RNA–Protein interactions for RNA: ENST00000553816.5

RDH11-205, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2

Gene RDH11, Length 1,163 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-205ENST00000553816 LRFN4Q6PJG9 635 aa7.16□□□□□ -1.26
RDH11-205ENST00000553816 SHISA2Q6UWI4 295 aa7.16□□□□□ -1.26
RDH11-205ENST00000553816 ZNF730Q6ZMV8 503 aa7.16□□□□□ -1.26
RDH11-205ENST00000553816 MBOAT2Q6ZWT7 520 aa7.16□□□□□ -1.26
RDH11-205ENST00000553816 IGFN1Q86VF2 1251 aa7.16□□□□□ -1.26
RDH11-205ENST00000553816 P2RY8Q86VZ1 359 aa7.16□□□□□ -1.26
RDH11-205ENST00000553816 GPR137CQ8N3F9 429 aa7.16□□□□□ -1.26
RDH11-205ENST00000553816 LRRC75AQ8NAA5 344 aa7.16□□□□□ -1.26
RDH11-205ENST00000553816 C1orf162Q8NEQ5 155 aaPredicted RBP7.16□□□□□ -1.26
RDH11-205ENST00000553816 OR13C2Q8NGS9 318 aa7.16□□□□□ -1.26
RDH11-205ENST00000553816 OR52J3Q8NH60 311 aa7.16□□□□□ -1.26
RDH11-205ENST00000553816 IGFBPL1Q8WX77 278 aa7.16□□□□□ -1.26
RDH11-205ENST00000553816 ASB10Q8WXI3 467 aa7.16□□□□□ -1.26
RDH11-205ENST00000553816 ACOT11Q8WXI4 607 aaPredicted RBP7.16□□□□□ -1.26
RDH11-205ENST00000553816 AKAP1Q92667 903 aaKnown RBP eCLIP7.16□□□□□ -1.26
RDH11-205ENST00000553816 HTRA1Q92743 480 aa7.16□□□□□ -1.26
RDH11-205ENST00000553816 TMEM54Q969K7 222 aa7.16□□□□□ -1.26
RDH11-205ENST00000553816 MUCL1Q96DR8 90 aa7.16□□□□□ -1.26
RDH11-205ENST00000553816 BOD1Q96IK1 185 aa7.16□□□□□ -1.26
RDH11-205ENST00000553816 FAM46AQ96IP4 442 aaKnown RBP7.16□□□□□ -1.26
RDH11-205ENST00000553816 DHRS1Q96LJ7 313 aa7.16□□□□□ -1.26
RDH11-205ENST00000553816 TNFRSF13CQ96RJ3 184 aa7.16□□□□□ -1.26
RDH11-205ENST00000553816 SEPHS2Q99611 448 aa7.16□□□□□ -1.26
RDH11-205ENST00000553816 GPA33Q99795 319 aa7.16□□□□□ -1.26
RDH11-205ENST00000553816 KRTAP4-7Q9BYR0 210 aa7.16□□□□□ -1.26
RDH11-205ENST00000553816 C1orf21Q9H246 121 aa7.16□□□□□ -1.26
RDH11-205ENST00000553816 SEC61A2Q9H9S3 476 aa7.16□□□□□ -1.26
RDH11-205ENST00000553816 NOX3Q9HBY0 568 aa7.16□□□□□ -1.26
RDH11-205ENST00000553816 ZNF224Q9NZL3 707 aa7.16□□□□□ -1.26
RDH11-205ENST00000553816 ACTR3BQ9P1U1 418 aa7.16□□□□□ -1.26
RDH11-205ENST00000553816 RNF115Q9Y4L5 304 aa7.16□□□□□ -1.26
RDH11-205ENST00000553816 ZNF469Q96JG9 3925 aaPredicted RBP7.16□□□□□ -1.26
RDH11-205ENST00000553816 PRRC2AP48634 2157 aaKnown RBP7.15□□□□□ -1.26
RDH11-205ENST00000553816 IGKV1D-43A0A0B4J1Z2 117 aa7.15□□□□□ -1.26
RDH11-205ENST00000553816 ZNF726A6NNF4 738 aa7.15□□□□□ -1.26
RDH11-205ENST00000553816 ZNF99A8MXY4 864 aaPredicted RBP7.15□□□□□ -1.26
RDH11-205ENST00000553816 M0R1B8 84 aa7.15□□□□□ -1.26
RDH11-205ENST00000553816 ABCD4O14678 606 aa7.15□□□□□ -1.26
RDH11-205ENST00000553816 GMNNO75496 209 aa7.15□□□□□ -1.26
RDH11-205ENST00000553816 TRMUO75648 421 aaKnown RBP7.15□□□□□ -1.26
RDH11-205ENST00000553816 HIST1H2ABP04908 130 aa7.15□□□□□ -1.26
RDH11-205ENST00000553816 H1F0P07305 194 aaKnown RBP7.15□□□□□ -1.26
RDH11-205ENST00000553816 CD3EP07766 207 aa7.15□□□□□ -1.26
RDH11-205ENST00000553816 CELA3BP08861 270 aa7.15□□□□□ -1.26
RDH11-205ENST00000553816 SAGP10523 405 aaPredicted RBP7.15□□□□□ -1.26
RDH11-205ENST00000553816 DNASE1P24855 282 aa7.15□□□□□ -1.26
RDH11-205ENST00000553816 CD40P25942 277 aa7.15□□□□□ -1.26
RDH11-205ENST00000553816 OMPP47874 163 aa7.15□□□□□ -1.26
RDH11-205ENST00000553816 CSNK1A1P48729 337 aa7.15□□□□□ -1.26
RDH11-205ENST00000553816 NR1H2P55055 460 aa7.15□□□□□ -1.26
RDH11-205ENST00000553816 FXYD6P3P58550 94 aa7.15□□□□□ -1.26
RDH11-205ENST00000553816 MYBPC1Q00872 1141 aa7.15□□□□□ -1.26
RDH11-205ENST00000553816 PPP1R8Q12972 351 aaKnown RBP7.15□□□□□ -1.26
RDH11-205ENST00000553816 KEAP1Q14145 624 aa7.15□□□□□ -1.26
RDH11-205ENST00000553816 TRIM25Q14258 630 aaKnown RBP7.15□□□□□ -1.26
RDH11-205ENST00000553816 SPATS1Q496A3 300 aa7.15□□□□□ -1.26
RDH11-205ENST00000553816 ALG10Q5BKT4 473 aa7.15□□□□□ -1.26
RDH11-205ENST00000553816 FGD3Q5JSP0 725 aa7.15□□□□□ -1.26
RDH11-205ENST00000553816 ARMC4Q5T2S8 1044 aa7.15□□□□□ -1.26
RDH11-205ENST00000553816 LCN8Q6JVE9 175 aa7.15□□□□□ -1.26
RDH11-205ENST00000553816 KLHL24Q6TFL4 600 aa7.15□□□□□ -1.26
RDH11-205ENST00000553816 B3GLCTQ6Y288 498 aa7.15□□□□□ -1.26
RDH11-205ENST00000553816 TMPRSS11FQ6ZWK6 438 aa7.15□□□□□ -1.26
RDH11-205ENST00000553816 HIST3H2AQ7L7L0 130 aa7.15□□□□□ -1.26
RDH11-205ENST00000553816 ABHD12BQ7Z5M8 362 aaPredicted RBP7.15□□□□□ -1.26
RDH11-205ENST00000553816 LURAP1LQ8IV03 231 aa7.15□□□□□ -1.26
RDH11-205ENST00000553816 RNF113BQ8IZP6 322 aaKnown RBP7.15□□□□□ -1.26
RDH11-205ENST00000553816 C17orf78Q8N4C9 275 aa7.15□□□□□ -1.26
RDH11-205ENST00000553816 CLDN22Q8N7P3 220 aa7.15□□□□□ -1.26
RDH11-205ENST00000553816 SYT14Q8NB59 555 aa7.15□□□□□ -1.26
RDH11-205ENST00000553816 OR6N1Q8NGY5 312 aa7.15□□□□□ -1.26
RDH11-205ENST00000553816 OR51A7Q8NH64 312 aa7.15□□□□□ -1.26
RDH11-205ENST00000553816 OR6X1Q8NH79 312 aa7.15□□□□□ -1.26
RDH11-205ENST00000553816 FGFBP3Q8TAT2 258 aa7.15□□□□□ -1.26
RDH11-205ENST00000553816 HDAC2Q92769 488 aaKnown RBP7.15□□□□□ -1.26
RDH11-205ENST00000553816 NINJ1Q92982 152 aa7.15□□□□□ -1.26
RDH11-205ENST00000553816 HIST1H2ACQ93077 130 aa7.15□□□□□ -1.26
RDH11-205ENST00000553816 LRR1Q96L50 414 aa7.15□□□□□ -1.26
RDH11-205ENST00000553816 ZNF347Q96SE7 839 aa7.15□□□□□ -1.26
RDH11-205ENST00000553816 THTPAQ9BU02 230 aa7.15□□□□□ -1.26
RDH11-205ENST00000553816 MRPL13Q9BYD1 178 aaKnown RBP7.15□□□□□ -1.26
RDH11-205ENST00000553816 ESRP2Q9H6T0 727 aaKnown RBP7.15□□□□□ -1.26
RDH11-205ENST00000553816 NGBQ9NPG2 151 aa7.15□□□□□ -1.26
RDH11-205ENST00000553816 IL1RAPQ9NPH3 570 aa7.15□□□□□ -1.26
RDH11-205ENST00000553816 INIPQ9NRY2 104 aa7.15□□□□□ -1.26
RDH11-205ENST00000553816 ZNF346Q9UL40 294 aaKnown RBP7.15□□□□□ -1.26
RDH11-205ENST00000553816 HIF3AQ9Y2N7 669 aa7.15□□□□□ -1.26
RDH11-205ENST00000553816 AMDHD2Q9Y303 409 aa7.15□□□□□ -1.26
RDH11-205ENST00000553816 VPS13CQ709C8 3753 aa7.15□□□□□ -1.27
RDH11-205ENST00000553816 CADP27708 2225 aa7.15□□□□□ -1.27
RDH11-205ENST00000553816 AKAP6Q13023 2319 aa7.15□□□□□ -1.27
RDH11-205ENST00000553816 NAV2Q8IVL1 2488 aa7.15□□□□□ -1.27
RDH11-205ENST00000553816 ANKRD17O75179 2603 aaKnown RBP7.14□□□□□ -1.27
RDH11-205ENST00000553816 TACC2O95359 2948 aa7.14□□□□□ -1.27
RDH11-205ENST00000553816 ARPC4-TTLL3A0A0A6YYG9 625 aa7.14□□□□□ -1.27
RDH11-205ENST00000553816 IGHV1-18A0A0C4DH31 117 aa7.14□□□□□ -1.27
RDH11-205ENST00000553816 A0A1W2PRQ8 180 aa7.14□□□□□ -1.27
RDH11-205ENST00000553816 SH3PXD2BA1X283 911 aa7.14□□□□□ -1.27
RDH11-205ENST00000553816 OR6C65A6NJZ3 312 aa7.14□□□□□ -1.27
RDH11-205ENST00000553816 EFCAB9A8MZ26 197 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms