RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 HDHD2Q9H0R4 259 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 ZCCHC4Q9H5U6 513 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 ZNF337Q9Y3M9 751 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 CFAP47Q6ZTR5 3102 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 A0A1W2PPK0 400 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 SHISA3A0PJX4 238 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 PMS2P1A4D2B8 440 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 D6RAR5 112 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 LYRM1O43325 122 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 GPANK1O95872 356 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 TFP02787 698 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 OPN1LWP04000 364 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 SYPP08247 313 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 SLC2A5P22732 501 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 CXCR1P25024 350 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 ACVR1BP36896 505 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 GBX2P52951 348 aaPredicted RBP10.59□□□□□ -0.71
SHMT2-212ENST00000554467 INPP5JQ15735 1006 aaPredicted RBP10.59□□□□□ -0.71
SHMT2-212ENST00000554467 LEG1Q6P5S2 330 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 CNIH2Q6PI25 160 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 LRFN4Q6PJG9 635 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 OVCH1Q7RTY7 1134 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 Q8N402 240 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 MS4A3Q96HJ5 214 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 LPAR4Q99677 370 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 WDR77Q9BQA1 342 aaPredicted RBP10.59□□□□□ -0.71
SHMT2-212ENST00000554467 IER2Q9BTL4 223 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 MMP25Q9NPA2 562 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 VDAC3Q9Y277 283 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 NPFFR2Q9Y5X5 522 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 SLC22A31A6NKX4 558 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 SLC43A1O75387 559 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 IFNGP01579 166 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 ANKRD34CP0C6C1 535 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 CXCL3P19876 107 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 RPS27P42677 84 aaKnown RBP10.59□□□□□ -0.71
SHMT2-212ENST00000554467 CDKN2AP42771 156 aaKnown RBP10.59□□□□□ -0.71
SHMT2-212ENST00000554467 CTXN1P60606 82 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 BAMBIQ13145 260 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 TPBGQ13641 420 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 IDNKQ5T6J7 187 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.59□□□□□ -0.71
SHMT2-212ENST00000554467 ZNF440Q8IYI8 595 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 KDM8Q8N371 416 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 ZNF441Q8N8Z8 693 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 OR13C5Q8NGS8 318 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 KCNJ15Q99712 375 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 IFT46Q9NQC8 304 aa10.59□□□□□ -0.71
SHMT2-212ENST00000554467 FAM240BA0A1B0GVZ2 78 aa10.58□□□□□ -0.72
SHMT2-212ENST00000554467 DCAF7P61962 342 aa10.58□□□□□ -0.72
SHMT2-212ENST00000554467 ZNF85Q03923 595 aa10.58□□□□□ -0.72
SHMT2-212ENST00000554467 MRPL28Q13084 256 aaKnown RBP10.58□□□□□ -0.72
SHMT2-212ENST00000554467 TMEM44Q2T9K0 475 aa10.58□□□□□ -0.72
SHMT2-212ENST00000554467 IGSF11Q5DX21 431 aa10.58□□□□□ -0.72
SHMT2-212ENST00000554467 YOD1Q5VVQ6 348 aaPredicted RBP10.58□□□□□ -0.72
SHMT2-212ENST00000554467 TFAP2EQ6VUC0 442 aa10.58□□□□□ -0.72
SHMT2-212ENST00000554467 ZNF511Q8NB15 262 aa10.58□□□□□ -0.72
SHMT2-212ENST00000554467 C17orf47Q8NEP4 570 aa10.58□□□□□ -0.72
SHMT2-212ENST00000554467 NFAM1Q8NET5 270 aaPredicted RBP10.58□□□□□ -0.72
SHMT2-212ENST00000554467 OR6M1Q8NGM8 313 aa10.58□□□□□ -0.72
SHMT2-212ENST00000554467 OR5J2Q8NH18 312 aa10.58□□□□□ -0.72
SHMT2-212ENST00000554467 LAT2Q9GZY6 243 aa10.58□□□□□ -0.72
SHMT2-212ENST00000554467 SRA1Q9HD15 236 aaKnown RBP10.58□□□□□ -0.72
SHMT2-212ENST00000554467 ZC4H2Q9NQZ6 224 aa10.58□□□□□ -0.72
SHMT2-212ENST00000554467 MED11Q9P086 117 aa10.58□□□□□ -0.72
SHMT2-212ENST00000554467 ZMIZ1Q9ULJ6 1067 aa10.58□□□□□ -0.72
SHMT2-212ENST00000554467 MRPS7Q9Y2R9 242 aaKnown RBP10.58□□□□□ -0.72
SHMT2-212ENST00000554467 ALG1L2C9J202 215 aa10.58□□□□□ -0.72
SHMT2-212ENST00000554467 PNMTP11086 282 aa10.58□□□□□ -0.72
SHMT2-212ENST00000554467 AHCYP23526 432 aa10.58□□□□□ -0.72
SHMT2-212ENST00000554467 ADH7P40394 386 aa10.58□□□□□ -0.72
SHMT2-212ENST00000554467 RPL18Q07020 188 aaKnown RBP10.58□□□□□ -0.72
SHMT2-212ENST00000554467 COL28A1Q2UY09 1125 aa10.58□□□□□ -0.72
SHMT2-212ENST00000554467 ALG10Q5BKT4 473 aa10.58□□□□□ -0.72
SHMT2-212ENST00000554467 ZNF385CQ66K41 422 aaPredicted RBP10.58□□□□□ -0.72
SHMT2-212ENST00000554467 DTWD2Q8NBA8 298 aa10.58□□□□□ -0.72
SHMT2-212ENST00000554467 NPEPL1Q8NDH3 523 aa10.58□□□□□ -0.72
SHMT2-212ENST00000554467 MR1Q95460 341 aa10.58□□□□□ -0.72
SHMT2-212ENST00000554467 TGIF2Q9GZN2 237 aa10.58□□□□□ -0.72
SHMT2-212ENST00000554467 ENAMQ9NRM1 1142 aa10.58□□□□□ -0.72
SHMT2-212ENST00000554467 RALGAPA1Q6GYQ0 2036 aa10.58□□□□□ -0.72
SHMT2-212ENST00000554467 TMEM200CA6NKL6 621 aa10.58□□□□□ -0.72
SHMT2-212ENST00000554467 DCTN6O00399 190 aa10.58□□□□□ -0.72
SHMT2-212ENST00000554467 FADS1O60427 444 aa10.58□□□□□ -0.72
SHMT2-212ENST00000554467 OR2J2O76002 312 aa10.58□□□□□ -0.72
SHMT2-212ENST00000554467 CER1O95813 267 aa10.58□□□□□ -0.72
SHMT2-212ENST00000554467 ACSM4P0C7M7 580 aa10.58□□□□□ -0.72
SHMT2-212ENST00000554467 STPG2Q8N412 459 aa10.58□□□□□ -0.72
SHMT2-212ENST00000554467 ZNF175Q9Y473 711 aa10.58□□□□□ -0.72
SHMT2-212ENST00000554467 IGLV3-12A0A075B6K2 115 aa10.57□□□□□ -0.72
SHMT2-212ENST00000554467 M0R296 226 aa10.57□□□□□ -0.72
SHMT2-212ENST00000554467 GABRPO00591 440 aa10.57□□□□□ -0.72
SHMT2-212ENST00000554467 IL11P20809 199 aa10.57□□□□□ -0.72
SHMT2-212ENST00000554467 GABRA5P31644 462 aa10.57□□□□□ -0.72
SHMT2-212ENST00000554467 NRG3P56975 720 aa10.57□□□□□ -0.72
SHMT2-212ENST00000554467 ZSWIM7Q19AV6 140 aa10.57□□□□□ -0.72
SHMT2-212ENST00000554467 DPY19L2P2Q6ZN68 376 aa10.57□□□□□ -0.72
SHMT2-212ENST00000554467 GDPGP1Q6ZNW5 385 aa10.57□□□□□ -0.72
SHMT2-212ENST00000554467 KRT74Q7RTS7 529 aa10.57□□□□□ -0.72
SHMT2-212ENST00000554467 ULBP3Q9BZM4 244 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms