RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 ACBD4Q8NC06 268 aa12.19□□□□□ -0.46
TUBB3-202ENST00000553656 NOXO1Q8NFA2 376 aa12.19□□□□□ -0.46
TUBB3-202ENST00000553656 OR5K1Q8NHB7 308 aa12.19□□□□□ -0.46
TUBB3-202ENST00000553656 MARVELD3Q96A59 401 aa12.19□□□□□ -0.46
TUBB3-202ENST00000553656 MUCL1Q96DR8 90 aa12.19□□□□□ -0.46
TUBB3-202ENST00000553656 NRBF2Q96F24 287 aa12.19□□□□□ -0.46
TUBB3-202ENST00000553656 TSPAN32Q96QS1 320 aa12.19□□□□□ -0.46
TUBB3-202ENST00000553656 GPX7Q96SL4 187 aaPredicted RBP12.19□□□□□ -0.46
TUBB3-202ENST00000553656 FEVQ99581 238 aa12.19□□□□□ -0.46
TUBB3-202ENST00000553656 IFT27Q9BW83 186 aa12.19□□□□□ -0.46
TUBB3-202ENST00000553656 DGCR6LQ9BY27 220 aa12.19□□□□□ -0.46
TUBB3-202ENST00000553656 CRLF2Q9HC73 371 aa12.19□□□□□ -0.46
TUBB3-202ENST00000553656 GPR35Q9HC97 309 aa12.19□□□□□ -0.46
TUBB3-202ENST00000553656 TBC1D23Q9NUY8 699 aa12.19□□□□□ -0.46
TUBB3-202ENST00000553656 GLTPQ9NZD2 209 aa12.19□□□□□ -0.46
TUBB3-202ENST00000553656 IL20RAQ9UHF4 553 aa12.19□□□□□ -0.46
TUBB3-202ENST00000553656 POFUT2Q9Y2G5 429 aa12.19□□□□□ -0.46
TUBB3-202ENST00000553656 CDH10Q9Y6N8 788 aa12.19□□□□□ -0.46
TUBB3-202ENST00000553656 G3V2T6 193 aa12.18□□□□□ -0.46
TUBB3-202ENST00000553656 RPL36A-HNRNPH2H7BZ11 118 aa12.18□□□□□ -0.46
TUBB3-202ENST00000553656 PDLIM1O00151 329 aa12.18□□□□□ -0.46
TUBB3-202ENST00000553656 ENTPD5O75356 428 aa12.18□□□□□ -0.46
TUBB3-202ENST00000553656 TRMUO75648 421 aaKnown RBP12.18□□□□□ -0.46
TUBB3-202ENST00000553656 PPP1R3DO95685 299 aa12.18□□□□□ -0.46
TUBB3-202ENST00000553656 PGA4P0DJD7 388 aa12.18□□□□□ -0.46
TUBB3-202ENST00000553656 PGA3P0DJD8 388 aa12.18□□□□□ -0.46
TUBB3-202ENST00000553656 EPXP11678 715 aa12.18□□□□□ -0.46
TUBB3-202ENST00000553656 ANXA8P13928 327 aa12.18□□□□□ -0.46
TUBB3-202ENST00000553656 ZNF23P17027 643 aa12.18□□□□□ -0.46
TUBB3-202ENST00000553656 NOS3P29474 1203 aa12.18□□□□□ -0.46
TUBB3-202ENST00000553656 SDHAP31040 664 aa12.18□□□□□ -0.46
TUBB3-202ENST00000553656 COX10Q12887 443 aa12.18□□□□□ -0.46
TUBB3-202ENST00000553656 KRR1Q13601 381 aaKnown RBP12.18□□□□□ -0.46
TUBB3-202ENST00000553656 CEACAM16Q2WEN9 425 aa12.18□□□□□ -0.46
TUBB3-202ENST00000553656 TIMM23BQ5SRD1 257 aa12.18□□□□□ -0.46
TUBB3-202ENST00000553656 FBXW10Q5XX13 1052 aa12.18□□□□□ -0.46
TUBB3-202ENST00000553656 HIST2H2BCQ6DN03 193 aa12.18□□□□□ -0.46
TUBB3-202ENST00000553656 ALKBH2Q6NS38 261 aa12.18□□□□□ -0.46
TUBB3-202ENST00000553656 THSD4Q6ZMP0 1018 aa12.18□□□□□ -0.46
TUBB3-202ENST00000553656 RASSF6Q6ZTQ3 369 aa12.18□□□□□ -0.46
TUBB3-202ENST00000553656 AMIGO2Q86SJ2 522 aa12.18□□□□□ -0.46
TUBB3-202ENST00000553656 HIPK1Q86Z02 1210 aa12.18□□□□□ -0.46
TUBB3-202ENST00000553656 ZDHHC13Q8IUH4 622 aa12.18□□□□□ -0.46
TUBB3-202ENST00000553656 C17orf78Q8N4C9 275 aa12.18□□□□□ -0.46
TUBB3-202ENST00000553656 ARIH2OSQ8N7S6 290 aa12.18□□□□□ -0.46
TUBB3-202ENST00000553656 SYT14Q8NB59 555 aa12.18□□□□□ -0.46
TUBB3-202ENST00000553656 FNDC8Q8TC99 324 aa12.18□□□□□ -0.46
TUBB3-202ENST00000553656 LRTOMTQ8WZ04 291 aa12.18□□□□□ -0.46
TUBB3-202ENST00000553656 HSD17B8Q92506 261 aa12.18□□□□□ -0.46
TUBB3-202ENST00000553656 TMEM54Q969K7 222 aa12.18□□□□□ -0.46
TUBB3-202ENST00000553656 CENPNQ96H22 339 aaPredicted RBP12.18□□□□□ -0.46
TUBB3-202ENST00000553656 SAMD8Q96LT4 415 aa12.18□□□□□ -0.46
TUBB3-202ENST00000553656 WFIKKN1Q96NZ8 548 aa12.18□□□□□ -0.46
TUBB3-202ENST00000553656 ALG12Q9BV10 488 aa12.18□□□□□ -0.46
TUBB3-202ENST00000553656 NGBQ9NPG2 151 aa12.18□□□□□ -0.46
TUBB3-202ENST00000553656 NRIP3Q9NQ35 241 aa12.18□□□□□ -0.46
TUBB3-202ENST00000553656 ZNF346Q9UL40 294 aaKnown RBP12.18□□□□□ -0.46
TUBB3-202ENST00000553656 ADAM18Q9Y3Q7 739 aa12.18□□□□□ -0.46
TUBB3-202ENST00000553656 TEX13CA0A0J9YWL9 993 aa12.17□□□□□ -0.46
TUBB3-202ENST00000553656 OR5H1A6NKK0 313 aa12.17□□□□□ -0.46
TUBB3-202ENST00000553656 ZNF99A8MXY4 864 aaPredicted RBP12.17□□□□□ -0.46
TUBB3-202ENST00000553656 ARHGEF9O43307 516 aa12.17□□□□□ -0.46
TUBB3-202ENST00000553656 QDPRP09417 244 aa12.17□□□□□ -0.46
TUBB3-202ENST00000553656 APEHP13798 732 aaKnown RBP12.17□□□□□ -0.46
TUBB3-202ENST00000553656 ZNF26P17031 533 aaPredicted RBP12.17□□□□□ -0.46
TUBB3-202ENST00000553656 ZNF84P51523 738 aa12.17□□□□□ -0.46
TUBB3-202ENST00000553656 FOXG1P55316 489 aaPredicted RBP12.17□□□□□ -0.46
TUBB3-202ENST00000553656 UBE2NP61088 152 aaKnown RBP12.17□□□□□ -0.46
TUBB3-202ENST00000553656 RUNX1T1Q06455 604 aa12.17□□□□□ -0.46
TUBB3-202ENST00000553656 GABRA6Q16445 453 aa12.17□□□□□ -0.46
TUBB3-202ENST00000553656 CLEC12AQ5QGZ9 265 aa12.17□□□□□ -0.46
TUBB3-202ENST00000553656 PHYHD1Q5SRE7 291 aa12.17□□□□□ -0.46
TUBB3-202ENST00000553656 ZNF787Q6DD87 383 aa12.17□□□□□ -0.46
TUBB3-202ENST00000553656 ANKRD16Q6P6B7 361 aa12.17□□□□□ -0.46
TUBB3-202ENST00000553656 LINGO2Q7L985 606 aa12.17□□□□□ -0.46
TUBB3-202ENST00000553656 TMEM179BQ7Z7N9 219 aa12.17□□□□□ -0.46
TUBB3-202ENST00000553656 ADCK1Q86TW2 530 aa12.17□□□□□ -0.46
TUBB3-202ENST00000553656 WFDC8Q8IUA0 241 aa12.17□□□□□ -0.46
TUBB3-202ENST00000553656 HS3ST5Q8IZT8 346 aa12.17□□□□□ -0.46
TUBB3-202ENST00000553656 SVOPLQ8N434 492 aa12.17□□□□□ -0.46
TUBB3-202ENST00000553656 CLDN22Q8N7P3 220 aa12.17□□□□□ -0.46
TUBB3-202ENST00000553656 OR1K1Q8NGR3 316 aa12.17□□□□□ -0.46
TUBB3-202ENST00000553656 ZNF519Q8TB69 540 aa12.17□□□□□ -0.46
TUBB3-202ENST00000553656 TEX47Q8TBZ9 253 aa12.17□□□□□ -0.46
TUBB3-202ENST00000553656 MAGEE2Q8TD90 523 aaPredicted RBP12.17□□□□□ -0.46
TUBB3-202ENST00000553656 DNAJC9Q8WXX5 260 aa12.17□□□□□ -0.46
TUBB3-202ENST00000553656 HDAC2Q92769 488 aaKnown RBP12.17□□□□□ -0.46
TUBB3-202ENST00000553656 Q96M85 177 aa12.17□□□□□ -0.46
TUBB3-202ENST00000553656 MUS81Q96NY9 551 aa12.17□□□□□ -0.46
TUBB3-202ENST00000553656 ERMAPQ96PL5 475 aaPredicted RBP12.17□□□□□ -0.46
TUBB3-202ENST00000553656 RBP7Q96R05 134 aa12.17□□□□□ -0.46
TUBB3-202ENST00000553656 NIPSNAP1Q9BPW8 284 aa12.17□□□□□ -0.46
TUBB3-202ENST00000553656 EGLN3Q9H6Z9 239 aa12.17□□□□□ -0.46
TUBB3-202ENST00000553656 NTN4Q9HB63 628 aa12.17□□□□□ -0.46
TUBB3-202ENST00000553656 AMDHD2Q9Y303 409 aa12.17□□□□□ -0.46
TUBB3-202ENST00000553656 IER3IP1Q9Y5U9 82 aa12.17□□□□□ -0.46
TUBB3-202ENST00000553656 FREM1Q5H8C1 2179 aa12.17□□□□□ -0.46
TUBB3-202ENST00000553656 PTPN13Q12923 2485 aa12.16□□□□□ -0.46
TUBB3-202ENST00000553656 COL12A1Q99715 3063 aa12.16□□□□□ -0.46
TUBB3-202ENST00000553656 H3BN98 237 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms