RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 PRR23D1E9PI22 279 aaPredicted RBP4.48□□□□□ -1.69
VTI1B-202ENST00000553619 E9PQ18 207 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 PLPP3O14495 311 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 XKRYO14609 159 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 CDC42EP2O14613 210 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 GPR171O14626 319 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 TLX2O43763 284 aaPredicted RBP4.48□□□□□ -1.69
VTI1B-202ENST00000553619 EFNA2O43921 213 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 GLSO94925 669 aaPredicted RBP4.48□□□□□ -1.69
VTI1B-202ENST00000553619 SOX14O95416 240 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 BCL10O95999 233 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 RENP00797 406 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 CD14P08571 375 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 RPSAP08865 295 aaKnown RBP4.48□□□□□ -1.69
VTI1B-202ENST00000553619 HOXD4P09016 255 aaPredicted RBP4.48□□□□□ -1.69
VTI1B-202ENST00000553619 TSPAN19P0C672 248 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 RFPL3SP0C7P2 107 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 PRR23D2P0DMB1 279 aaPredicted RBP4.48□□□□□ -1.69
VTI1B-202ENST00000553619 ZNF24P17028 368 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 ZNF3P17036 446 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 ZNF43P17038 809 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 POU3F2P20265 443 aaPredicted RBP4.48□□□□□ -1.69
VTI1B-202ENST00000553619 ENPP1P22413 925 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 AHCYP23526 432 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 EEF1B2P24534 225 aaKnown RBP4.48□□□□□ -1.69
VTI1B-202ENST00000553619 MST1P26927 711 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 ACVR2AP27037 513 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 GRPRP30550 384 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 SFTPDP35247 375 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 POLR2IP36954 125 aaKnown RBP4.48□□□□□ -1.69
VTI1B-202ENST00000553619 AQP2P41181 271 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 GUCA1AP43080 201 aaPredicted RBP4.48□□□□□ -1.69
VTI1B-202ENST00000553619 MAGEA5P43359 124 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 PCYT1AP49585 367 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 DIO1P49895 249 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 DAP3P51398 398 aaKnown RBP4.48□□□□□ -1.69
VTI1B-202ENST00000553619 AGFG1P52594 562 aaKnown RBP4.48□□□□□ -1.69
VTI1B-202ENST00000553619 BLVRAP53004 296 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 RAP1BP61224 184 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 RPL27P61353 136 aaKnown RBP4.48□□□□□ -1.69
VTI1B-202ENST00000553619 ISL1P61371 349 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 RAP1AP62834 184 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 LTBQ06643 244 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 PUDPQ08623 228 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 DBPQ10586 325 aaPredicted RBP4.48□□□□□ -1.69
VTI1B-202ENST00000553619 MYBPHQ13203 477 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 C1DQ13901 141 aaKnown RBP4.48□□□□□ -1.69
VTI1B-202ENST00000553619 ZNF239Q16600 458 aaKnown RBP4.48□□□□□ -1.69
VTI1B-202ENST00000553619 PGGHGQ32M88 737 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 C6orf141Q5SZD1 244 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 ARMC4Q5T2S8 1044 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 TMEM236Q5W0B7 351 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 C12orf73Q69YU5 71 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 HBMQ6B0K9 141 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 ACSM5Q6NUN0 579 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 PAQR6Q6TCH4 344 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 SLC46A3Q7Z3Q1 461 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 PXKQ7Z7A4 578 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 JAZF1Q86VZ6 243 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 KIF18BQ86Y91 864 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 GID4Q8IVV7 300 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 CHERPQ8IWX8 916 aaKnown RBP4.48□□□□□ -1.69
VTI1B-202ENST00000553619 UEVLDQ8IX04 471 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 MCEMP1Q8IX19 187 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 ZNF786Q8N393 782 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 LRRC17Q8N6Y2 441 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 TCEANCQ8N8B7 351 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 EXD3Q8N9H8 876 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 TEX19Q8NA77 164 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 OR2V1Q8NHB1 315 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 C9orf43Q8TAL5 461 aaPredicted RBP4.48□□□□□ -1.69
VTI1B-202ENST00000553619 NEIL3Q8TAT5 605 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 TMEM163Q8TC26 289 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 IPCEF1Q8WWN9 437 aaPredicted RBP4.48□□□□□ -1.69
VTI1B-202ENST00000553619 EXTL1Q92935 676 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 MYDGFQ969H8 173 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 PNPLA2Q96AD5 504 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 INTS12Q96CB8 462 aaKnown RBP4.48□□□□□ -1.69
VTI1B-202ENST00000553619 ARL5BQ96KC2 179 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 ADAD1Q96M93 576 aaKnown RBP4.48□□□□□ -1.69
VTI1B-202ENST00000553619 RBP7Q96R05 134 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 SNX18Q96RF0 628 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 GPX7Q96SL4 187 aaPredicted RBP4.48□□□□□ -1.69
VTI1B-202ENST00000553619 GPA33Q99795 319 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 ZNF747Q9BV97 191 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 SF3B5Q9BWJ5 86 aaKnown RBP4.48□□□□□ -1.69
VTI1B-202ENST00000553619 HES7Q9BYE0 225 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 PRRG4Q9BZD6 226 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 OR11A1Q9GZK7 315 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 DEFB127Q9H1M4 99 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 TXNIPQ9H3M7 391 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 EGLN3Q9H6Z9 239 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 ZNF703Q9H7S9 590 aaPredicted RBP4.48□□□□□ -1.69
VTI1B-202ENST00000553619 ZDHHC11Q9H8X9 412 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 VCX3AQ9NNX9 186 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 CCNB1IP1Q9NPC3 277 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 NRIP3Q9NQ35 241 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 CMC2Q9NRP2 79 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 TAS2R5Q9NYW4 299 aa4.48□□□□□ -1.69
VTI1B-202ENST00000553619 ZNF346Q9UL40 294 aaKnown RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms