RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 K7ERQ8 282 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 SDHDO14521 159 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 YKT6O15498 198 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 FAM189A1O60320 539 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 DFNA5O60443 496 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 JAK2O60674 1132 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 TSC22D2O75157 780 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 TRIM3O75382 744 aaPredicted RBP1.13□□□□□ -2.23
PRPF39-208ENST00000554785 STX11O75558 287 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 DUSP14O95147 198 aaKnown RBP1.13□□□□□ -2.23
PRPF39-208ENST00000554785 DEXIO95424 95 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 PCCBP05166 539 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 GP1BAP07359 652 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 HEXBP07686 556 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 CLTAP09496 248 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 CALCBP10092 127 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 ANXA3P12429 323 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 DESP17661 470 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 XRCC1P18887 633 aaPredicted RBP1.13□□□□□ -2.23
PRPF39-208ENST00000554785 TNNI1P19237 187 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 HNRNPA2B1P22626 353 aaKnown RBP1.13□□□□□ -2.23
PRPF39-208ENST00000554785 GDF1P27539 372 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 HTR1EP28566 365 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 XCR1P46094 333 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 TNNC1P63316 161 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 CXCL6P80162 114 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 CD47Q08722 323 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 PEX6Q13608 980 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 SERTAD2Q14140 314 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 FZD2Q14332 565 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 GSG1Q2KHT4 349 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 KRTAP21-3Q3LHN1 58 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 TMEM41BQ5BJD5 291 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 XKR4Q5GH76 650 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 ZNF57Q68EA5 555 aaPredicted RBP1.13□□□□□ -2.23
PRPF39-208ENST00000554785 ASPHD2Q6ICH7 369 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 SPOPLQ6IQ16 392 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 CGB2Q6NT52 195 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 STAC2Q6ZMT1 411 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 CYS1Q717R9 158 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 IFNEQ86WN2 208 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 ZNF573Q86YE8 665 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 MCOLN2Q8IZK6 566 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 CENPLQ8N0S6 344 aaPredicted RBP1.13□□□□□ -2.23
PRPF39-208ENST00000554785 BPIFB2Q8N4F0 458 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 LINC00612Q8N6U2 182 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 ZSCAN4Q8NAM6 433 aaPredicted RBP1.13□□□□□ -2.23
PRPF39-208ENST00000554785 TMEM161BQ8NDZ6 487 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 WFDC11Q8NEX6 87 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 OR5AU1Q8NGC0 362 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 OR5B17Q8NGF7 314 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 C2orf15Q8WU43 125 aaKnown RBP1.13□□□□□ -2.23
PRPF39-208ENST00000554785 GTSF1Q8WW33 167 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 KIFAP3Q92845 792 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 DHTKD1Q96HY7 919 aaPredicted RBP1.13□□□□□ -2.23
PRPF39-208ENST00000554785 PKMYT1Q99640 499 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 ACBD6Q9BR61 282 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 FEM1AQ9BSK4 669 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 NUDT9Q9BW91 350 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 ZNF416Q9BWM5 594 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 TM2D1Q9BX74 207 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 MRPL13Q9BYD1 178 aaKnown RBP1.13□□□□□ -2.23
PRPF39-208ENST00000554785 GSDMCQ9BYG8 508 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 ING2Q9H160 280 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 GLT8D2Q9H1C3 349 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 SLC25A51Q9H1U9 297 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 LRRN3Q9H3W5 708 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 ZSCAN16Q9H4T2 348 aaPredicted RBP1.13□□□□□ -2.23
PRPF39-208ENST00000554785 WDR76Q9H967 626 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 SGK2Q9HBY8 427 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 DMAP1Q9NPF5 467 aaPredicted RBP1.13□□□□□ -2.23
PRPF39-208ENST00000554785 DYRK4Q9NR20 520 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 SLC39A1Q9NY26 324 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 UTP6Q9NYH9 597 aaKnown RBP1.13□□□□□ -2.23
PRPF39-208ENST00000554785 EHFQ9NZC4 300 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 SLC2A6Q9UGQ3 507 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 CYTH4Q9UIA0 394 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 XPO7Q9UIA9 1087 aaKnown RBP1.13□□□□□ -2.23
PRPF39-208ENST00000554785 B9D1Q9UPM9 204 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 KMT2CQ8NEZ4 4911 aaKnown RBP1.13□□□□□ -2.23
PRPF39-208ENST00000554785 SNRNP200O75643 2136 aaKnown RBP1.13□□□□□ -2.23
PRPF39-208ENST00000554785 ABCA1O95477 2261 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 ROS1P08922 2347 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 IGHV5-10-1A0A0J9YXX1 117 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 SPTY2D1-AS1A0A0U1RR47 76 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 FRG2CA6NGY1 282 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 ZSCAN5BA6NJL1 495 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 FAM74A7A6NL05 159 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 MAPK13O15264 365 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 NVLO15381 856 aaKnown RBP1.13□□□□□ -2.23
PRPF39-208ENST00000554785 NOL3O60936 208 aaKnown RBP1.13□□□□□ -2.23
PRPF39-208ENST00000554785 KIAA0754O94854 1291 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 MFN2O95140 757 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 ADCY5O95622 1261 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 MBD3O95983 291 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 IGLV3-19P01714 112 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 CSF2P04141 144 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 KRT6BP04259 564 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 CTSLP07711 333 aa1.13□□□□□ -2.23
PRPF39-208ENST00000554785 UQCRHP07919 91 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms