RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 LIPHQ8WWY8 451 aa6.77□□□□□ -1.33
ABCD4-220ENST00000553998 ACOT11Q8WXI4 607 aaPredicted RBP6.77□□□□□ -1.33
ABCD4-220ENST00000553998 MSI2Q96DH6 328 aaKnown RBP6.77□□□□□ -1.33
ABCD4-220ENST00000553998 KTI12Q96EK9 354 aaPredicted RBP6.77□□□□□ -1.33
ABCD4-220ENST00000553998 RSRC1Q96IZ7 334 aaKnown RBP6.77□□□□□ -1.33
ABCD4-220ENST00000553998 SF3B5Q9BWJ5 86 aaKnown RBP6.77□□□□□ -1.33
ABCD4-220ENST00000553998 SRXN1Q9BYN0 137 aa6.77□□□□□ -1.33
ABCD4-220ENST00000553998 C12orf49Q9H741 205 aa6.77□□□□□ -1.33
ABCD4-220ENST00000553998 FKRPQ9H9S5 495 aa6.77□□□□□ -1.33
ABCD4-220ENST00000553998 KRCC1Q9NPI7 259 aaPredicted RBP6.77□□□□□ -1.33
ABCD4-220ENST00000553998 MAN2C1Q9NTJ4 1040 aa6.77□□□□□ -1.33
ABCD4-220ENST00000553998 KLHL9Q9P2J3 617 aa6.77□□□□□ -1.33
ABCD4-220ENST00000553998 KLHL13Q9P2N7 655 aa6.77□□□□□ -1.33
ABCD4-220ENST00000553998 MGAT4BQ9UQ53 548 aa6.77□□□□□ -1.33
ABCD4-220ENST00000553998 RASD1Q9Y272 281 aa6.77□□□□□ -1.33
ABCD4-220ENST00000553998 IGKV3D-15A0A087WSY6 115 aa6.76□□□□□ -1.33
ABCD4-220ENST00000553998 A0A087WUU8 490 aa6.76□□□□□ -1.33
ABCD4-220ENST00000553998 LOC100289279A0A1B0GTE1 492 aa6.76□□□□□ -1.33
ABCD4-220ENST00000553998 LOC102725191A0A1B0GVB3 256 aa6.76□□□□□ -1.33
ABCD4-220ENST00000553998 AQP7P3A6NL99 342 aa6.76□□□□□ -1.33
ABCD4-220ENST00000553998 ZNF724A8MTY0 619 aa6.76□□□□□ -1.33
ABCD4-220ENST00000553998 NDUFS8O00217 210 aa6.76□□□□□ -1.33
ABCD4-220ENST00000553998 GPR171O14626 319 aa6.76□□□□□ -1.33
ABCD4-220ENST00000553998 ABCD4O14678 606 aa6.76□□□□□ -1.33
ABCD4-220ENST00000553998 SMAD9O15198 467 aaKnown RBP6.76□□□□□ -1.33
ABCD4-220ENST00000553998 TCF21O43680 179 aa6.76□□□□□ -1.33
ABCD4-220ENST00000553998 CYTIPO60759 359 aa6.76□□□□□ -1.33
ABCD4-220ENST00000553998 FKBP6O75344 327 aa6.76□□□□□ -1.33
ABCD4-220ENST00000553998 GADD45GO95257 159 aa6.76□□□□□ -1.33
ABCD4-220ENST00000553998 BGLAPP02818 100 aa6.76□□□□□ -1.33
ABCD4-220ENST00000553998 FCGR1AP12314 374 aa6.76□□□□□ -1.33
ABCD4-220ENST00000553998 HNF1AP20823 631 aa6.76□□□□□ -1.33
ABCD4-220ENST00000553998 PTNP21246 168 aa6.76□□□□□ -1.33
ABCD4-220ENST00000553998 RRM2P31350 389 aa6.76□□□□□ -1.33
ABCD4-220ENST00000553998 IFNGR2P38484 337 aa6.76□□□□□ -1.33
ABCD4-220ENST00000553998 RPS5P46782 204 aaKnown RBP6.76□□□□□ -1.33
ABCD4-220ENST00000553998 LIMS1P48059 325 aa6.76□□□□□ -1.33
ABCD4-220ENST00000553998 SLC16A1P53985 500 aa6.76□□□□□ -1.33
ABCD4-220ENST00000553998 UGT2B15P54855 530 aa6.76□□□□□ -1.33
ABCD4-220ENST00000553998 SPIBQ01892 262 aa6.76□□□□□ -1.33
ABCD4-220ENST00000553998 CCNIQ14094 377 aa6.76□□□□□ -1.33
ABCD4-220ENST00000553998 OR7A5Q15622 319 aa6.76□□□□□ -1.33
ABCD4-220ENST00000553998 ZNF74Q16587 644 aa6.76□□□□□ -1.33
ABCD4-220ENST00000553998 ANKDD1AQ495B1 522 aa6.76□□□□□ -1.33
ABCD4-220ENST00000553998 FGD3Q5JSP0 725 aa6.76□□□□□ -1.33
ABCD4-220ENST00000553998 OTUD3Q5T2D3 398 aaPredicted RBP6.76□□□□□ -1.33
ABCD4-220ENST00000553998 OR2T5Q6IEZ7 315 aa6.76□□□□□ -1.33
ABCD4-220ENST00000553998 ZNF544Q6NX49 715 aa6.76□□□□□ -1.33
ABCD4-220ENST00000553998 ZFP1Q6P2D0 407 aa6.76□□□□□ -1.33
ABCD4-220ENST00000553998 ZNF730Q6ZMV8 503 aa6.76□□□□□ -1.33
ABCD4-220ENST00000553998 H1FNTQ75WM6 255 aaPredicted RBP6.76□□□□□ -1.33
ABCD4-220ENST00000553998 RRM2BQ7LG56 351 aa6.76□□□□□ -1.33
ABCD4-220ENST00000553998 BHLHA15Q7RTS1 189 aaPredicted RBP6.76□□□□□ -1.33
ABCD4-220ENST00000553998 CDK20Q8IZL9 346 aa6.76□□□□□ -1.33
ABCD4-220ENST00000553998 MUC15Q8N387 334 aa6.76□□□□□ -1.33
ABCD4-220ENST00000553998 LINC00471Q8N535 108 aa6.76□□□□□ -1.33
ABCD4-220ENST00000553998 OR2T29Q8NH02 315 aa6.76□□□□□ -1.33
ABCD4-220ENST00000553998 SGMS2Q8NHU3 365 aa6.76□□□□□ -1.33
ABCD4-220ENST00000553998 TMEM255BQ8WV15 326 aa6.76□□□□□ -1.33
ABCD4-220ENST00000553998 TAAR8Q969N4 342 aa6.76□□□□□ -1.33
ABCD4-220ENST00000553998 SLC25A36Q96CQ1 311 aa6.76□□□□□ -1.33
ABCD4-220ENST00000553998 SGTBQ96EQ0 304 aa6.76□□□□□ -1.33
ABCD4-220ENST00000553998 FUZQ9BT04 418 aa6.76□□□□□ -1.33
ABCD4-220ENST00000553998 ASPNQ9BXN1 380 aa6.76□□□□□ -1.33
ABCD4-220ENST00000553998 BCO1Q9HAY6 547 aa6.76□□□□□ -1.33
ABCD4-220ENST00000553998 MEPEQ9NQ76 525 aaPredicted RBP6.76□□□□□ -1.33
ABCD4-220ENST00000553998 ARMC1Q9NVT9 282 aa6.76□□□□□ -1.33
ABCD4-220ENST00000553998 MRPL39Q9NYK5 338 aaKnown RBP6.76□□□□□ -1.33
ABCD4-220ENST00000553998 NPAP1Q9NZP6 1156 aa6.76□□□□□ -1.33
ABCD4-220ENST00000553998 EMC3Q9P0I2 261 aa6.76□□□□□ -1.33
ABCD4-220ENST00000553998 RHCGQ9UBD6 479 aa6.76□□□□□ -1.33
ABCD4-220ENST00000553998 ZNF229Q9UJW7 825 aa6.76□□□□□ -1.33
ABCD4-220ENST00000553998 ING1Q9UK53 422 aaPredicted RBP6.76□□□□□ -1.33
ABCD4-220ENST00000553998 TMEM5Q9Y2B1 443 aa6.76□□□□□ -1.33
ABCD4-220ENST00000553998 HEATR1Q9H583 2144 aaKnown RBP6.76□□□□□ -1.33
ABCD4-220ENST00000553998 A0A0A6YYJ9 748 aa6.75□□□□□ -1.33
ABCD4-220ENST00000553998 TRBV4-1A0A0J9YWV2 114 aa6.75□□□□□ -1.33
ABCD4-220ENST00000553998 SH3PXD2BA1X283 911 aa6.75□□□□□ -1.33
ABCD4-220ENST00000553998 ARRDC5A6NEK1 342 aa6.75□□□□□ -1.33
ABCD4-220ENST00000553998 M0R082 166 aa6.75□□□□□ -1.33
ABCD4-220ENST00000553998 TNFRSF11BO00300 401 aa6.75□□□□□ -1.33
ABCD4-220ENST00000553998 KPNA4O00629 521 aaPredicted RBP6.75□□□□□ -1.33
ABCD4-220ENST00000553998 DEAF1O75398 565 aaPredicted RBP6.75□□□□□ -1.33
ABCD4-220ENST00000553998 OR7A10O76100 309 aa6.75□□□□□ -1.33
ABCD4-220ENST00000553998 DIRAS1O95057 198 aa6.75□□□□□ -1.33
ABCD4-220ENST00000553998 AKR7A3O95154 331 aa6.75□□□□□ -1.33
ABCD4-220ENST00000553998 CH25HO95992 272 aa6.75□□□□□ -1.33
ABCD4-220ENST00000553998 CST1P01037 141 aa6.75□□□□□ -1.33
ABCD4-220ENST00000553998 HIST1H2ABP04908 130 aa6.75□□□□□ -1.33
ABCD4-220ENST00000553998 ASAH2BP0C7U1 165 aa6.75□□□□□ -1.33
ABCD4-220ENST00000553998 FUT1P19526 365 aa6.75□□□□□ -1.33
ABCD4-220ENST00000553998 COX5AP20674 150 aa6.75□□□□□ -1.33
ABCD4-220ENST00000553998 PTAFRP25105 342 aa6.75□□□□□ -1.33
ABCD4-220ENST00000553998 GRPRP30550 384 aa6.75□□□□□ -1.33
ABCD4-220ENST00000553998 NR4A2P43354 598 aa6.75□□□□□ -1.33
ABCD4-220ENST00000553998 OR3A2P47893 321 aa6.75□□□□□ -1.33
ABCD4-220ENST00000553998 P2RY4P51582 365 aa6.75□□□□□ -1.33
ABCD4-220ENST00000553998 PRKCDQ05655 676 aa6.75□□□□□ -1.33
ABCD4-220ENST00000553998 RASGEF1BQ0VAM2 473 aa6.75□□□□□ -1.33
ABCD4-220ENST00000553998 SLC17A1Q14916 467 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms