RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 VHLLQ6RSH7 139 aa9.29□□□□□ -0.92
SHMT2-213ENST00000554600 PRSS57Q6UWY2 283 aa9.29□□□□□ -0.92
SHMT2-213ENST00000554600 HDDC2Q7Z4H3 204 aa9.29□□□□□ -0.92
SHMT2-213ENST00000554600 MDP1Q86V88 176 aa9.29□□□□□ -0.92
SHMT2-213ENST00000554600 MEX3DQ86XN8 651 aaKnown RBP9.29□□□□□ -0.92
SHMT2-213ENST00000554600 NRMQ8IXM6 262 aa9.29□□□□□ -0.92
SHMT2-213ENST00000554600 CCDC36Q8IYA8 594 aa9.29□□□□□ -0.92
SHMT2-213ENST00000554600 CDK20Q8IZL9 346 aa9.29□□□□□ -0.92
SHMT2-213ENST00000554600 SYT14Q8NB59 555 aa9.29□□□□□ -0.92
SHMT2-213ENST00000554600 RBM15BQ8NDT2 890 aaKnown RBP9.29□□□□□ -0.92
SHMT2-213ENST00000554600 OR6X1Q8NH79 312 aa9.29□□□□□ -0.92
SHMT2-213ENST00000554600 MOSPD2Q8NHP6 518 aa9.29□□□□□ -0.92
SHMT2-213ENST00000554600 NANOS1Q8WY41 292 aaKnown RBP9.29□□□□□ -0.92
SHMT2-213ENST00000554600 BPIFA2Q96DR5 249 aa9.29□□□□□ -0.92
SHMT2-213ENST00000554600 FBXO17Q96EF6 278 aa9.29□□□□□ -0.92
SHMT2-213ENST00000554600 SLC25A44Q96H78 314 aaPredicted RBP9.29□□□□□ -0.92
SHMT2-213ENST00000554600 C18orf12Q96KH6 178 aa9.29□□□□□ -0.92
SHMT2-213ENST00000554600 CCT8L2Q96SF2 557 aa9.29□□□□□ -0.92
SHMT2-213ENST00000554600 FOXB1Q99853 325 aa9.29□□□□□ -0.92
SHMT2-213ENST00000554600 CACNG6Q9BXT2 260 aa9.29□□□□□ -0.92
SHMT2-213ENST00000554600 MOV10Q9HCE1 1003 aaKnown RBP9.29□□□□□ -0.92
SHMT2-213ENST00000554600 FAM53CQ9NYF3 392 aa9.29□□□□□ -0.92
SHMT2-213ENST00000554600 GLTPQ9NZD2 209 aa9.29□□□□□ -0.92
SHMT2-213ENST00000554600 SAMD4AQ9UPU9 718 aaKnown RBP9.29□□□□□ -0.92
SHMT2-213ENST00000554600 NSD1Q96L73 2696 aaPredicted RBP9.28□□□□□ -0.92
SHMT2-213ENST00000554600 EFCAB9A8MZ26 197 aa9.28□□□□□ -0.92
SHMT2-213ENST00000554600 OVOL3O00110 214 aa9.28□□□□□ -0.92
SHMT2-213ENST00000554600 NDUFS7O75251 213 aa9.28□□□□□ -0.92
SHMT2-213ENST00000554600 RAB36O95755 333 aa9.28□□□□□ -0.92
SHMT2-213ENST00000554600 CD8AP01732 235 aa9.28□□□□□ -0.92
SHMT2-213ENST00000554600 HLA-HP01893 362 aa9.28□□□□□ -0.92
SHMT2-213ENST00000554600 INHBBP09529 407 aa9.28□□□□□ -0.92
SHMT2-213ENST00000554600 BMP4P12644 408 aa9.28□□□□□ -0.92
SHMT2-213ENST00000554600 CBR1P16152 277 aa9.28□□□□□ -0.92
SHMT2-213ENST00000554600 APOBEC3AP31941 199 aaPredicted RBP9.28□□□□□ -0.92
SHMT2-213ENST00000554600 MSX2P35548 267 aaPredicted RBP9.28□□□□□ -0.92
SHMT2-213ENST00000554600 ARR3P36575 388 aa9.28□□□□□ -0.92
SHMT2-213ENST00000554600 GPR4P46093 362 aa9.28□□□□□ -0.92
SHMT2-213ENST00000554600 ZNF84P51523 738 aa9.28□□□□□ -0.92
SHMT2-213ENST00000554600 NAAAQ02083 359 aa9.28□□□□□ -0.92
SHMT2-213ENST00000554600 CHRNB3Q05901 458 aa9.28□□□□□ -0.92
SHMT2-213ENST00000554600 KRT72Q14CN4 511 aa9.28□□□□□ -0.92
SHMT2-213ENST00000554600 LAPTM4AQ15012 233 aa9.28□□□□□ -0.92
SHMT2-213ENST00000554600 GSG1Q2KHT4 349 aa9.28□□□□□ -0.92
SHMT2-213ENST00000554600 ALG10Q5BKT4 473 aa9.28□□□□□ -0.92
SHMT2-213ENST00000554600 FGD3Q5JSP0 725 aa9.28□□□□□ -0.92
SHMT2-213ENST00000554600 SAMD4BQ5PRF9 694 aaKnown RBP9.28□□□□□ -0.92
SHMT2-213ENST00000554600 GKAP1Q5VSY0 366 aaPredicted RBP9.28□□□□□ -0.92
SHMT2-213ENST00000554600 ZNF544Q6NX49 715 aa9.28□□□□□ -0.92
SHMT2-213ENST00000554600 C16orf89Q6UX73 402 aa9.28□□□□□ -0.92
SHMT2-213ENST00000554600 NHLRC1Q6VVB1 395 aa9.28□□□□□ -0.92
SHMT2-213ENST00000554600 Q71RC1 249 aaPredicted RBP9.28□□□□□ -0.92
SHMT2-213ENST00000554600 DTX2Q86UW9 622 aa9.28□□□□□ -0.92
SHMT2-213ENST00000554600 DEFB107AQ8IZN7 70 aa9.28□□□□□ -0.92
SHMT2-213ENST00000554600 PGAM4Q8N0Y7 254 aa9.28□□□□□ -0.92
SHMT2-213ENST00000554600 OR51A7Q8NH64 312 aa9.28□□□□□ -0.92
SHMT2-213ENST00000554600 TMEM54Q969K7 222 aa9.28□□□□□ -0.92
SHMT2-213ENST00000554600 BOD1Q96IK1 185 aa9.28□□□□□ -0.92
SHMT2-213ENST00000554600 CDRT15Q96T59 188 aa9.28□□□□□ -0.92
SHMT2-213ENST00000554600 KATNB1Q9BVA0 655 aa9.28□□□□□ -0.92
SHMT2-213ENST00000554600 GSX1Q9H4S2 264 aaPredicted RBP9.28□□□□□ -0.92
SHMT2-213ENST00000554600 SEC61A2Q9H9S3 476 aa9.28□□□□□ -0.92
SHMT2-213ENST00000554600 NDE1Q9NXR1 346 aa9.28□□□□□ -0.92
SHMT2-213ENST00000554600 GDF2Q9UK05 429 aaPredicted RBP9.28□□□□□ -0.92
SHMT2-213ENST00000554600 ENPP4Q9Y6X5 453 aa9.28□□□□□ -0.92
SHMT2-213ENST00000554600 SONP18583 2426 aaKnown RBP9.28□□□□□ -0.92
SHMT2-213ENST00000554600 HIVEP2P31629 2446 aa9.28□□□□□ -0.92
SHMT2-213ENST00000554600 ZANQ9Y493 2812 aa9.28□□□□□ -0.92
SHMT2-213ENST00000554600 TRAV27A0A087WT01 109 aa9.27□□□□□ -0.93
SHMT2-213ENST00000554600 ZNF503-AS2A6NEH8 195 aa9.27□□□□□ -0.93
SHMT2-213ENST00000554600 hCG_2039718K7EN88 272 aa9.27□□□□□ -0.93
SHMT2-213ENST00000554600 FFAR1O14842 300 aa9.27□□□□□ -0.93
SHMT2-213ENST00000554600 DHHO43323 396 aa9.27□□□□□ -0.93
SHMT2-213ENST00000554600 SSX4O60224 188 aa9.27□□□□□ -0.93
SHMT2-213ENST00000554600 ENTPD5O75356 428 aa9.27□□□□□ -0.93
SHMT2-213ENST00000554600 DIRAS1O95057 198 aa9.27□□□□□ -0.93
SHMT2-213ENST00000554600 FARS2O95363 451 aaKnown RBP9.27□□□□□ -0.93
SHMT2-213ENST00000554600 FAM107AO95990 144 aa9.27□□□□□ -0.93
SHMT2-213ENST00000554600 IGF2P01344 180 aa9.27□□□□□ -0.93
SHMT2-213ENST00000554600 IGHV4-39P01824 125 aa9.27□□□□□ -0.93
SHMT2-213ENST00000554600 H1F0P07305 194 aaKnown RBP9.27□□□□□ -0.93
SHMT2-213ENST00000554600 QDPRP09417 244 aa9.27□□□□□ -0.93
SHMT2-213ENST00000554600 PGA4P0DJD7 388 aa9.27□□□□□ -0.93
SHMT2-213ENST00000554600 PGA3P0DJD8 388 aa9.27□□□□□ -0.93
SHMT2-213ENST00000554600 PAX1P15863 534 aa9.27□□□□□ -0.93
SHMT2-213ENST00000554600 ACADSP16219 412 aa9.27□□□□□ -0.93
SHMT2-213ENST00000554600 MAKP20794 623 aa9.27□□□□□ -0.93
SHMT2-213ENST00000554600 FUT4P22083 530 aa9.27□□□□□ -0.93
SHMT2-213ENST00000554600 ACVR1BP36896 505 aa9.27□□□□□ -0.93
SHMT2-213ENST00000554600 GIPRP48546 466 aa9.27□□□□□ -0.93
SHMT2-213ENST00000554600 PTDSS1P48651 473 aaKnown RBP9.27□□□□□ -0.93
SHMT2-213ENST00000554600 MNAT1P51948 309 aa9.27□□□□□ -0.93
SHMT2-213ENST00000554600 NUDT6P53370 316 aa9.27□□□□□ -0.93
SHMT2-213ENST00000554600 LSM11P83369 360 aaKnown RBP eCLIP9.27□□□□□ -0.93
SHMT2-213ENST00000554600 PRKCDQ05655 676 aa9.27□□□□□ -0.93
SHMT2-213ENST00000554600 CD47Q08722 323 aa9.27□□□□□ -0.93
SHMT2-213ENST00000554600 RAB35Q15286 201 aa9.27□□□□□ -0.93
SHMT2-213ENST00000554600 CLEC12BQ2HXU8 276 aa9.27□□□□□ -0.93
SHMT2-213ENST00000554600 TBPL2Q6SJ96 375 aa9.27□□□□□ -0.93
SHMT2-213ENST00000554600 BIVMQ86UB2 503 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms