39
SYNE2-216ENST00000555002 HLCSP50747 726 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 CLDN8P56748 225 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 SRPXP78539 464 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 KCNAB1Q14722 419 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 TECRLQ5HYJ1 363 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 ENTPD8Q5MY95 495 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 MOB1BQ7L9L4 216 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 HSD17B13Q7Z5P4 300 aaPredicted RBP6.38□□□□□ -1.39
SYNE2-216ENST00000555002 CPPED1Q9BRF8 314 aaPredicted RBP6.38□□□□□ -1.39
SYNE2-216ENST00000555002 Q9Y3F1 56 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 MEIOCA2RUB1 952 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 COX7A2P2O60397 106 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 SULT1C4O75897 302 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 ELK1P19419 428 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 NUDT1P36639 197 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 TNFRSF4P43489 277 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 ARSDP51689 593 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 RHOBP62745 196 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 ZDHHC24Q6UX98 284 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 NPY6RQ99463 290 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 CHST6Q9GZX3 395 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 TMEM72A0PK05 275 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 RGPD8O14715 1765 aaPredicted RBP6.38□□□□□ -1.39
SYNE2-216ENST00000555002 SLIT2O94813 1529 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 RAP2BP61225 183 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 FOXC1Q12948 553 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 Q56UQ5 140 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 CDCA2Q69YH5 1023 aaPredicted RBP6.38□□□□□ -1.39
SYNE2-216ENST00000555002 CLEC14AQ86T13 490 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 LCORQ96JN0 433 aaPredicted RBP6.38□□□□□ -1.39
SYNE2-216ENST00000555002 ZNF317Q96PQ6 595 aaPredicted RBP6.38□□□□□ -1.39
SYNE2-216ENST00000555002 ABHD6Q9BV23 337 aa6.38□□□□□ -1.39
SYNE2-216ENST00000555002 TMEM82A0PJX8 343 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 TMEM268Q5VZI3 342 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 MEPCEQ7L2J0 689 aaKnown RBP6.37□□□□□ -1.39
SYNE2-216ENST00000555002 LYSMD1Q96S90 227 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 TXNRD2Q9NNW7 524 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 GPR173Q9NS66 373 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 GAR1Q9NY12 217 aaKnown RBP6.37□□□□□ -1.39
SYNE2-216ENST00000555002 RCE1Q9Y256 329 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 CHD5Q8TDI0 1954 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 FAM183AA6NL82 134 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 H3BNC9 293 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 DNPH1O43598 174 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms