RNA–Protein interactions for RNA: ENST00000554124.2

STRN3-204, Transcript of striatin 3, humanhuman

TSL 4

Gene STRN3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-204ENST00000554124 TRIM4Q9C037 500 aa3.06□□□□□ -1.92
STRN3-204ENST00000554124 WWP1Q9H0M0 922 aa3.06□□□□□ -1.92
STRN3-204ENST00000554124 ABCG4Q9H172 646 aa3.06□□□□□ -1.92
STRN3-204ENST00000554124 OR2AG1Q9H205 316 aa3.06□□□□□ -1.92
STRN3-204ENST00000554124 SLC26A1Q9H2B4 701 aa3.06□□□□□ -1.92
STRN3-204ENST00000554124 DCLRE1BQ9H816 532 aa3.06□□□□□ -1.92
STRN3-204ENST00000554124 COG4Q9H9E3 785 aa3.06□□□□□ -1.92
STRN3-204ENST00000554124 FANCEQ9HB96 536 aa3.06□□□□□ -1.92
STRN3-204ENST00000554124 GPN1Q9HCN4 374 aaPredicted RBP3.06□□□□□ -1.92
STRN3-204ENST00000554124 MRPL40Q9NQ50 206 aaKnown RBP3.06□□□□□ -1.92
STRN3-204ENST00000554124 DDX28Q9NUL7 540 aaKnown RBP3.06□□□□□ -1.92
STRN3-204ENST00000554124 MS4A12Q9NXJ0 267 aa3.06□□□□□ -1.92
STRN3-204ENST00000554124 ATXN10Q9UBB4 475 aa3.06□□□□□ -1.92
STRN3-204ENST00000554124 OPTCQ9UBM4 332 aa3.06□□□□□ -1.92
STRN3-204ENST00000554124 APOBEC3BQ9UH17 382 aaKnown RBP3.06□□□□□ -1.92
STRN3-204ENST00000554124 PTBP2Q9UKA9 531 aaKnown RBP3.06□□□□□ -1.92
STRN3-204ENST00000554124 PLCL2Q9UPR0 1127 aa3.06□□□□□ -1.92
STRN3-204ENST00000554124 AP1M2Q9Y6Q5 423 aa3.06□□□□□ -1.92
STRN3-204ENST00000554124 UNC13CQ8NB66 2214 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 TDRD6O60522 2096 aaKnown RBP3.05□□□□□ -1.92
STRN3-204ENST00000554124 PCNX3Q9H6A9 2034 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 IGHV4-30-2A0A087WSY4 118 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 IGHV3-38A0A0C4DH36 116 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 A0A1B0GVG6 124 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 TMEM120BA0PK00 339 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 CFAP73A6NFT4 308 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 H0YIV9 168 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 SLC31A1O15431 190 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 DUX1O43812 170 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 CCDC22O60826 627 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 SHOX2O60902 331 aaPredicted RBP3.05□□□□□ -1.92
STRN3-204ENST00000554124 DCTN3O75935 186 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 SEMA3DO95025 777 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 C1orf105O95561 183 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 FAM107AO95990 144 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 PCCBP05166 539 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 DCNP07585 359 aaKnown RBP3.05□□□□□ -1.92
STRN3-204ENST00000554124 BPGMP07738 259 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 ACADSP16219 412 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 ZNF24P17028 368 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 CSRP1P21291 193 aaKnown RBP3.05□□□□□ -1.92
STRN3-204ENST00000554124 GCAP28676 217 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 PDHA2P29803 388 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 CMPK1P30085 196 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 PPP2R1BP30154 601 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 CCR7P32248 378 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 MDH1P40925 334 aaKnown RBP3.05□□□□□ -1.92
STRN3-204ENST00000554124 ACTR1BP42025 376 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 MRPL19P49406 292 aaKnown RBP3.05□□□□□ -1.92
STRN3-204ENST00000554124 RPL14P50914 215 aaKnown RBP3.05□□□□□ -1.92
STRN3-204ENST00000554124 TAS2R39P59534 338 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 ACTR1AP61163 376 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 STXBP1P61764 594 aaKnown RBP3.05□□□□□ -1.92
STRN3-204ENST00000554124 RPS15AP62244 130 aaKnown RBP3.05□□□□□ -1.92
STRN3-204ENST00000554124 GALK2Q01415 458 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 ACY1Q03154 408 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 PRDX1Q06830 199 aaKnown RBP3.05□□□□□ -1.92
STRN3-204ENST00000554124 STX3Q13277 289 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 MAPRE2Q15555 327 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 SNCBQ16143 134 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 NDUFA9Q16795 377 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 PPP1R3AQ16821 1122 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 ZNF658BQ4V348 819 aaPredicted RBP3.05□□□□□ -1.92
STRN3-204ENST00000554124 SPIN4Q56A73 249 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 PRAMEF7Q5VXH5 474 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 ZYG11AQ6WRX3 759 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 CYHR1Q6ZMK1 362 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 GCNT7Q6ZNI0 430 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 TAF8Q7Z7C8 310 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 LRRTM1Q86UE6 522 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.05□□□□□ -1.92
STRN3-204ENST00000554124 PHC2Q8IXK0 858 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 PIANPQ8IYJ0 282 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 OR4C6Q8NH72 309 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 SKA2Q8WVK7 121 aaPredicted RBP3.05□□□□□ -1.92
STRN3-204ENST00000554124 LIPHQ8WWY8 451 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 HIST1H2ACQ93077 130 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 DTNBP1Q96EV8 351 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 CHMP6Q96FZ7 201 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 PPP3R2Q96LZ3 170 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 NSMCE2Q96MF7 247 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 ZNF578Q96N58 590 aaPredicted RBP3.05□□□□□ -1.92
STRN3-204ENST00000554124 AGAP4Q96P64 663 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 ALKBH3Q96Q83 286 aaPredicted RBP3.05□□□□□ -1.92
STRN3-204ENST00000554124 ZNF382Q96SR6 550 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 GPR21Q99679 349 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 AIF1LQ9BQI0 150 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 OR52A5Q9H2C5 316 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 TM9SF3Q9HD45 589 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 SLC40A1Q9NP59 571 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 FBXO6Q9NRD1 293 aaPredicted RBP3.05□□□□□ -1.92
STRN3-204ENST00000554124 FAM120CQ9NX05 1096 aaKnown RBP3.05□□□□□ -1.92
STRN3-204ENST00000554124 TECRQ9NZ01 308 aaKnown RBP3.05□□□□□ -1.92
STRN3-204ENST00000554124 TBK1Q9UHD2 729 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 BCAP29Q9UHQ4 241 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 MRTO4Q9UKD2 239 aaKnown RBP3.05□□□□□ -1.92
STRN3-204ENST00000554124 PSME2Q9UL46 239 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 ASF1AQ9Y294 204 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 OR1A2Q9Y585 309 aa3.05□□□□□ -1.92
STRN3-204ENST00000554124 SPACA6W5XKT8 324 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms